prot_Ecto-sp9_F_contig1046.438.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig1046.438.1
Unique Name	prot_Ecto-sp9_F_contig1046.438.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	681

Homology

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BLAST of mRNA_Ecto-sp9_F_contig1046.438.1 vs.
Match: Reverse (transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLZ7_9PHAE)

HSP 1 Score: 727 bits (1876), Expect = 2.500e-251
Identity = 447/537 (83.24%), Postives = 460/537 (85.66%), Query Frame = 0

Query:   75 MLAEKLQEASTHISELRTVLRQEVRRREAAEAEVSEAQGYLKSSRQELGELRHLAWKLEQMGRNSFAHMDGNSQAVRHLEGELHARGMAGTVGGEEAGRGANREEEREHGRSLPSGGWARGRSEGGGKEEAGLPCARRRSVPQALSSWKGGQRLFLAALAGLRAELRCVNTQLGKAKAENEEFVRHCTERVAVRVERLERAVRQADRKXXXXXXXXXXXEAAGATDRKSADTLKRVVKGISSILLDRLGVTMPTCLDGGEDVGERGQAEMLERGLEELTAAVTDALSKVKERAKQALPAQPHGDSLAPGDGRHRRSTLDGMVWGERSKDDFNMLAQLQKIEAESELQSLQARLDDMTEKYSRAIADQEIVDSAPLREERERAKQELARAARAHSGVVSALEVTLAAEKSHCQDLRLKLERQTREHQVAQADVDQRLLQTQQELXXXXXXXXXXXXXXXRESARRARLDKKYSELEDRGLVSPRSVXXXXXXXXXXXXXXXXXXVWRPEATTRKFSGESERSQLAQPTVPRPSSVRLV 611
            MLA+KLQEASTHISELRTVLRQEVRRREAAEAEVSEAQG                          FAHMDGNSQAVRHLEGELHARG+AGTVGG EAGRG  REEERE GRS+ SGG ARGRSEGGGKEEAGL CARRR VPQ LSSWKGGQRLFLAALAGLRAELRCVNTQLGKAKAENE FVRHCTERVAVRVERLERAVRQA +K           EAAGA DRKSADTLKRVVKGISSILLDRL VTMPT L GGE+ GERGQ EMLERGLEELTAAVTDALSKVKERAKQA+PAQPHGDSLAPG+GR+  ST+DGMVWGERSKDDFNMLAQLQKIEAES+LQSLQARLDDMTEKYSRAIADQE VDS PLREE+ERAKQELARAARAHSG+VSALEVTLAAEKSHCQDLRLKLERQTREHQVA ADVDQRLLQTQ   XXXXXXXXXXXXXX RE ARRARLDKKYSELEDRGLVSPRSVXXXXXXXX          V RPEATTRKFSGESERSQLAQ T+PRPSSVR V
Sbjct:  374 MLADKLQEASTHISELRTVLRQEVRRREAAEAEVSEAQG--------------------------FAHMDGNSQAVRHLEGELHARGVAGTVGGGEAGRGPLREEEREDGRSMLSGGRARGRSEGGGKEEAGLLCARRRRVPQGLSSWKGGQRLFLAALAGLRAELRCVNTQLGKAKAENEVFVRHCTERVAVRVERLERAVRQAGQKQAEAQRQASEAEAAGAIDRKSADTLKRVVKGISSILLDRLAVTMPTYLRGGEEAGERGQ-EMLERGLEELTAAVTDALSKVKERAKQAVPAQPHGDSLAPGNGRYCMSTVDGMVWGERSKDDFNMLAQLQKIEAESKLQSLQARLDDMTEKYSRAIADQETVDSTPLREEQERAKQELARAARAHSGIVSALEVTLAAEKSHCQDLRLKLERQTREHQVALADVDQRLLQTQXXXXXXXXXXXXXXXXXDRECARRARLDKKYSELEDRGLVSPRSVXXXXXXXX----------VRRPEATTRKFSGESERSQLAQATLPRPSSVRYV 873

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BLAST of mRNA_Ecto-sp9_F_contig1046.438.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4R8_ECTSI)

HSP 1 Score: 490 bits (1261), Expect = 8.220e-161
Identity = 292/343 (85.13%), Postives = 297/343 (86.59%), Query Frame = 0

Query:    1 MSQSLAEAVREQSGLLTETANAKVAAEVLEAKSRAAEVEMARAAGRETARAQAAANDCAPTAINLPDPGWEVDNMLAEKLQEASTHISELRTVLRQEVRRREAAEAEVSEAQGYLKSSRQELGELRHLAWKLEQMGRNSFAHMDGNSQAVRHLEGELHARGMAGTVGGEEAGRGANREEEREHGRSLPSGGWARGRSEGGGKEEAGLPCARRRSVPQALSSWKGGQRLFLAALAGLRAELRCVNTQLGKAKAENEEFVRHCTERVAVRVERLERAVRQADRKXXXXXXXXXXXEAAGATDRKSADTLKRVVKGISSILLDRLGVTMPTCLDGGEDVGERGQAE 343
            MSQSLAEA+REQSGLLTETANAKVAAEVLEAKSRAAEVE                                  NMLAEKLQEASTHISELRTVLRQEVRRREAAEAEVSEAQGYLKSSRQELGELRHLAWKLEQMGRNSFAHMDGNSQAV HLEGELHARG+AGTVGGEEA RGANREEER+HGRSLPSGGWARGRSEGGGKEEAGL CARRRSVPQALSSWKGGQRLFLAALAGLRAELRCVNTQLGKAKAENEEFVRHCTERVAVRVERLERA       XXXXXXXXXXXEAAGATDRKSADTLKRVVKGISSILLDRLGV MPTCLDGGEDVGERG+ +
Sbjct:  356 MSQSLAEAIREQSGLLTETANAKVAAEVLEAKSRAAEVE----------------------------------NMLAEKLQEASTHISELRTVLRQEVRRREAAEAEVSEAQGYLKSSRQELGELRHLAWKLEQMGRNSFAHMDGNSQAVSHLEGELHARGVAGTVGGEEARRGANREEERKHGRSLPSGGWARGRSEGGGKEEAGLLCARRRSVPQALSSWKGGQRLFLAALAGLRAELRCVNTQLGKAKAENEEFVRHCTERVAVRVERLERAXXXXXXXXXXXXXXXXXXEAAGATDRKSADTLKRVVKGISSILLDRLGVAMPTCLDGGEDVGERGEGK 664

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig1046.438.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig1046.438.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Reverse	2.500e-251	83.24	transcriptase domain-containing protein n=1 Tax=Ec...	[more]
Uncharacterized	8.220e-161	85.13	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 233..253
None	No IPR available	COILS	Coil	Coil	coord: 406..440
None	No IPR available	COILS	Coil	Coil	coord: 478..551
None	No IPR available	COILS	Coil	Coil	coord: 87..121
None	No IPR available	COILS	Coil	Coil	coord: 262..301
None	No IPR available	PANTHER	PTHR34491	FAMILY NOT NAMED	coord: 17..441

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig1046	contig	Ecto-sp9_F_contig1046:20075..26145 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig1046.438.1	mRNA_Ecto-sp9_F_contig1046.438.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig1046 19420..26355 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig1046.438.1 ID=prot_Ecto-sp9_F_contig1046.438.1|Name=mRNA_Ecto-sp9_F_contig1046.438.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=681bp
MSQSLAEAVREQSGLLTETANAKVAAEVLEAKSRAAEVEMARAAGRETAR
AQAAANDCAPTAINLPDPGWEVDNMLAEKLQEASTHISELRTVLRQEVRR
REAAEAEVSEAQGYLKSSRQELGELRHLAWKLEQMGRNSFAHMDGNSQAV
RHLEGELHARGMAGTVGGEEAGRGANREEEREHGRSLPSGGWARGRSEGG
GKEEAGLPCARRRSVPQALSSWKGGQRLFLAALAGLRAELRCVNTQLGKA
KAENEEFVRHCTERVAVRVERLERAVRQADRKQAEAQRQASEAEAAGATD
RKSADTLKRVVKGISSILLDRLGVTMPTCLDGGEDVGERGQAEMLERGLE
ELTAAVTDALSKVKERAKQALPAQPHGDSLAPGDGRHRRSTLDGMVWGER
SKDDFNMLAQLQKIEAESELQSLQARLDDMTEKYSRAIADQEIVDSAPLR
EERERAKQELARAARAHSGVVSALEVTLAAEKSHCQDLRLKLERQTREHQ
VAQADVDQRLLQTQQELDEAQQALEQAQFALERESARRARLDKKYSELED
RGLVSPRSVSPRSVSPRPVTPRPVTPRVWRPEATTRKFSGESERSQLAQP
TVPRPSSVRLVLEEARAKLGQETSNDAVGATGIRARQEVKVPAGRQQSVL
NTRGLTLELESSPGDRDGADKSASPSISPL*