prot_Ecto-sp9_F_contig10405.397.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10405.397.1
Unique Nameprot_Ecto-sp9_F_contig10405.397.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length312
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10405.397.1 vs.
Match: CRAL-TRIO (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAB2_9PHAE)

HSP 1 Score: 468 bits (1204), Expect = 3.250e-159
Identity = 261/312 (83.65%), Postives = 271/312 (86.86%), Query Frame = 0 
Query:    1 MTEPVSDSPEERNLRRLVDAINANADAEATAAATPKNGDNGGGTXXXXXXXXXXXFXSPQKKSPKKNGKPSPAQRSPFGKTQPVPASQELCFSPKSGRSRARTNDTATAGGGPRAHSLFPERDLGPRRATWSGSSGRDSAASRVSLPANEGLAVASREDAYPPNTRRIVTDEGGSRRRRELGSGGVGVGAERGVEAERQARERGRGSPAVARLLFREDHHRSEEDAQPIEDRLQAVMRDLGVPLGEQERVVQGGEAREGGGGNGQRADTVTLESAAAVASAEENSLHVQGKQGGGMPALENNGDNSAAGRRT 312
            MTEPVSDSPEERNLRRLVDAINANADAEAT AATPKNGD+GGG  XXXX      F S +K  PKKNGKPS  QRSPFGKTQPVPA+QEL  SPKSGRSRARTND ATAGGGPRAHSL PERDLGPRRATWSGSSGR SAASRV LPANEGL VA REDAY P+TRR+V D+GGSRRRRELGSG VGVGAERGVE ERQ RE GRGSP  ARLL  EDHH+SEEDAQPIEDRLQAVMRDLGVPLGEQERVVQGGEAREG GGNGQRADT  LESAA VA+AE N+L  QG+ GGGMPALENNGDNSAAGRRT
Sbjct:  335 MTEPVSDSPEERNLRRLVDAINANADAEATVAATPKNGDDGGGAKXXXXPTRRPSFRSXEKXXPKKNGKPSSVQRSPFGKTQPVPAAQELHVSPKSGRSRARTNDNATAGGGPRAHSLLPERDLGPRRATWSGSSGRGSAASRVPLPANEGLTVAIREDAYRPHTRRVVADQGGSRRRRELGSGRVGVGAERGVETERQEREGGRGSPPAARLLLGEDHHQSEEDAQPIEDRLQAVMRDLGVPLGEQERVVQGGEAREGAGGNGQRADTGALESAAVVATAEGNNLRSQGQHGGGMPALENNGDNSAAGRRT 646
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10405.397.1 vs.
Match: CRAL-TRIO (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7T8_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 4.310e-27
Identity = 68/90 (75.56%), Postives = 76/90 (84.44%), Query Frame = 0 
Query:  225 DAQPIEDRL--QAVMRDLGVPLGEQERVVQGGEAREGGGGNGQRADTVTLESAAAVASAEENSLHVQGKQGGGMPALENNGDNSAAGRRT 312
            D   ++D +  QAVMRDLGVPLGEQER VQGGE REG GGNGQRA+T TLE+AAAVA+AEENSL VQG+QGGG+PALE NGDNS  GRRT
Sbjct:  316 DLSALQDEIAPQAVMRDLGVPLGEQERAVQGGEEREGAGGNGQRAETGTLEAAAAVAAAEENSLRVQGQQGGGVPALEKNGDNS--GRRT 403
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10405.397.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
CRAL-TRIO3.250e-15983.65domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
CRAL-TRIO4.310e-2775.56domain-containing protein n=1 Tax=Ectocarpus silic... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10405contigEcto-sp9_F_contig10405:3194..4483 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10405.397.1mRNA_Ecto-sp9_F_contig10405.397.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10405 2320..4483 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10405.397.1 ID=prot_Ecto-sp9_F_contig10405.397.1|Name=mRNA_Ecto-sp9_F_contig10405.397.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=312bp
MTEPVSDSPEERNLRRLVDAINANADAEATAAATPKNGDNGGGTKGGGRP
TRRPSFRSPQKKSPKKNGKPSPAQRSPFGKTQPVPASQELCFSPKSGRSR
ARTNDTATAGGGPRAHSLFPERDLGPRRATWSGSSGRDSAASRVSLPANE
GLAVASREDAYPPNTRRIVTDEGGSRRRRELGSGGVGVGAERGVEAERQA
RERGRGSPAVARLLFREDHHRSEEDAQPIEDRLQAVMRDLGVPLGEQERV
VQGGEAREGGGGNGQRADTVTLESAAAVASAEENSLHVQGKQGGGMPALE
NNGDNSAAGRRT
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