prot_Ecto-sp9_F_contig10370.360.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10370.360.1
Unique Nameprot_Ecto-sp9_F_contig10370.360.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length262
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10370.360.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRJ5_ECTSI)

HSP 1 Score: 488 bits (1256), Expect = 1.670e-173
Identity = 251/262 (95.80%), Postives = 255/262 (97.33%), Query Frame = 0 
Query:    1 RGYDDADFDTRPRRRRSRDGIDAEPVPTGWDTAQWFSGAQEANQGGLYEWARSFYNTLFWYGGASSEDEDELPAMNFQDLLERFDLPAGEQSSARPRPIVPPEDLAAEQDFRWRPSGREATAGATAAAEGTNRSRAKGRGSTVSGGATGSTRRRARREREERDLDWESVGRPEREMRAAGGRGRREGRDDGDVVAIGQLRRKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSRGGSENDTDVLQTIRRDHV 262
            RGYDDADFDTRPRRRRSRDGIDAEPVPTGWDTAQWFSGAQEANQGGLYEWARSFYNTLFWYGGASSEDEDELPAMNFQDLLERFDLPAGEQSS RPRPIVPPEDLAAEQDF W+PSGREAT GATAAAEGTNRSR+K RGSTVSGGAT STRRRARREREERDLDWE+VGR EREMRAAGGRGRREGRDDGDVVAIGQLRRKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSRGGSE DTDVLQT+RRDHV
Sbjct:   19 RGYDDADFDTRPRRRRSRDGIDAEPVPTGWDTAQWFSGAQEANQGGLYEWARSFYNTLFWYGGASSEDEDELPAMNFQDLLERFDLPAGEQSSTRPRPIVPPEDLAAEQDFLWQPSGREATGGATAAAEGTNRSRSKDRGSTVSGGATRSTRRRARREREERDLDWENVGRAEREMRAAGGRGRREGRDDGDVVAIGQLRRKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSRGGSETDTDVLQTMRRDHV 280
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BLAST of mRNA_Ecto-sp9_F_contig10370.360.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5V9_9PHAE)

HSP 1 Score: 464 bits (1194), Expect = 5.350e-160
Identity = 241/259 (93.05%), Postives = 244/259 (94.21%), Query Frame = 0 
Query:    1 RGYDDADFDTRPRRRRSRDGIDAEPVPTGWDTAQWFSGAQEANQGGLYEWARSFYNTLFWYGGASSEDEDELPAMNFQDLLERFDLPAGEQSSARPRPIVPPEDLAAEQDFRWRPSGREATAGATAAAEGTNRSRAKGRGSTVSGGATGSTRRRARREREERDLDWESVGRPEREMRAAGGRGRREGRDDGDVVAIGQLRRKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSRGGSENDTDVLQTIRR 259
            R YDDAD DTRPRRRRSRD IDAEPVPTGWDTAQWF+GAQEANQGGLYEWARSFYNTLFWYGGASSE EDELPAMNFQDLLERFDLPAGEQSSARPRPIVPPEDLAAEQDFRWRPSGREAT GATA AE TN SRAKGRGST SGGATGS+RRRARRER+ERDLDWESVGR EREM AAGGRGRREG DDGDVVAIGQLRRKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSRGGSE DTDVLQ  RR
Sbjct:  171 RSYDDADVDTRPRRRRSRDDIDAEPVPTGWDTAQWFTGAQEANQGGLYEWARSFYNTLFWYGGASSEGEDELPAMNFQDLLERFDLPAGEQSSARPRPIVPPEDLAAEQDFRWRPSGREATGGATATAESTNWSRAKGRGSTASGGATGSSRRRARRERDERDLDWESVGRAEREMHAAGGRGRREGGDDGDVVAIGQLRRKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSRGGSETDTDVLQAKRR 429
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10370.360.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.670e-17395.80protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.350e-16093.05protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10370contigEcto-sp9_F_contig10370:926..3207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10370.360.1mRNA_Ecto-sp9_F_contig10370.360.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10370 926..3207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10370.360.1 ID=prot_Ecto-sp9_F_contig10370.360.1|Name=mRNA_Ecto-sp9_F_contig10370.360.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=262bp
RGYDDADFDTRPRRRRSRDGIDAEPVPTGWDTAQWFSGAQEANQGGLYEW
ARSFYNTLFWYGGASSEDEDELPAMNFQDLLERFDLPAGEQSSARPRPIV
PPEDLAAEQDFRWRPSGREATAGATAAAEGTNRSRAKGRGSTVSGGATGS
TRRRARREREERDLDWESVGRPEREMRAAGGRGRREGRDDGDVVAIGQLR
RKQRQLAEREHKCEVDLEKVRDRLDVVDATVELWMRRSAGMLSRGGSEND
TDVLQTIRRDHV
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