prot_Ecto-sp9_F_contig10316.324.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10316.324.1
Unique Nameprot_Ecto-sp9_F_contig10316.324.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length90
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10316.324.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGZ6_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 3.220e-29
Identity = 56/81 (69.14%), Postives = 61/81 (75.31%), Query Frame = 0 
Query:    6 NVKAKARWWCSSDTSCPASNLEFHRHPFDNDLEKCHDFVLETGIELCLVHASREEADRRTRRVRKVQATENHLSAAMARGG 86
            + + KARWWC S T C ASNLE HRHPF NDL+KCHDFVLETGI+LCLVH SREEAD  TRR    +A E    AAMARGG
Sbjct:    8 DARNKARWWCPSGTKCSASNLELHRHPFGNDLKKCHDFVLETGIQLCLVHVSREEADNETRRALNARAKEPPPPAAMARGG 88
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10316.324.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized3.220e-2969.14protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10316contigEcto-sp9_F_contig10316:2075..3247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10316.324.1mRNA_Ecto-sp9_F_contig10316.324.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10316 2075..3247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10316.324.1 ID=prot_Ecto-sp9_F_contig10316.324.1|Name=mRNA_Ecto-sp9_F_contig10316.324.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=90bp
MCRCRNVKAKARWWCSSDTSCPASNLEFHRHPFDNDLEKCHDFVLETGIE
LCLVHASREEADRRTRRVRKVQATENHLSAAMARGGEDIR
back to top