mRNA_Ecto-sp9_F_contig103.305.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig103.305.1 vs.
Match: Histone (deacetylase family protein, plastidal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0C2_ECTSI) HSP 1 Score: 761 bits (1966), Expect = 3.160e-276 Identity = 378/393 (96.18%), Postives = 384/393 (97.71%), Query Frame = 1
Query: 1 MKLSHVRLLAVGCSARAWHRSAPLPNSAAFPCGGGIRFSRRGNRYSTSMSRGRRRPTAVGTGFDTGLQGSQQDEVQNRGGEGKLKIIYDEVFLKHRPPPGHPHPECPARVSTARSELDRLEGIEWATPSSLRSEKRRERTLAAIERVHNPEYLEEVLRVCAKGGGAADFDTYICPDTFEVCIAASSAWIDAVESAAGGSPAFALARPPGHHATAGVGMGFCLVCFAAVAAFHALDALGCGRVAMLDFDVHHGNGVAALVKGDARIRYCSIHQGGIFPGSGGAEDSGPLGNLKHLPFFGVDETWETYEPRFEEAVKWLEEFKPDLVLVSAGYDALEADELATASLQPKDYGRMGKRLKEVFGSKVAFGLEGGYNLQVTPVAIRATMEPFLCAGA 1179
MKLSHVRLLA+GCSARAWHRSAPLPNSAAF CGGGIRFS RGNRYSTSMSRGRRRPTAVGTG DT LQGSQQDEVQNR GEGKLKIIYDEVFLKHRPPPGHPHPECPARVSTARSELDRLEGIEWATPSSL+SEK RERTLAAIERVHNPEYLEEVLRVCAKGGGAADFDTYICPDTFEVCIAASSAW+DAVESAAGGSPAFALARPPGHHATAGVGMGFCLVCFAAVAAFHALDALGCGRVA+LDFDVHHGNGVAALVKGDARIRYCSIHQGGIFPGSGGAEDSGPLGNLKHL FFGVDETWETYEPRFEEAV+WL EF PDLVLVSAGYDALEADELATASLQPKDYGRMGKRLKEVFGSKVAFGLEGGYNLQVTPVAIRAT+EPFLCAGA
Sbjct: 1 MKLSHVRLLAIGCSARAWHRSAPLPNSAAFSCGGGIRFSWRGNRYSTSMSRGRRRPTAVGTGLDTELQGSQQDEVQNRDGEGKLKIIYDEVFLKHRPPPGHPHPECPARVSTARSELDRLEGIEWATPSSLQSEKGRERTLAAIERVHNPEYLEEVLRVCAKGGGAADFDTYICPDTFEVCIAASSAWMDAVESAAGGSPAFALARPPGHHATAGVGMGFCLVCFAAVAAFHALDALGCGRVAILDFDVHHGNGVAALVKGDARIRYCSIHQGGIFPGSGGAEDSGPLGNLKHLQFFGVDETWETYEPRFEEAVEWLAEFMPDLVLVSAGYDALEADELATASLQPKDYGRMGKRLKEVFGSKVAFGLEGGYNLQVTPVAIRATVEPFLCAGA 393
BLAST of mRNA_Ecto-sp9_F_contig103.305.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEW7_9PHAE) HSP 1 Score: 484 bits (1246), Expect = 1.570e-168 Identity = 258/345 (74.78%), Postives = 264/345 (76.52%), Query Frame = 1
Query: 145 MSRGRRRPTAVGTGFDTGLQGSQQDEVQNRGGEGKLKIIYDEVFLKHRPPPGHPHPECPARVSTARSELDRLEGIEWATPSSLRSEKRRERTLAAIERVHNPEYLEEVLRVCAKGGGAADFDTYICPDTFEVCIAASSAWIDAVESAAGGSPAFALARPPGHHATAGVGMGFCLVCFAAVAAFHALDALGCGRVAMLDFDVHHGNGVAALVKGDARIRYCSIHQGGIFPGSGGAEDSGPLGNLKHLPFFGVDETWETYEPRFEEAVKWLEEFKPDLVLVSAGYDALEADELATASLQPKDYGRMGKRLKEVFGSKVAFGLEGGYNLQVTPVAIRATMEPFLCAGA 1179
M RG RPTAVG SQQDEVQNRGGEGKLKIIY EVFLKHRPPPGHPHPECPARVSTAR ELD+LEGIEWATPSSLRSEK RER LAAIERVHNPEYLEEV RVCAKGGGAADFDTYICPDTFEVCIAA+SAW+DA ESAAGGSPAFALARPPGHHATAGVGMG SGGAED GPLGNLKHLPFFGVDETWETYEPRFEEAVKWLEEF+PD+VLVSAGYDALEADELATASLQPKDY RMG RLKEVFG KVAFGLEGGYNLQVTPVAIRAT+EPFLCAGA
Sbjct: 1 MPRGLPRPTAVG---------SQQDEVQNRGGEGKLKIIYGEVFLKHRPPPGHPHPECPARVSTARIELDQLEGIEWATPSSLRSEKGRERALAAIERVHNPEYLEEVRRVCAKGGGAADFDTYICPDTFEVCIAAASAWMDAAESAAGGSPAFALARPPGHHATAGVGMG-----------------------------------------------------------SGGAEDIGPLGNLKHLPFFGVDETWETYEPRFEEAVKWLEEFEPDMVLVSAGYDALEADELATASLQPKDYERMGIRLKEVFGRKVAFGLEGGYNLQVTPVAIRATIEPFLCAGA 277
BLAST of mRNA_Ecto-sp9_F_contig103.305.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT75_9STRA) HSP 1 Score: 305 bits (782), Expect = 2.130e-97 Identity = 151/310 (48.71%), Postives = 220/310 (70.97%), Query Frame = 1
Query: 244 GKLKIIYDEVFLKHRPPPGHPHPECPARVSTARSELDRLEGIEWATPSSLRSEKRRERTLAAIERVHNPEYLEEVLRVCAKGGGAADFDTYICPDTFEVCIAASSAWIDAVESAAG-GSPAFALARPPGHHATAGVGMGFCLVCFAAVAAFHALDALGCGRVAMLDFDVHHGNGVAALVKGDARIRYCSIHQGGIFPGSGGAEDSGPLGNLKHLPFFGVDETWETYEPRFEE-AVKWLEEFKPDLVLVSAGYDALEADELATASLQPKDYGRMGKRLKEVFGSKVAFGLEGGYNLQVTPVAIRATMEPFL 1167
G+++IIY + FL+H+ HP ECP R+ +L ++GI+W TP+S S++R + L I++VH+P+Y+EE+ ++ +GGG D+DTY+ +T+EV + A+ AW+DAV+SA G+PAFAL RPPGHHA G GMGFC+ FAA+AA +A + R+A+LD+DVHHGNGV L+K D R+RYCS+H+ G FPGSG A D GP+GNL ++P + W+ Y+P+FEE A+ +L+EF PDL+++SAGYD ++ DEL+ LQP+D+ M +KE FG +V +GLEGGYN+ A+ AT+ P+L
Sbjct: 30 GQVRIIYSDKFLEHKDTTYHP--ECPDRLKWTVPKLKSIQGIDWRTPTSSYSKEREQLALEYIKKVHDPDYVEEIQKLSGQGGGRLDYDTYVNAETYEVAVLAACAWLDAVDSAVKEGTPAFALTRPPGHHALRGTGMGFCIFNFAAIAARYACEHHSLARIALLDWDVHHGNGVQYLLKEDERMRYCSLHEEGNFPGSGRANDQGPIGNLLNIPLPPYTK-WDMYKPQFEEKAIPFLKEFDPDLLIISAGYDGMDEDELSYMRLQPEDFNVMSAFVKERFGKRVIWGLEGGYNVHELHKAVGATISPYL 336
BLAST of mRNA_Ecto-sp9_F_contig103.305.1 vs.
Match: Hist_deacetyl (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0V1_9STRA) HSP 1 Score: 290 bits (741), Expect = 8.470e-91 Identity = 158/317 (49.84%), Postives = 209/317 (65.93%), Query Frame = 1
Query: 247 KLKIIYDEVFLKHRPPPGHPHPECPARVSTARSELDRLEGIEWATPSSLRSEKRR-ERTLAAIERVHNPEYLEEVLRVCAKGGGAADFDTYICPDTFEVCIAASSAWIDAVESAAG-GSPAFALARPPGHHATAGVGMGFCLVCFAAVAAFHALDALGCGRVAMLDFDVHHGNGVAALVKGDARIRYCSIHQGGIFPGSGGAE-DSGPLGNLKHLP-----FFGVDETW-ETYEPRF-EEAVKWLEEFKPDLVLVSAGYDALEADELATASLQPKDYGRMGKRLKEVFGSKVAFGLEGGYNLQVTPVAIRATMEPFL 1167
++K+IYDE +H H ECPAR + A L + GI P++ + ++ + A+ RVH Y+E++ + +GGG DFDTY+ DT++VC+ A+SAW+DAV+SA G+PAFAL RPPGHHAT MGFC FA AA +ALD LG RVA+LDFDVH GNGVAA+ + DAR+RYCS+H+ G FP +G E GP NL+ L F G TW E+YE RF EEA+ WL EF P L++VSAGYDALEAD LAT ++QP++Y + + L+ FG+KV FGLEGGY ++ T AI T++PFL
Sbjct: 53 RVKVIYDESHTRHAA--RSDHSECPARATVAADLLQGVAGIGMVAPAAASGDADALDKVMRALHRVHKDWYIEDIAAMSRRGGGNVDFDTYVTKDTYDVCVRATSAWLDAVDSAVTHGTPAFALTRPPGHHATPMAAMGFCFFNFAGAAAMYALDELGLERVALLDFDVHFGNGVAAVARQDARLRYCSLHEAGSFPFTGTEELAGGPHKNLRQLEVQPQYFGGGKGTWAESYEKRFKEEALPWLVEFDPQLLIVSAGYDALEADPLATLTMQPENYREIAQLLRGAFGNKVVFGLEGGYAVEETACAIHMTLQPFL 367
BLAST of mRNA_Ecto-sp9_F_contig103.305.1 vs.
Match: Hypothetical (protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8J4_9STRA) HSP 1 Score: 267 bits (682), Expect = 3.410e-82 Identity = 147/311 (47.27%), Postives = 203/311 (65.27%), Query Frame = 1
Query: 256 IIYDEVFLKHRPPPGHPHPECPARVSTARSEL---DRLEGIEWATPSSLRSEKRRERTLAAIERVHNPEYLEEVLRVCAKGGGAADFDTYICPDTFEVCIAASSAWIDAV----ESAAGGSPAFALARPPGHHATAGVGMGFCLVCFAAVAAFHALDAL-GCGRVAMLDFDVHHGNGVAALVKGDARIRYCSIHQGGIFPGSGGAEDSGPLGNLKHLPFFGVDETWETYEPRFEEAV-KWLEEFKPDLVLVSAGYDALEADELATASLQPKDYGRMGKRLKEVFG-SKVAFGLEGGYNLQVTPVAIRATME 1158
++Y L HR P HP ECP RVS R L D +EW P+ S + R I+ VH EYL E+ C +GGG+ D DTY+ +F+ +AA++ W++AV E G P+FALARPPGHHAT GMGFCL+ AAVAA +ALD G RVA+LDFDVHHGNG+ ++ + D RI YCS+H+GGIFP +G A D G GN+ ++P D W YE + ++AV +L++ KPDLV++SAGYDAL++DELA+ +L+P+DYG++ K++ G +V GLEGGYNL+ TP+A+ A+++
Sbjct: 42 VVYTPKVLLHRAPAAHP--ECPERVSGIREHLLSQDAKVKLEWVEPALEASSEAMRRLRGVIDEVHWDEYLRELQLRCERGGGSIDHDTYLNEHSFDGALAATACWVEAVRRTLERQEG--PSFALARPPGHHATRSQGMGFCLINHAAVAARYALDYCDGVERVAILDFDVHHGNGIESIARKDPRIFYCSVHEGGIFPFTGAASDRGVHGNILNVPVV-ADANWPVYEAKLDKAVLPFLQDAKPDLVIISAGYDALDSDELASVALRPEDYGKIMKKVVSAIGRERVVLGLEGGYNLRDTPLAVEASLQ 347
BLAST of mRNA_Ecto-sp9_F_contig103.305.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6D0_9STRA) HSP 1 Score: 253 bits (646), Expect = 9.460e-77 Identity = 147/315 (46.67%), Postives = 195/315 (61.90%), Query Frame = 1
Query: 247 KLKIIYDEVFLKHRPPPGHPHPECPARVSTARSELDRLEG----IEWATPSSLRSEKRRERTLAAIERVHNPEYLEEVLRVCAKGGGAADFDTYICPDTFEVCIAASSAWIDAV----ESAAGGSPAFALARPPGHHATAGVGMGFCLVCFAAVAAFHALDAL-GCGRVAMLDFDVHHGNGVAALVKGDARIRYCSIHQGGIFPGSGGAEDSGPLGNLKHLPFF-GVDETWETYEPRFEEAVK-WLEEFKPDLVLVSAGYDALEADELATASLQPKDYGRMGKRLKEVFGS-KVAFGLEGGYNLQVTPVAIRATM 1155
++ + Y L HRPP G HPECP RVS+ D L+G ++W P+ + + R I+ VH EYL+E+ C +GGG D DTY+ P+++E +A ++ W++AV E AG P FALARPPGHHA GMGFCL+ AVAA +AL G RVA+ D+DVHHGNGV +L + + + Y SIHQ FP SG A D G L NL ++P G D W YE + + AV +L EF PDLV++SAGYDAL+ DE+A +LQP DYG++ + FGS K+ GLEGGYNL+VTP A+ AT+
Sbjct: 47 RVGVAYSPAVLGHRPPGGRYHPECPERVSSIH---DHLKGGGMDLDWVEPALDGASEDMRRVREIIDEVHWDEYLKELRMRCERGGGQLDEDTYLGPESYESVVAGTACWVEAVRRTVERRAG--PTFALARPPGHHAPRSQGMGFCLINHCAVAARYALKYCEGVERVAIFDWDVHHGNGVESLFRREPNVCYASIHQANAFPFSGEASDRGMLKNLLNVPVAEGSD--WAVYEDKVDNAVMPFLSEFNPDLVIISAGYDALDDDEMAGCALQPADYGKLMDKFVAAFGSDKIVLGLEGGYNLEVTPKAVEATL 354
BLAST of mRNA_Ecto-sp9_F_contig103.305.1 vs.
Match: Histone (deacetylase superfamily n=1 Tax=Crinalium epipsammum PCC 9333 TaxID=1173022 RepID=K9VWN8_9CYAN) HSP 1 Score: 238 bits (607), Expect = 1.270e-71 Identity = 131/311 (42.12%), Postives = 191/311 (61.41%), Query Frame = 1
Query: 250 LKIIYDEVFLKHRPPPGHPHPECPARVSTARSELDRL---EGIEWATPSSLRSEKRRERTLAAIERVHNPEYLEEVLRVCAKGGGAADFDTYICPDTFEVCIAASSAWIDAVESA-AGGSPAFALARPPGHHATAGVGMGFCLVCFAAVAAFHALDALGCGRVAMLDFDVHHGNGVAALVKGDARIRYCSIHQGGIFPGSGGAEDSGPLGNLKHLPFFGVDETWETYEPRFEEAV-KWLEEFKPDLVLVSAGYDALEADELATASLQPKDYGRMGKRLKEVFGSKVAFGLEGGYNLQVTPVAIRATMEPFL 1167
L +IY + FL H+ G HPE P R++ L + IEW P+ L + + + +++VH+ Y+E V R+ GGG+ D DT + P ++++ + A SAW+D V+ A +PAF L+RPPGHHA GMGFCL AA+AA++ALD G RVA+LD+DVHHGNG A+V+ D RI YCS+HQ +PG+G A + G N+ +LP E Y+P FE+ + +L+ F+PDL++VSAGYDA AD LA +LQP+DYG + ++ ++ FGLEGGY+L ++ T++P L
Sbjct: 2 LPVIYSDEFLNHKT--GRFHPERPERLTAIVEALKAAPWADQIEWQIPTPLVTRQ----VMPLLQQVHSQSYIETVARIAQSGGGSLDADTAVSPQSYDIALLAISAWLDGVDRVLANNNPAFVLSRPPGHHAERNTGMGFCLFSNAAIAAYYALDQQGINRVAILDWDVHHGNGTQAIVETDPRIAYCSLHQSPCYPGTGKANEQGKHHNVLNLPL-SPGSNIEVYQPLFEQKIIPFLKNFQPDLLIVSAGYDATAADPLAGMALQPEDYGLFTEYCLQLT-RRILFGLEGGYDLNSLAQSVLQTIKPCL 304
BLAST of mRNA_Ecto-sp9_F_contig103.305.1 vs.
Match: Hist_deacetyl (domain-containing protein n=1 Tax=Hyella patelloides LEGE 07179 TaxID=945734 RepID=A0A563VIN3_9CYAN) HSP 1 Score: 238 bits (606), Expect = 1.740e-71 Identity = 130/311 (41.80%), Postives = 195/311 (62.70%), Query Frame = 1
Query: 250 LKIIYDEVFLKHRPPPGHPHPECPARVST---ARSELDRLEGIEWATPSSLRSEKRRERTLAAIERVHNPEYLEEVLRVCAKGGGAADFDTYICPDTFEVCIAASSAWIDAVESAAG-GSPAFALARPPGHHATAGVGMGFCLVCFAAVAAFHALDALGCGRVAMLDFDVHHGNGVAALVKGDARIRYCSIHQGGIFPGSGGAEDSGPLGNLKHLPFFGVDETWETYEPRF-EEAVKWLEEFKPDLVLVSAGYDALEADELATASLQPKDYGRMGKRLKEVFGSKVAFGLEGGYNLQVTPVAIRATMEPFL 1167
+ +IY E FL+H G+ HPEC AR++ A ++D + +EW +P++ + + I ++H PE+++ V ++ GGG D DT + P ++ V + A SAW+D V+ G+P F LARPPGHHA GMGFCL AA+AA +AL+ G RVA+LD+DVHHGNG A+V+ + I YCS+HQ +PG+G + G N+ +LP T + YEP F ++ V +L++F+PD+V+VSAGYDA D LA+ SL+P DYG + + L+++ SK+ FGLEGGY+L+ ++ AT+ L
Sbjct: 2 ISVIYSEEFLQHNT--GYGHPECAARLTAVVEALKQVDWQDRLEWRSPNTTAARD----VVRQIAKIHTPEHIQRVQQIATTGGGYLDADTIVSPHSYGVALLAVSAWLDGVDLVLNRGNPVFVLARPPGHHALRDRGMGFCLFSNAAIAANYALEQPGVTRVAILDWDVHHGNGTEAIVEDNPHIVYCSLHQSPCYPGTGEGDYDGKQQNILNLPM-NPGSTIKDYEPLFIKKVVPFLQDFQPDIVIVSAGYDANHQDPLASISLKPNDYGLLTQHLRKI-NSKLLFGLEGGYHLEALAQSVVATLASCL 304
BLAST of mRNA_Ecto-sp9_F_contig103.305.1 vs.
Match: Histone (deacetylase n=1 Tax=Kamptonema sp. SIO4C4 TaxID=2607773 RepID=A0A6P0JUY3_9CYAN) HSP 1 Score: 235 bits (600), Expect = 1.450e-70 Identity = 135/309 (43.69%), Postives = 187/309 (60.52%), Query Frame = 1
Query: 256 IIYDEVFLKHRPPPGHPHPECPARVSTARSELDRL---EGIEWATPSSLRSEKRRERTLAAIERVHNPEYLEEVLRVCAKGGGAADFDTYICPDTFEVCIAASSAWIDAVESAAGG-SPAFALARPPGHHATAGVGMGFCLVCFAAVAAFHALDALGCGRVAMLDFDVHHGNGVAALVKGDARIRYCSIHQGGIFPGSGGAEDSGPLGNLKHLPFFGVDETWETYEPRF-EEAVKWLEEFKPDLVLVSAGYDALEADELATASLQPKDYGRMGKRLKEVFGSKVAFGLEGGYNLQVTPVAIRATMEPFL 1167
IIY + FL H+P H HPECP R++ + L + + I+W TP+ + + L +E++H+P+YL V + +GGG D DTYI P++++V + A SAW D V+ +PAF LARPPGHHA A GMGFCL A+AA +AL+ RVA++D+DVHHGNG LV+ + I YCS HQ +PGSG ++G N+ +LP G T + Y+P F E + +L +F+PDL+LVSAG+DA D LA SLQ +DY K L V + FGLEGGY+L P ++ AT+E L
Sbjct: 4 IIYSDRFLDHKP--RHYHPECPERLTAIVNALKSVSWSDRIDWQTPTPVEQRE----VLPWLEKLHSPKYLTLVRTMAERGGGMLDTDTYIAPESYDVALLAVSAWFDGVDRVLSSHNPAFVLARPPGHHAEATTGMGFCLFSNVAIAAHYALEKPNVQRVAIVDWDVHHGNGTQHLVENNPNIAYCSFHQFPCYPGSGRDTETGMYNNILNLPM-GAGSTLKDYQPLFIERVIPFLRQFEPDLLLVSAGFDAHRDDPLAGVSLQSQDYQAFTKMLLPVTRC-ILFGLEGGYDLDALPQSVIATIEGCL 304
BLAST of mRNA_Ecto-sp9_F_contig103.305.1 vs.
Match: Histone (deacetylase superfamily protein n=1 Tax=Calothrix parasitica NIES-267 TaxID=1973488 RepID=A0A1Z4LLS3_9CYAN) HSP 1 Score: 235 bits (600), Expect = 1.960e-70 Identity = 135/306 (44.12%), Postives = 185/306 (60.46%), Query Frame = 1
Query: 256 IIYDEVFLKHRPPPGHPHPECPARVSTARSELDRL---EGIEWATPSSLRSEKRRERTLAAIERVHNPEYLEEVLRVCAKGGGAADFDTYICPDTFEVCIAASSAWIDAVESAA-GGSPAFALARPPGHHATAGVGMGFCLVCFAAVAAFHALDALGCGRVAMLDFDVHHGNGVAALVKGDARIRYCSIHQGGIFPGSGGAEDSGPLGNLKHLPFFGVDETWETYEPRFE-EAVKWLEEFKPDLVLVSAGYDALEADELATASLQPKDYGRMGKRLKEVFGSKVAFGLEGGYNLQVTPVAIRATME 1158
IIY + FL+H G HPE P R+S S L + IEW +P+S+ LA IE +H+P Y+ +V + +GGG D DTY+CP +++V + A +AW+D V+ G PAF L+RPPGHHA MGFCL AA++AF AL RVA+LD+DVHHGNG A+V+ + I YCS+HQ +PG+G A + G N+ +LP D Y+P FE E + +L F+PDL++VSAGYDA D LA +LQP+DYG + +V SK+ FGLEGGY+L ++ AT+E
Sbjct: 8 IIYSDEFLEHLT--GREHPEKPERLSAVVSALKEAAFSQQIEWRSPTSIEENS----PLAVIEEIHSPRYIRKVRDIANEGGGFLDTDTYVCPKSYDVALLAVNAWLDGVDIVLESGKPAFVLSRPPGHHAEIDYAMGFCLFSNAAISAFQALKKPEVNRVAILDWDVHHGNGTQAIVENNPDIAYCSLHQYPCYPGTGKASEHGINNNVLNLPI-PPDSDISIYQPAFEKEVLPFLSNFQPDLLIVSAGYDANADDPLAMINLQPQDYGLFTEYCLKVT-SKILFGLEGGYDLPALSQSVVATVE 305 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig103.305.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig103.305.1 >prot_Ecto-sp9_F_contig103.305.1 ID=prot_Ecto-sp9_F_contig103.305.1|Name=mRNA_Ecto-sp9_F_contig103.305.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=394bp MKLSHVRLLAVGCSARAWHRSAPLPNSAAFPCGGGIRFSRRGNRYSTSMSback to top mRNA from alignment at Ecto-sp9_F_contig103:7847..16031- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig103.305.1 ID=mRNA_Ecto-sp9_F_contig103.305.1|Name=mRNA_Ecto-sp9_F_contig103.305.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=8185bp|location=Sequence derived from alignment at Ecto-sp9_F_contig103:7847..16031- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig103:7847..16031- >mRNA_Ecto-sp9_F_contig103.305.1 ID=mRNA_Ecto-sp9_F_contig103.305.1|Name=mRNA_Ecto-sp9_F_contig103.305.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2364bp|location=Sequence derived from alignment at Ecto-sp9_F_contig103:7847..16031- (Ectocarpus species9 EcSCA_722f female)back to top |