mRNA_Ecto-sp9_F_contig10260.276.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig10260.276.1
Unique NamemRNA_Ecto-sp9_F_contig10260.276.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10260.276.1 vs.
Match: Kinesin-like (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNA3_ECTSI)

HSP 1 Score: 642 bits (1656), Expect = 2.110e-223
Identity = 448/479 (93.53%), Postives = 448/479 (93.53%), Query Frame = 1 
Query:    1 QKNATSDLFDQLGQMPGGGSLSVHVSFFEIYGGRCQDLLNHRHRCVVREDGKGEVVIAGLQEKEAMDAEGLEEFIADGNRNRTTHATESNDQSSRSHAICQICVRDVSNGRLYGKLSLIDLAGSERGADTKSHNRQRRMEGADINKSLLALKECIRALDSDSVHVPYRASKLTLVLKDSFTRKAARTVMIATVSPGASAADHTINTLRYADRVKENKVEQFKPVANAGPAGAGXXXXXXXXXXXXXXXXXXXVSPTPCAGGACGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGGLGVQRNPSEFKSPSSQKAGVGAGEMAPDSSSRWAAAQAKVGXXXXXXXXXXXXXXLATPAKKVPSYGGGRYQRGSSASDGKRSSLLQRPTSEYAQETSNLRGLRGKGVGXXXXXXXXXXXXXXXXXXXXXEMAXXXXXMESAGSDTASAASDINYMHESLRQYHPEEGCDEEGEGGV 1437
            QKNATSDLFDQLGQMPGGGSLSVHVSFFEIYGGRCQDLLNHRHRCVVREDGKGEVVIAGLQEKEAMDAEGLEEFIADGNRNRTTHATESNDQSSRSHAICQICVRDVSNGRLYGKLSLIDLAGSERGADTKSHNRQRRMEGADINKSLLALKECIRALDSDSVHVPYRASKLTLVLKDSFTRKAARTVMIATVSPGASAADHTINTLRYADRVKENKVEQFKPVANAGPAGA XXXXXXXXXXXXXXXXXXX              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LGVQRNPSEFKSPSS KAGVGAGEMAPDSSSRWAAAQ    XXXXXXXXXXXXXXLA PAKKVPSYGGGRYQRGSSASDGKRSSLLQRPTSEYAQETSNLRGLRGKGV       XXXXXXXXXXXXXXXEMAXXXXXMESAGSDTASAASDINYMHESLRQYHPEEGCDEEGEGGV
Sbjct:  183 QKNATSDLFDQLGQMPGGGSLSVHVSFFEIYGGRCQDLLNHRHRCVVREDGKGEVVIAGLQEKEAMDAEGLEEFIADGNRNRTTHATESNDQSSRSHAICQICVRDVSNGRLYGKLSLIDLAGSERGADTKSHNRQRRMEGADINKSLLALKECIRALDSDSVHVPYRASKLTLVLKDSFTRKAARTVMIATVSPGASAADHTINTLRYADRVKENKVEQFKPVANAGPAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--LGVQRNPSEFKSPSSHKAGVGAGEMAPDSSSRWAAAQXXXXXXXXXXXXXXXXXXLAIPAKKVPSYGGGRYQRGSSASDGKRSSLLQRPTSEYAQETSNLRGLRGKGV-------XXXXXXXXXXXXXXXEMAXXXXXMESAGSDTASAASDINYMHESLRQYHPEEGCDEEGEGGV 652
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10260.276.1 vs.
Match: Kinesin-like (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D754_HETAK)

HSP 1 Score: 310 bits (794), Expect = 2.770e-100
Identity = 162/219 (73.97%), Postives = 180/219 (82.19%), Query Frame = 1 
Query:    1 QKNATSDLFDQLGQMPGGGSLSVHVSFFEIYGGRCQDLLNHRHRCVVREDGKGEVVIAGLQEKEAMDAEGLEEFIADGNRNRTTHATESNDQSSRSHAICQICVRDVSNGRLYGKLSLIDLAGSERGADTKSHNRQRRMEGADINKSLLALKECIRALDSDSVHVPYRASKLTLVLKDSFTRKA-ARTVMIATVSPGASAADHTINTLRYADRVKENKV 654
            Q+  T DLF+ +   P G  L V V+FFEIYGGRCQDLLN RHR  VREDG+GEV I  LQE    DA  LE ++  GNRNRTTHATE ND SSRSHA+CQI +R+V +GRL GK+SLIDLAGSERGADTKSHNRQRRME A+INKSLLALKECIRALDS+  H+PYRASKLTLVLKDSFT K+ ARTVMIATV+P AS+ADHTINTLRYADRVKE KV
Sbjct:   14 QEYVTRDLFEAMAAHPRGARLQVSVAFFEIYGGRCQDLLNRRHRLQVREDGQGEVQIVDLQEMPCEDAAALEAYVQRGNRNRTTHATEKNDVSSRSHAVCQIALREVGSGRLQGKISLIDLAGSERGADTKSHNRQRRMESAEINKSLLALKECIRALDSNDTHIPYRASKLTLVLKDSFTNKSSARTVMIATVAPNASSADHTINTLRYADRVKEKKV 232
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10260.276.1 vs.
Match: Kinesin-like (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJB8_9STRA)

HSP 1 Score: 312 bits (800), Expect = 3.560e-97
Identity = 164/203 (80.79%), Postives = 178/203 (87.68%), Query Frame = 1 
Query:   58 SLSVHVSFFEIYGGRCQDLLNHRHRCVVREDGKGEVVIAGLQEKEAMDAEGLEEFIADGNRNRTTHATESNDQSSRSHAICQICVRDVSNG-RLYGKLSLIDLAGSERGADTKSHNRQRRMEGADINKSLLALKECIRALDSDSVHVPYRASKLTLVLKDSFTRKAARTVMIATVSPGASAADHTINTLRYADRVKENKVEQF 663
            +L V+VSFFEIYGGRCQDLLN RHR  VREDG+G+V IAGL+E +A  AE LE+ I  GNRNRTTHATESND SSRSHAICQI +++   G RL+GKLSLIDLAGSERGADTKSHNRQRRMEGA+INKSLLALKECIRALDS   HVPYRASKLTLVLKDSFTR+AARTVMIATVSPGAS ADHT+NTLRYADRVKE KV  F
Sbjct:  196 TLEVYVSFFEIYGGRCQDLLNRRHRLDVREDGQGDVHIAGLEEFQAASAEELEQLIDRGNRNRTTHATESNDTSSRSHAICQIALKEAGGGGRLHGKLSLIDLAGSERGADTKSHNRQRRMEGAEINKSLLALKECIRALDSGEAHVPYRASKLTLVLKDSFTRRAARTVMIATVSPGASHADHTLNTLRYADRVKETKVADF 398
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10260.276.1 vs.
Match: Kinesin-like (protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7UCQ1_9STRA)

HSP 1 Score: 300 bits (769), Expect = 4.200e-90
Identity = 162/240 (67.50%), Postives = 185/240 (77.08%), Query Frame = 1 
Query:    1 QKNATSDLFDQLGQM------PGGGSLSVHVSFFEIYGGRCQDLLNHRHRCVVREDGKGEVVIAGLQEKEAMDAEGLEEFIADGNRNRTTHATESNDQSSRSHAICQICVRDVSNGRLYGKLSLIDLAGSERGADTKSHNRQRRMEGADINKSLLALKECIRALDSDS-VHVPYRASKLTLVLKDSFTRKAARTVMIATVSPGASAADHTINTLRYADRVKENKVEQFKPVANAGPAGAG 699
            Q+    D+F  L Q       PGG  L V+VS+FEIYGGRCQDLLNHRH+ +VREDGKG+VVI  L EKEA   E L   I +GNRNRTTHATE ND SSRSHAICQ+ +RD  +G+L+GKLSL+DLAGSERGADTKSH RQRR+E A+INKSLLALKECIRALD+    HVPYRASKLTLVLKD FT++ ARTVMIATVSP AS+ADHT+NTLRYADRVK+ K E F    +    G G
Sbjct:  240 QQQVVVDVFAHLSQAHATQQAPGG--LGVYVSYFEIYGGRCQDLLNHRHKLLVREDGKGDVVIGELSEKEASSEEELWRLIEEGNRNRTTHATEVNDVSSRSHAICQVLLRDQDSGKLWGKLSLVDLAGSERGADTKSHCRQRRLESAEINKSLLALKECIRALDAGGGTHVPYRASKLTLVLKDCFTKEKARTVMIATVSPNASSADHTLNTLRYADRVKQKKAEDFHNSGSGSSVGKG 477
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10260.276.1 vs.
Match: Kinesin-like (protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BU83_9STRA)

HSP 1 Score: 275 bits (704), Expect = 7.650e-84
Identity = 144/202 (71.29%), Postives = 164/202 (81.19%), Query Frame = 1 
Query:   64 SVHVSFFEIYGGRCQDLLNHRHRCVVREDGKGEVVIAGLQEKEAMDAEGLEEFIADGNRNRTTHATESNDQSSRSHAICQICVRDVSNGRLYGKLSLIDLAGSERGADTKSHNRQRRMEGADINKSLLALKECIRALDSDS--VHVPYRASKLTLVLKDSFTRKAARTVMIATVSPGASAADHTINTLRYADRVKENKVEQF 663
            +V VSF+E+YGGRCQDLLN R    + EDGKGEVV+ GL+E EA + E L   +  GNR RTTHATE+ND SSRSHA+CQI +RD +NGRL GKLSL+DLAGSERG+DTKSHNRQRR E A+INKSLLALKECIRALD+     HVPYR+SKLTLVLKD FT   ART M+ATVSPGAS+ DHTINTLRYADRVKE K E +
Sbjct:  268 TVTVSFYELYGGRCQDLLNERRMLKILEDGKGEVVVTGLEEFEAENPEELMCLVEKGNRLRTTHATEANDTSSRSHAVCQIALRDKNNGRLKGKLSLVDLAGSERGSDTKSHNRQRRTESAEINKSLLALKECIRALDNGGGQSHVPYRSSKLTLVLKDCFTSPLARTTMVATVSPGASSCDHTINTLRYADRVKEKKSETY 469
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10260.276.1 vs.
Match: Kinesin-like (protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5B6_9STRA)

HSP 1 Score: 277 bits (709), Expect = 2.210e-83
Identity = 148/229 (64.63%), Postives = 173/229 (75.55%), Query Frame = 1 
Query:   13 TSDLFDQLGQMPGGGSLS---VHVSFFEIYGGRCQDLLNHRHRCVVREDGKGEVVIAGLQEKEAMDAEGLEEFIADGNRNRTTHATESNDQSSRSHAICQICVRDVSNGRLYGKLSLIDLAGSERGADTKSHNRQRRMEGADINKSLLALKECIRALDSDSVHVPYRASKLTLVLKDSFTRKAARTVMIATVSPGASAADHTINTLRYADRVKENKVEQFKPVANAGPA 690
            + D+F  L     G +L    V VSFFEIYGGR QDLLN R R  V EDGKGEVV+ GL+E EA D + L ++I    + RTTHATE+ND SSRSHAICQI +R+  +G+L GK+SL+DLAGSERG+DTKSHNRQRR E ++IN SLLALKECIRAL   S HVPYRASKLTL+LKD FT   ART MIATVSPG S+ADHTINTLRY+DR+KE K+ + KP  N  PA
Sbjct:  200 SEDIFSLLSTNSEGPNLDNTMVLVSFFEIYGGRIQDLLNKRERLKVLEDGKGEVVVTGLREFEANDPQHLLDYIESAQKKRTTHATEANDTSSRSHAICQIMLREKESGKLRGKMSLVDLAGSERGSDTKSHNRQRRTESSEINTSLLALKECIRALGGSSKHVPYRASKLTLILKDCFTSSLARTAMIATVSPGGSSADHTINTLRYSDRIKEKKIPESKPRKNRPPA 428
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10260.276.1 vs.
Match: Kinesin-like (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GDD8_9STRA)

HSP 1 Score: 272 bits (695), Expect = 4.400e-83
Identity = 146/232 (62.93%), Postives = 175/232 (75.43%), Query Frame = 1 
Query:    1 QKNATSDLFDQLGQMPGGGSLS----VHVSFFEIYGGRCQDLLNHRHRCVVREDGKGEVVIAGLQEKEAMDAEGLEEFIADGNRNRTTHATESNDQSSRSHAICQICVRDVSNGRLYGKLSLIDLAGSERGADTKSHNRQRRMEGADINKSLLALKECIRALDSD----SVHVPYRASKLTLVLKDSFTRKAARTVMIATVSPGASAADHTINTLRYADRVKENKVEQFKPV 672
            Q  A SDLF  L         S    + VSFFE+YGGR QDLLN+R +  + ED KGE+V+ GL+E EA D   L E I  GN+NRTTHATE+ND SSRSHA+CQI +RD S+ +L GKLSL+DLAGSERG+DTKSHNRQRR E ++INKSLLALKECIRALDS+    S HVPYRASKLTL+LKD FT   A++ MI TVSPGAS+ADHT+N+LRYADR+KE KV+  + +
Sbjct:   26 QSMAVSDLFSLLESNENASCNSDNTFITVSFFELYGGRIQDLLNNREKLKLLEDAKGEIVVTGLEEFEANDTAELMELIDTGNKNRTTHATEANDTSSRSHAVCQIVLRDKSSSKLRGKLSLVDLAGSERGSDTKSHNRQRRTESSEINKSLLALKECIRALDSNGRGNSTHVPYRASKLTLILKDCFTSNMAKSTMITTVSPGASSADHTLNSLRYADRIKEKKVKPAEKI 257
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10260.276.1 vs.
Match: Kinesin-like (protein n=8 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY43_9STRA)

HSP 1 Score: 275 bits (702), Expect = 2.830e-81
Identity = 144/199 (72.36%), Postives = 163/199 (81.91%), Query Frame = 1 
Query:   64 SVHVSFFEIYGGRCQDLLNHRHRCVVREDGKGEVVIAGLQEKEAMDAEGLEEFIADGNRNRTTHATESNDQSSRSHAICQICVRDVSNGRLYGKLSLIDLAGSERGADTKSHNRQRRMEGADINKSLLALKECIRALDSDS--VHVPYRASKLTLVLKDSFTRKAARTVMIATVSPGASAADHTINTLRYADRVKENKV 654
            +V VSF+E+YGGRCQDLLN R    + EDGKGEVV+ GL+E EA + E L   +  GNR RTTHATE+ND SSRSHA+CQI +RD +NGRL GKLSL+DLAGSERG+DTKSHNRQRR E A+INKSLLALKECIRALD+     HVPYR+SKLTLVLKD FT   ART M+ATVSPGAS+ DHTINTLRYADRVKE KV
Sbjct:  268 TVTVSFYELYGGRCQDLLNERRMLKILEDGKGEVVVTGLEEFEAENPEELMCLVEKGNRLRTTHATEANDTSSRSHAVCQIALRDKNNGRLKGKLSLVDLAGSERGSDTKSHNRQRRTESAEINKSLLALKECIRALDNGGGQSHVPYRSSKLTLVLKDCFTSPLARTTMVATVSPGASSCDHTINTLRYADRVKEKKV 466
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10260.276.1 vs.
Match: Kinesin-like (protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VNB5_9STRA)

HSP 1 Score: 263 bits (671), Expect = 2.520e-79
Identity = 140/221 (63.35%), Postives = 169/221 (76.47%), Query Frame = 1 
Query:    1 QKNATSDLFDQLGQMPGGGSLS---VHVSFFEIYGGRCQDLLNHRHRCVVREDGKGEVVIAGLQEKEAMDAEGLEEFIADGNRNRTTHATESNDQSSRSHAICQICVRDVSNGRLYGKLSLIDLAGSERGADTKSHNRQRRMEGADINKSLLALKECIRALDSDSVHVPYRASKLTLVLKDSFTRKAARTVMIATVSPGASAADHTINTLRYADRVKENKV 654
            Q     DL+  L     G SL    V V+FFEIYGG  QDLLN+R R  V EDG+GE+V+ GL+E EA DA    E +  GN +RTTHATE+ND SSRSHAICQ+ +RD  + +L GKLSL+DLAGSERG+DT++HN QRR E A+IN SLL+LKECIRALD+ + HVPYRASKLTL+LKD FT + A+T MIATVSPG+S+ADHT+NTLRYADR+KE KV
Sbjct:   53 QDMVAEDLYLLLATGENGCSLDDTIVTVAFFEIYGGFVQDLLNNRKRLKVLEDGRGEIVVTGLEEFEARDAAKFLEMVESGNDSRTTHATEANDTSSRSHAICQVLLRDKISNKLRGKLSLVDLAGSERGSDTRAHNSQRRNESAEINTSLLSLKECIRALDNKNTHVPYRASKLTLILKDCFTSRNAKTSMIATVSPGSSSADHTLNTLRYADRIKEKKV 273
[Close]
BLAST of mRNA_Ecto-sp9_F_contig10260.276.1 vs.
Match: Kinesin-like (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N7H4_9STRA)

HSP 1 Score: 267 bits (682), Expect = 3.960e-79
Identity = 153/242 (63.22%), Postives = 172/242 (71.07%), Query Frame = 1 
Query:    1 QKNATSDLFDQLGQMPGGG--------SLSVHVSFFEIYGGRCQDLLNHRHRCVVREDGKGEVVIAGLQEKEAMDAEGLEEFIADGNRNRTTHATESNDQSSRSHAICQICVRDVSNGRLYGKLSLIDLAGSERGADTKSHNRQRRMEGADINKSLLALKECIRALDS---DSVHVPYRASKLTLVLKDSFTRKAARTVMIATVSPGASAADHTINTLRYADRVKENKVEQF----KPVANA 681
            Q    +DLFD L    GGG          +V V+FFEIYGGR QDLLN R R  + EDGKGEVV+AGL+E  A   +     +  GN  RTTHATE+ND SSRSHAICQI +RD    RL GKLSL+DLAGSERG DTKSHNRQRR E ++IN SLLALKECIRALDS    + HVPYRASKLTL+LKD FT K ART MIATVSPGAS+ADHT+NTLRYADR+KE KV       +PV  A
Sbjct:  197 QSMVAADLFDILHH--GGGVSNSCTLEDTAVTVTFFEIYGGRIQDLLNERKRLKLLEDGKGEVVVAGLEEFGATTPDEFFSLVDVGNGKRTTHATEANDTSSRSHAICQILLRDKGTSRLRGKLSLVDLAGSERGTDTKSHNRQRRTESSEINTSLLALKECIRALDSGRGSARHVPYRASKLTLILKDCFTSKLARTTMIATVSPGASSADHTVNTLRYADRIKEKKVRDMSVTDQPVVKA 436
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10260.276.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Kinesin-like2.110e-22393.53protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNA3... [more]
Kinesin-like2.770e-10073.97protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Kinesin-like3.560e-9780.79protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Kinesin-like4.200e-9067.50protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
Kinesin-like7.650e-8471.29protein n=2 Tax=Corethron hystrix TaxID=216773 Rep... [more]
Kinesin-like2.210e-8364.63protein n=2 Tax=Chaetoceros debilis TaxID=122233 R... [more]
Kinesin-like4.400e-8362.93protein n=1 Tax=Proboscia inermis TaxID=420281 Rep... [more]
Kinesin-like2.830e-8172.36protein n=8 Tax=Corethron hystrix TaxID=216773 Rep... [more]
Kinesin-like2.520e-7963.35protein n=1 Tax=Grammatophora oceanica TaxID=21045... [more]
Kinesin-like3.960e-7963.22protein n=2 Tax=Odontella aurita TaxID=265563 RepI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10260contigEcto-sp9_F_contig10260:80..4023 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score652.9
Seed ortholog evalue1.2e-184
Seed eggNOG ortholog2880.D8LNA3
KEGG koko:K10393
EggNOG free text desc.microtubule motor activity
EggNOG OGsCOG5059@1,KOG0246@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04812
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionKinesin motor domain
Ec32 orthologEc-04_004590.1
Exons7
Model size1437
Cds size1437
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928223.2057152-CDS-Ecto-sp9_F_contig10260:79..2041622928223.2057152-CDS-Ecto-sp9_F_contig10260:79..204Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10260 80..204 +
1692277801.600362-CDS-Ecto-sp9_F_contig10260:79..2041692277801.600362-CDS-Ecto-sp9_F_contig10260:79..204Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10260 80..204 +
1622928223.2791603-CDS-Ecto-sp9_F_contig10260:573..7321622928223.2791603-CDS-Ecto-sp9_F_contig10260:573..732Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10260 574..732 +
1692277801.6129088-CDS-Ecto-sp9_F_contig10260:573..7321692277801.6129088-CDS-Ecto-sp9_F_contig10260:573..732Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10260 574..732 +
1622928223.303673-CDS-Ecto-sp9_F_contig10260:892..10641622928223.303673-CDS-Ecto-sp9_F_contig10260:892..1064Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10260 893..1064 +
1692277801.6308494-CDS-Ecto-sp9_F_contig10260:892..10641692277801.6308494-CDS-Ecto-sp9_F_contig10260:892..1064Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10260 893..1064 +
1622928223.3175433-CDS-Ecto-sp9_F_contig10260:1552..17311622928223.3175433-CDS-Ecto-sp9_F_contig10260:1552..1731Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10260 1553..1731 +
1692277801.6493351-CDS-Ecto-sp9_F_contig10260:1552..17311692277801.6493351-CDS-Ecto-sp9_F_contig10260:1552..1731Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10260 1553..1731 +
1622928223.330219-CDS-Ecto-sp9_F_contig10260:2166..24891622928223.330219-CDS-Ecto-sp9_F_contig10260:2166..2489Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10260 2167..2489 +
1692277801.661001-CDS-Ecto-sp9_F_contig10260:2166..24891692277801.661001-CDS-Ecto-sp9_F_contig10260:2166..2489Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10260 2167..2489 +
1622928223.3457205-CDS-Ecto-sp9_F_contig10260:3021..32071622928223.3457205-CDS-Ecto-sp9_F_contig10260:3021..3207Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10260 3022..3207 +
1692277801.6699593-CDS-Ecto-sp9_F_contig10260:3021..32071692277801.6699593-CDS-Ecto-sp9_F_contig10260:3021..3207Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10260 3022..3207 +
1622928223.3661385-CDS-Ecto-sp9_F_contig10260:3730..40231622928223.3661385-CDS-Ecto-sp9_F_contig10260:3730..4023Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10260 3731..4023 +
1692277801.6792817-CDS-Ecto-sp9_F_contig10260:3730..40231692277801.6792817-CDS-Ecto-sp9_F_contig10260:3730..4023Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10260 3731..4023 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10260.276.1prot_Ecto-sp9_F_contig10260.276.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig10260 80..4023 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig10260.276.1

>prot_Ecto-sp9_F_contig10260.276.1 ID=prot_Ecto-sp9_F_contig10260.276.1|Name=mRNA_Ecto-sp9_F_contig10260.276.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=479bp
QKNATSDLFDQLGQMPGGGSLSVHVSFFEIYGGRCQDLLNHRHRCVVRED
GKGEVVIAGLQEKEAMDAEGLEEFIADGNRNRTTHATESNDQSSRSHAIC
QICVRDVSNGRLYGKLSLIDLAGSERGADTKSHNRQRRMEGADINKSLLA
LKECIRALDSDSVHVPYRASKLTLVLKDSFTRKAARTVMIATVSPGASAA
DHTINTLRYADRVKENKVEQFKPVANAGPAGAGGGGGGRASPIDHPPPPP
SSVSPTPCAGGACGSGSAGGAAGYSSQSKALERRQAASAGAGGGGGGGGL
GGLGVQRNPSEFKSPSSQKAGVGAGEMAPDSSSRWAAAQAKVGPGGGGPS
ASASGSGLATPAKKVPSYGGGRYQRGSSASDGKRSSLLQRPTSEYAQETS
NLRGLRGKGVGGGGGGARAMGGGGGRAEAPTPEMAGGGGGMESAGSDTAS
AASDINYMHESLRQYHPEEGCDEEGEGGV
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mRNA from alignment at Ecto-sp9_F_contig10260:80..4023+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig10260.276.1 ID=mRNA_Ecto-sp9_F_contig10260.276.1|Name=mRNA_Ecto-sp9_F_contig10260.276.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3944bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10260:80..4023+ (Ectocarpus species9 EcSCA_722f female)
CAGAAAAACGCCACGAGTGATCTGTTCGACCAGCTGGGGCAAATGCCGGG
CGGAGGGTCCCTGAGCGTGCACGTCAGCTTCTTCGAGATTTACGGCGGGC
GGTGCCAGGACCTGCTCAACCACCGGTACGCGAATCATCGCGGCGGCGAC
GGACCGGGGGCTCCGTGTTTGTCTATTGCTCGGAGGCGGCCGTAGCTTTG
ATGGTTTATTCCTTGTAGTTGTTTGGATGCTGCCTTGGGGTTGACATTTT
TGCTCGTCTGGGATGGTCAAGGCTTGTGCGTGGTGGTAGTAGTCGAAGCG
GTTGTTTGCGTCTGGTCTGGTTTGGTGAGCCGGGCTAGCGAGGACAGGCG
GAGGCCTGTCCGACGTCGTGATTCAAAAGGCTTCTCGACACAGCAACGCC
GAGCCTTTTTCGGTTGTCTGGCCGCTGCACGCCTGACGCGACTGTGATTC
TGACGCGGGCTGCAATCCTCCCGCGGCTGAACCGATCCATTCAGGCATCG
ATGCGTGGTGAGGGAAGACGGGAAGGGCGAGGTGGTGATCGCGGGTTTGC
AGGAGAAGGAGGCCATGGACGCGGAGGGGCTGGAGGAATTCATCGCCGAC
GGCAACCGCAACCGCACCACTCACGCCACGGAAAGCAACGACCAGAGCTC
CAGGTAGGTTTAAATGTTCGGTGGGCGGTATGTTTGGGGTGGTAGCGCGG
GCAGGATGGTCCGGTTGACGCTTGTTGTTCCTCGCACTTGCGTGCACCCA
CCCTCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCTCCTACTCGTCCTAC
TCCCTTGTTACAGATCTCACGCCATCTGCCAGATCTGCGTGCGAGACGTC
TCGAACGGCCGCTTGTACGGCAAGCTTAGCCTCATCGACCTGGCCGGGTC
GGAGAGGGGGGCGGACACCAAGAGCCACAACCGCCAGCGGAGGATGGAGG
GCGCGGATATCAACAAGTCTCTGCTGGCCCTCAAGGTGCGTGTGTTGCGT
GGTGGAGTCCGACGTTCGATTGGACGTGGAGGAGGCTACGGGGGGTGTAC
TCATAGCCGTGCATGCCGTAGTCGTTAGACCGTTGACCTCGCATCATTAC
GACTCCGTTAGGGCTTTGATCAGCCCGAACTCGGGGAGCGGGGAGGGGGA
GGGGGAGGGGGAGCTTGTTCCCAGATTTTTGTTTCGCGCTGAAGATGCGA
ACTGCGGTGGGATAGTCAAAGGGAGGGGGTTTGGGGGGAAGAGCGGCGGT
GTTGGCCCCGTCTTGTAGGTTGTTTTTTTGCTATCGGCCGCGCAGTCCCT
TTATAGATGTACGCCGCGGGGGGGAGAGGGGGGGGGCTTATCCCGTCGGG
AGGCTGTTATGTTGTCGCTCGGTCTTTGACCACGCTCCCCTCTTGGGACT
GGGAGCCTTCCGTAACCTGGTCGCCGCGTCCCCTCGTCTCCGTGTGCAAC
AACCACCCGACGACGCCTGGCAGGAGTGCATCCGCGCCCTCGACAGCGAC
AGCGTGCACGTGCCCTACCGAGCCTCCAAGCTGACGCTGGTCCTCAAGGA
CAGCTTCACCCGCAAGGCGGCCCGCACCGTCATGATCGCCACTGTGTCGC
CGGGGGCCTCCGCAGCCGACCACACCATCAACACCCTGCGCTACGCGGAC
AGGTATTGTAGTGCGTGCAATGCACGGGTGTCAAGTCTTGTCCTCCCACC
GCCGATAACGCGAAAGAGAGCGCTTTCCTCCCAGTGCCAAGACGTCGAGC
CAAGCCAACAGTCACCCAGCGCTACTGCTGTACGCGTTGCGATCATACGC
GGACAACAGAAGCTGATCGATATTCGTTGGTGGCTACGTAAGTACGTATG
TACGTTCCGTGTAAAAGCTGCTGTTGTGTGCTGTGTTCACGAAGAAAACA
CGAGGTGTATTTTTCATAATGAGGGAGGGAGATGTGGTCCGCAGAGGGAA
GAACGGGTTGCGGCATGACCCCGGTCACGACGTCAGCATCAGCAGCAGCA
ACGGCAGCAGCAGCAGCAGCAGCAACAACGGTAAGAGTTAACGCCTTCCC
CCCCACCCCCGCCTGGTCCCACCCCAACAAACGACAGGGTGAAGGAGAAC
AAGGTGGAGCAGTTCAAGCCCGTGGCCAACGCCGGGCCCGCCGGGGCCGG
GGGCGGGGGCGGCGGCCGCGCGTCCCCCATCGACCACCCGCCACCCCCGC
CTTCCTCGGTCTCACCCACGCCTTGCGCCGGTGGCGCTTGCGGTAGCGGT
AGCGCCGGTGGGGCGGCGGGGTATTCTTCGCAGTCGAAGGCGTTGGAGCG
GCGACAGGCGGCTTCCGCTGGGGCCGGCGGCGGCGGCGGCGGCGGCGGCT
TGGGGGGGTTGGGTGTGCAGCGCAACCCATCCGAGTTTAAGTCGCCGTCC
AGTCAAAAAGGTGAGAAGTGTTACATGTAGAAGGGGGGGGGTTATTGTTT
ATGTGGAAGTAGTGATGGTGATGGGGCGGGAGGTGGTGTTTTGTTTTTCG
CCCGTGCTCTGTTGTAGCGTTTTTTTTTCTTCCAGCTTTTGGTGGGTCTG
TACATGGTTGTTGGGTTTAGGCCCTTTCCTTGCTTTCTCGCAGAAAAGAC
TTGTCCGCCATCTCCGCAGACGAAGAGGGTGTTATTGCTGCGTCCCTTGG
AACAGGGAAACGATCCGTCCAACATCAAAACCGAACCCCCATATTTCTCT
CTGTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGT
GTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGTCTCATTCTATCTCT
CTGTCTCTCTCTCTGCATCTCTTTTCGTGTTCTCTCTCTCTCCCGATTTC
CCCCTCCCTCCACTGTGTGTTCCGTTCTCTGTGTGTGTCTGTCTCTCTGT
TTCTTGTTTCTCACTCCCAATATTTCTTTTGACTATCCCTAGCCGGCGTT
GGTGCTGGAGAGATGGCCCCGGATTCATCCTCCCGCTGGGCGGCGGCTCA
GGCTAAGGTCGGGCCGGGCGGCGGGGGTCCCTCTGCTTCGGCTTCTGGGT
CTGGGCTGGCCACCCCCGCGAAGAAAGTCCCCTCGTACGGAGGGGGCCGC
TACCAGAGGGGATCTTCGGCGTCGGATGGTGAGTGAGACATACACCCACC
TGGCTAAGGTTTTAAAAATAAGCTTACGGGAAAATGGGAGCGTGCCTACA
CGACGCGACTAAATAAGCACTCTTTTATGTATAATTTATTTTTGTGATAA
TACATGTATATATATTTTTTTCAGGACTTTTAAATCAGCGCTCACAAAAC
TTCTGCCGTGTGGGAACTCTAATCCGTGGTCACATATGTAACTACAACCA
AGGAAAGCCTACCCGTCTTTGCAGTCGTCTAGTGCATGGAAAGAAGCCTG
GTGTGGCAAGAGGAAGCTTTCGATGGGTGCGCGTTTTGCCAGCAAGTGTC
GCCGTGTAAATACCCTCGTGAGAACTGCGCGTGCACCCATCTCCCGATCA
TGATTTATCCCCCGCACCCGCCTCTCCCTCTCGAACCCCACCAAGGTGTG
GCAGAGAGGCGGGGTCTACGCAGTTTCGATATTCCAGACTACCCCCACCC
CCATCCCCCGATCATGATCCCCTCGCCTGCCTCTCTCTCGAACCGCACCA
GGGAAACGATCGTCGTTGCTGCAGCGTCCGACGTCAGAGTACGCGCAGGA
GACGAGCAACTTGCGAGGTCTCAGGGGGAAAGGAGTCGGCGGCGGTGGCG
GCGGGGCAAGAGCGATGGGCGGCGGTGGGGGGAGGGCGGAGGCGCCAACC
CCCGAGATGGCCGGGGGCGGCGGCGGGATGGAGAGCGCGGGGTCGGACAC
GGCTTCTGCCGCCTCAGACATCAACTACATGCACGAGTCCCTGCGGCAGT
ACCACCCGGAGGAGGGGTGCGACGAGGAAGGGGAAGGAGGGGTA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10260:80..4023+

>mRNA_Ecto-sp9_F_contig10260.276.1 ID=mRNA_Ecto-sp9_F_contig10260.276.1|Name=mRNA_Ecto-sp9_F_contig10260.276.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2874bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10260:80..4023+ (Ectocarpus species9 EcSCA_722f female)
CAGAAAAACGCCACGAGTGATCTGTTCGACCAGCTGGGGCAAATGCCGGG
CGGAGGGTCCCTGAGCGTGCACGTCAGCTTCTTCGAGATTTACGGCGGGC
GGTGCCAGGACCTGCTCAACCACCGCAGAAAAACGCCACGAGTGATCTGT
TCGACCAGCTGGGGCAAATGCCGGGCGGAGGGTCCCTGAGCGTGCACGTC
AGCTTCTTCGAGATTTACGGCGGGCGGTGCCAGGACCTGCTCAACCACCG
GCATCGATGCGTGGTGAGGGAAGACGGGAAGGGCGAGGTGGTGATCGCGG
GTTTGCAGGAGAAGGAGGCCATGGACGCGGAGGGGCTGGAGGAATTCATC
GCCGACGGCAACCGCAACCGCACCACTCACGCCACGGAAAGCAACGACCA
GAGCTCCAGGCATCGATGCGTGGTGAGGGAAGACGGGAAGGGCGAGGTGG
TGATCGCGGGTTTGCAGGAGAAGGAGGCCATGGACGCGGAGGGGCTGGAG
GAATTCATCGCCGACGGCAACCGCAACCGCACCACTCACGCCACGGAAAG
CAACGACCAGAGCTCCAGATCTCACGCCATCTGCCAGATCTGCGTGCGAG
ACGTCTCGAACGGCCGCTTGTACGGCAAGCTTAGCCTCATCGACCTGGCC
GGGTCGGAGAGGGGGGCGGACACCAAGAGCCACAACCGCCAGCGGAGGAT
GGAGGGCGCGGATATCAACAAGTCTCTGCTGGCCCTCAAGATCTCACGCC
ATCTGCCAGATCTGCGTGCGAGACGTCTCGAACGGCCGCTTGTACGGCAA
GCTTAGCCTCATCGACCTGGCCGGGTCGGAGAGGGGGGCGGACACCAAGA
GCCACAACCGCCAGCGGAGGATGGAGGGCGCGGATATCAACAAGTCTCTG
CTGGCCCTCAAGGAGTGCATCCGCGCCCTCGACAGCGACAGCGTGCACGT
GCCCTACCGAGCCTCCAAGCTGACGCTGGTCCTCAAGGACAGCTTCACCC
GCAAGGCGGCCCGCACCGTCATGATCGCCACTGTGTCGCCGGGGGCCTCC
GCAGCCGACCACACCATCAACACCCTGCGCTACGCGGACAGGAGTGCATC
CGCGCCCTCGACAGCGACAGCGTGCACGTGCCCTACCGAGCCTCCAAGCT
GACGCTGGTCCTCAAGGACAGCTTCACCCGCAAGGCGGCCCGCACCGTCA
TGATCGCCACTGTGTCGCCGGGGGCCTCCGCAGCCGACCACACCATCAAC
ACCCTGCGCTACGCGGACAGGGTGAAGGAGAACAAGGTGGAGCAGTTCAA
GCCCGTGGCCAACGCCGGGCCCGCCGGGGCCGGGGGCGGGGGCGGCGGCC
GCGCGTCCCCCATCGACCACCCGCCACCCCCGCCTTCCTCGGTCTCACCC
ACGCCTTGCGCCGGTGGCGCTTGCGGTAGCGGTAGCGCCGGTGGGGCGGC
GGGGTATTCTTCGCAGTCGAAGGCGTTGGAGCGGCGACAGGCGGCTTCCG
CTGGGGCCGGCGGCGGCGGCGGCGGCGGCGGCTTGGGGGGGTTGGGTGTG
CAGCGCAACCCATCCGAGTTTAAGTCGCCGTCCAGTCAAAAAGGGTGAAG
GAGAACAAGGTGGAGCAGTTCAAGCCCGTGGCCAACGCCGGGCCCGCCGG
GGCCGGGGGCGGGGGCGGCGGCCGCGCGTCCCCCATCGACCACCCGCCAC
CCCCGCCTTCCTCGGTCTCACCCACGCCTTGCGCCGGTGGCGCTTGCGGT
AGCGGTAGCGCCGGTGGGGCGGCGGGGTATTCTTCGCAGTCGAAGGCGTT
GGAGCGGCGACAGGCGGCTTCCGCTGGGGCCGGCGGCGGCGGCGGCGGCG
GCGGCTTGGGGGGGTTGGGTGTGCAGCGCAACCCATCCGAGTTTAAGTCG
CCGTCCAGTCAAAAAGCCGGCGTTGGTGCTGGAGAGATGGCCCCGGATTC
ATCCTCCCGCTGGGCGGCGGCTCAGGCTAAGGTCGGGCCGGGCGGCGGGG
GTCCCTCTGCTTCGGCTTCTGGGTCTGGGCTGGCCACCCCCGCGAAGAAA
GTCCCCTCGTACGGAGGGGGCCGCTACCAGAGGGGATCTTCGGCGTCGGA
TGCCGGCGTTGGTGCTGGAGAGATGGCCCCGGATTCATCCTCCCGCTGGG
CGGCGGCTCAGGCTAAGGTCGGGCCGGGCGGCGGGGGTCCCTCTGCTTCG
GCTTCTGGGTCTGGGCTGGCCACCCCCGCGAAGAAAGTCCCCTCGTACGG
AGGGGGCCGCTACCAGAGGGGATCTTCGGCGTCGGATGGGAAACGATCGT
CGTTGCTGCAGCGTCCGACGTCAGAGTACGCGCAGGAGACGAGCAACTTG
CGAGGTCTCAGGGGGAAAGGAGTCGGCGGCGGTGGCGGCGGGGCAAGAGC
GATGGGCGGCGGTGGGGGGAGGGCGGAGGCGCCAACCCCCGAGATGGCCG
GGGGCGGCGGCGGGATGGAGAGCGCGGGGTCGGACACGGCTTCTGCCGCC
TCAGACATCAACTACATGCACGAGTCCCTGCGGCAGTACCACCCGGAGGA
GGGGTGCGACGAGGAAGGGGAAGGAGGGGTAGGAAACGATCGTCGTTGCT
GCAGCGTCCGACGTCAGAGTACGCGCAGGAGACGAGCAACTTGCGAGGTC
TCAGGGGGAAAGGAGTCGGCGGCGGTGGCGGCGGGGCAAGAGCGATGGGC
GGCGGTGGGGGGAGGGCGGAGGCGCCAACCCCCGAGATGGCCGGGGGCGG
CGGCGGGATGGAGAGCGCGGGGTCGGACACGGCTTCTGCCGCCTCAGACA
TCAACTACATGCACGAGTCCCTGCGGCAGTACCACCCGGAGGAGGGGTGC
GACGAGGAAGGGGAAGGAGGGGTA
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