mRNA_Ecto-sp9_F_contig10251.268.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10251.268.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSE8_ECTSI) HSP 1 Score: 1579 bits (4089), Expect = 0.000e+0 Identity = 899/1022 (87.96%), Postives = 916/1022 (89.63%), Query Frame = 1
Query: 16 KVMMSARLRKILEEALGLTEERERQRDGGAEHHGLTLDGLEGTDRAALEKVQGMGFPADDVLRAVDACPGAEGETLGQRADALLEWLCLHLEEAELPKGFDPRGRNLDVIRPGQNFGTSSNSVSGXXXXXXXXXXXXXXXXXXXXEIAAADSVEGKLLRYGFGHAEVAAAIAGASTEEEENGNESLDARLLRPLKILAGGLVPASARKQXXXXXXX--AAGLDAELMTEEEGREAVDEEVMSLEAIYDGAVAVAPNMPEGAYLLSFDLTNLASLPTKAWLDVWIPQAGGLGGYPSEAPPVALVRGPDLLAAGLLHAAQVALARRTKSLIGNPAVYDILMWALDELPAMLALPATGRAARRKEAAXXXXXXXXXVGYGXXXXXXXXXXXXXXDC-AKGGGEGGVDRSVRPRLPGTEPLWSGGASSLGGGSEGRDRGXXXXXXXXXXXXXXXXXXXXXXXXXXLPPGERKRGREKVEASREFESRRRQRAALPAAKAKAEFLSLARRSQVVLVSGETGCGKTTQIPQFLLEEWEEGGAPGGGPNDLRVLVTQPRRIAAVGVAQRVADERCERLGAGVGYKIRGESKAGPDTRLLFCTTGLLLRRMQGDPRLEELTHLVVDEVHERHLDADFLLALLIGILPKRPKLKVILMSATLDTARFAAYFGGLPGLPGGKTPVLHIPGRTFPVRDLYLEDAIAATGHRPRLKRKQASATPGTTXXXXXXXXXXXXXXXXXXXXXXXAGRPGGLEGPSHWLQEFEEDD--EEELAQQERERGALGGLDMDRVDEDHLDYELLVSLVLYAVSPQGERELGLRGGEEEEVDGDRGVSGSVLVFMPGTMEIDRLCRELEHATEGGQGLCVLPLHGSLPPQRQRAVFDPPPRGKRKVVVSTNIAETSITIPDATVVVDSCRVKEMGYDVARQMPRLQESWASQDSLTQRKGRAGRVREGVSFKLLRRKTFARLPAHGTPEIKRVPLDHLVLQIKALGVEEHPSVVLARALDPPDPKAVQDAVDVLTDLKALGEGA 3066
KVMMSARLRKILEEALGLTEERERQRDGGAEHHGLTLDGLEGTDRAALEKVQGMGFPADDVLRAVDACPG EGETLGQRADALLEWLCLHLEEAELPKGFDPRGRNLDVIRPGQ+FG VAAAIAGAST+EEENG++SLDA LLRPLKILAGGLVPASARKQXXXXXXX AAGLDAELMTEEEGREAVDEEVMSLEAIYDGAVAVAPNMPEGAYLLSFDLTNLASLPTKAWLDVW+PQAGG+GGYPSEAPPVALVRGPDLLAAGLLHAAQVALARR KSLIGNPAVYDILMWALDELPAMLALPATGRAARRKEAAXXXX VGYG XXXXXXX AKGGGEGGVDRSVRPRLPGTEPLWSGGASSLGG RG XXXXXXXXXXX XXXXXXXXXXXXLPPGERKRGREKVEASREFESRRRQRAALPAAKAKAEFLSLARRSQVVLVSGETGCGKTTQIPQFLLEEWEEGG PGGGP+DLRVLVTQPRRIAAVGVAQRVADERCERLGAGVGYKIRGESKAGPDTRLLFCTTGLLLRRMQGDPRLEELTHLVVDEVHERHLDADFLLALLIGILPKRPKLKVILMSATLDTARFAAYFGGLPGLPGGKTPVLHIPGRTFPVRDLYLEDAIAATGHRPRLKRKQASATPGTT XX X AGRPGGL+GP+HWLQEFEE+D +E+L Q+ERERGALGGLDMDRVD+DHL Y+LLVSLVLYAVSPQGERELGLRGGEEE+ GDRGVSGSVLVFMPGTMEIDRLCRELEHATEGGQGL VLPLHGSLPPQRQRAVFDPPPRGKRKVVVSTNIAETSITIPDATVV+DSCRVKEMGYDVARQMPRLQESWASQDSLTQRKGRAGRVREGVSFKLLRRKTFARLPAHGTPEIKRVPLDHLVLQIKALGVEEHPSVVLARALDPPDPKAVQDAVDVLTDLKALGEGA
Sbjct: 256 KVMMSARLRKILEEALGLTEERERQRDGGAEHHGLTLDGLEGTDRAALEKVQGMGFPADDVLRAVDACPGEEGETLGQRADALLEWLCLHLEEAELPKGFDPRGRNLDVIRPGQDFG-------------------------------------------------VAAAIAGASTDEEENGSDSLDAGLLRPLKILAGGLVPASARKQXXXXXXXXXAAGLDAELMTEEEGREAVDEEVMSLEAIYDGAVAVAPNMPEGAYLLSFDLTNLASLPTKAWLDVWVPQAGGVGGYPSEAPPVALVRGPDLLAAGLLHAAQVALARRAKSLIGNPAVYDILMWALDELPAMLALPATGRAARRKEAAXXXXISAS-VGYGSPGVSVAXXXXXXXXXSAKGGGEGGVDRSVRPRLPGTEPLWSGGASSLGGXXXXXXRGGGXXXXXXXXXXXQXXXXXXXXXXXXLPPGERKRGREKVEASREFESRRRQRAALPAAKAKAEFLSLARRSQVVLVSGETGCGKTTQIPQFLLEEWEEGGGPGGGPDDLRVLVTQPRRIAAVGVAQRVADERCERLGAGVGYKIRGESKAGPDTRLLFCTTGLLLRRMQGDPRLEELTHLVVDEVHERHLDADFLLALLIGILPKRPKLKVILMSATLDTARFAAYFGGLPGLPGGKTPVLHIPGRTFPVRDLYLEDAIAATGHRPRLKRKQASATPGTTGGXXDSPAAXPSAKPHEKSGGG-AGRPGGLQGPNHWLQEFEEEDNNKEDLPQRERERGALGGLDMDRVDKDHLHYKLLVSLVLYAVSPQGERELGLRGGEEEDDGGDRGVSGSVLVFMPGTMEIDRLCRELEHATEGGQGLFVLPLHGSLPPQRQRAVFDPPPRGKRKVVVSTNIAETSITIPDATVVLDSCRVKEMGYDVARQMPRLQESWASQDSLTQRKGRAGRVREGVSFKLLRRKTFARLPAHGTPEIKRVPLDHLVLQIKALGVEEHPSVVLARALDPPDPKAVQDAVDVLTDLKALGEGA 1226
BLAST of mRNA_Ecto-sp9_F_contig10251.268.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEH7_THAPS) HSP 1 Score: 380 bits (976), Expect = 5.220e-114 Identity = 230/535 (42.99%), Postives = 307/535 (57.38%), Query Frame = 1
Query: 1474 LPAAKAKAEFLSLARRSQ----VVLVSGETGCGKTTQIPQFLLEEWEEGGAPGGGPNDLRVLVTQPRRIAAVGVAQRVADERCE-RLGAG-VGYKIRGESKAGPDTRLLFCTTGLLLRRMQGDPRLEELTHLVVDEVHERHLDADFLLALLIGILPKRPKLKVILMSATLDTARFAAYFGGLPGLPGGKTPVLHIPGRTFPVRDLYLEDAIAATGHRPRLKRKQASATPGTTXXXXXXXXXXXXXXXXXXXXXXXAGRPGGLEGPSHWLQEFEEDDEEELAQQERERGALGGLD--MDRVDEDHLDYELLVSLVLYAVSPQGERELGLRGGEEEEVDGDRGVSGSVLVFMPGTMEIDRLCRELEHATEGGQGLCVLPLHGSLPPQRQRAVFDPPPRGKRKVVVSTNIAETSITIPDATVVVDSCRVKEMGYDVARQMPRLQESWASQDSLTQRKGRAGRVREGVSFKLLRRKTFARLPAHGTPEIKRVPLDHLVLQIKALGVEEHPSVVLARALDPPDPKAVQDAVDVLTDLKAL 3054
LPAAKAK EFLSL +R+ VVLV+GETGCGKTTQIPQFLLE P +++V QPRR+AA GVA RVA ER E +G G VGY +RG+SK TRLLFCTTG+LLR++Q LE ++H+V+DEVHERHLD D LLA+L LP PKL ++LMSAT+D RFA Y+G TP +HIPG T PV+D LED + T + P R+ D++ ++ +R L L+ + R+DE+ +DY+L+ L++ + + + GS+LVF+PG EIDR + L+ +G L +LPLHG +PP++Q+AVF PP G K+++STN+AETSITIPD T+V+D+C+ K+ +D +MP L E +ASQDSL QR+GRAGRVR G +KL+ R T A+LP HG PEIKR LD +L + LG+E L LDPP +++ A L L A+
Sbjct: 42 LPAAKAKDEFLSLMKRANAKGHVVLVTGETGCGKTTQIPQFLLEN---------DPLGAKIIVAQPRRLAATGVASRVASERGECNVGVGSVGYVVRGDSKVCNSTRLLFCTTGVLLRQLQSQQALENVSHIVIDEVHERHLDTDVLLAILKKTLPSLPKLNIVLMSATMDADRFARYWGT-------DTPRMHIPGFTHPVKDFTLEDVLQLTSYVPPKNRRNYR-------------------------------------------------DDQSSEERTTQRDNLVSLEECLKRIDENEIDYDLIAVLIVRLLKTKDD-------------------DGSILVFLPGAGEIDRAEKALQQIVKGNS-LHILPLHGGIPPEKQQAVFSPPRNGVTKIILSTNVAETSITIPDCTIVIDTCKEKQSSFDPINRMPLLLERFASQDSLKQRRGRAGRVRPGCCYKLISRSTHAKLPKHGEPEIKRCALDQTILSLLFLGLESGSGDFLRLMLDPPSKESINSAFQSLKKLGAV 491
BLAST of mRNA_Ecto-sp9_F_contig10251.268.1 vs.
Match: RNA (helicase n=2 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TGD5_CHLSO) HSP 1 Score: 374 bits (961), Expect = 1.140e-105 Identity = 361/1009 (35.78%), Postives = 491/1009 (48.66%), Query Frame = 1
Query: 151 AALEKVQGMGFPADDVLRAVDACPGAEGETLGQRADALLEWLCLHLEEAELPKGFDP--RGRNLDVIR--PGQNFGTSSNSVSGXXXXXXXXXXXXXXXXXXXXEIAAADSVEGKLLRYGFGHAEVAAAIAGASTEEEENGNESLDARLLRPLKILAGGLVPAS--ARKQXXXXXXXAAGLDAELMTEEEGREAVDEEVMSLEAIYDGAVAVAPNMPEGAYLLSFDLTNLASLPT-------KAWLDVWIPQAGGLGGYPSEAPPVALVRGPDLLAAGLLHAAQVALARRTKSLIGNPAVYDILMWALDELPAMLA--------LPATGRAA---RRKEAAXXXXXXXXXVGYGXXXXXXXXXXXXXXDCAKGGGEGGVDRSVRPRLPGTEPLWSGGASSLGGGSEGRDRGXXXXXXXXXXXXXXXXXXXXXXXXXXLPPGERKRGREKVEASREFESRRRQRAALPAAKAKAEFLSLARRSQVVLVSGETGCGKTTQIPQFLLEEWEEGGAPGGGPNDLRVLVTQPRRIAAVGVAQRVADERCERLGAGVGYK--------IRGESKAGPDTRLLFCTTGLLLRRMQGDPRLEELTHLVVDEVHERHLDADFLLALLIGILP--KRPKLKVILMSATLDTARFAAYFGGLPGLPGGKTPVLHIPGRTFPVRDLYLEDAIAATGHRPRLKRKQASATPGTTXXXXXXXXXXXXXXXXXXXXXXXAGRPGGLEGPSHWLQEFEEDDEEELAQQERERGALGGLDMDRVDEDHLDYELLVSLVLYAVSPQGERELGLRGGEEEEVDGDRGVSGSVLVFMPGTMEIDRLCRELEH-----ATEGGQGLCVLPLHGSLPPQRQRAVFDPPPRGKRKVVVSTNIAETSITIPDATVVVDSCRVKEMGYDVARQMPRLQESWASQDSLTQRKGRAGRVREGVSFKLLRRKTFARLPAHGTPEIKRVPLDHLVLQIKA-LGVEEHPSVVLARALDPPDPKAVQDAVDVLTDLKALG 3057
A E++ +GF D AV A G +DAL +WLC+ L E LPK F P G+ + +IR G + G + G E D +L +YG+ AE AAA+ E+ G + R L +L L A+ A XXXXXXX E EE +LEAIY GA A P+ + L +LT+ A+ + LD P G +APPV +R + A LL + LA++ L G+P VY++ A ++L + L LPA G +A R AA + +G G+D + R + ++K+E+ +E + R R LPAA + E LSL +VV+VSG TGCGK+TQ+PQFLLE+ GG+ G N ++ TQPRRI+AVG+A RVA ER E++G VG +R +SK TRLLFCTTG+LLRR+ GDP L TH+V+DEVHER +++D LL LL G+L + P L+V+LMSAT D FA YF P G+ L IPG T PV D++LEDA+ +TG K A + XXXXXXXXXXXXXXXXXXXXXXX E L+++ E Q R + + +DE ++ +L+ +LV + +S +G+R+ + ++L+F PG EI R+CR L A GG G+ VLPLHG LPP +Q VF+ PP+G K+VVSTN+AETSITI D T V+D+ RVKEM +D AR + RLQE++ SQ + QR+GRAGRVR GV ++L R+T+ R+P PEI R PL LVL +K LG +LA+ + PP+PKA+Q A LT L+ +G
Sbjct: 1154 ALTEELVLLGFGQQDAAAAVAAVGSTSGGA-PSLSDAL-DWLCVRLPEDRLPKNFAPGAAGKPVSIIRRADGGSAGNLGPASRGGSFATGLDAAAEAAEAAAAAEGLLEDPAVAELAQYGYPPAEAAAAL-------EQTGGH-----VQRALAVLHARLAAAATGADGAXXXXXXXXXXXXXXXXXXXAALEEWHEERTALEAIY-GADAAFPSEQHTSLQLPVELTSAAATAAAGGRHELRLQLDFLAPSTAAGGPPYPQAPPVVGLRAEGVPAGALLTLTR-QLAQQAAELAGHPMVYELASAATEQLESCLLRPLPLAQLLPAAGGSAAVSRDGSAADLAQQAEQALRLEDIANTVIPAAGPQRRRRQGAAGSGIDIAAESRRLAEQ-------------------------------------------------------QKKLESGQEHAAMRGVRLRLPAAAKRQEVLSLCASRRVVVVSGATGCGKSTQVPQFLLEQAIAGGS-GAACN---IICTQPRRISAVGLATRVAAERGEQVGGTVGXXXXXXXXXXVRLDSKQSARTRLLFCTTGVLLRRLLGDPALTGTTHVVLDEVHERSIESDLLLLLLRGLLESGRNPGLRVVLMSATADAGLFAGYFEAALREPAGQ---LTIPGFTHPVTDMFLEDALESTGLLIGKVSKWAKRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE-----LRQYSE--------QTR-------ISLSNIDESLVNTDLIEALVAHLLSTRGQRQXXXXXXXXXXXXXXXXXANAILIFAPGADEISRICRTLSSSGRVAAAAGGGGVQVLPLHGGLPPSQQARVFNRPPKGTVKIVVSTNVAETSITIDDVTAVIDTGRVKEMRFDAARGIARLQETFVSQAAAQQRRGRAGRVRPGVCYRLFSRRTWGRMPRDTPPEIARAPLQALVLDVKGILGAAADVPALLAKMITPPEPKALQQA---LTSLRLIG 2061
BLAST of mRNA_Ecto-sp9_F_contig10251.268.1 vs.
Match: p-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FXP5_9STRA) HSP 1 Score: 357 bits (915), Expect = 2.180e-105 Identity = 233/540 (43.15%), Postives = 300/540 (55.56%), Query Frame = 1
Query: 1459 RQRAALPAAKAKAEFLSLARRS-----QVVLVSGETGCGKTTQIPQFLLEEWEEGGAPGGGPNDLRVLVTQPRRIAAVGVAQRVADERCERLG--AGVGYKIRGESKAGPDTRLLFCTTGLLLRRMQGDPRLEELTHLVVDEVHERHLDADFLLALLIGILPKRPKLKVILMSATLDTARFAAYFGGLPGLPGGKTPVLHIPGRTFPVRDLYLEDAIAATGHRP-RLKRKQASATPGTTXXXXXXXXXXXXXXXXXXXXXXXAGRPGGLEGPSHWLQEFEEDDEEELAQQERERGALGGLDMDRVDEDHLDYELLVSLVLYAVSPQGERELGLRGGEEEEVDGDRGVSGSVLVFMPGTMEIDRLCRELEHATEGGQGLCVLPLHGSLPPQRQRAVFDPPPRGKRKVVVSTNIAETSITIPDATVVVDSCRVKEMGYDVARQMPRLQESWASQDSLTQRKGRAGRVREGVSFKLLRRKTFARLPAHGTPEIKRVPLDHLVLQIKALGVEEHPSVVLARALDPPDPKAVQDAVDVLTDLKAL 3054
RQR +LPA KA+ +FL+ S +VVLV+G+TGCGKTTQIPQF+LEE P ++++ QPRR+AA GVA RVADER E A VGY +RG+S DTRLLFCT G+LLR++Q + L+ +TH+V+DEVHER+LD D L+ LL L P LKVILMSATLD RFAAY+G P LHIPGRTFPV+D LED + TG+ P + KRKQ +H + EE + L + + RVD+ +DY LL LV Y V G GS+LVF+ G EI + + +E T+G + +LPLHGSL PQ Q +F P G+ KV++STN+AETSITIPD TVV+DSCR K+ YD +MP L + +AS+ SL QR+GRAGRVR G +KL+ + TF++L H PEI R LD +L + LG E+ L R LDPP +V A L + AL
Sbjct: 3 RQRKSLPAWKARDDFLAKLDESCKSGNRVVLVTGDTGCGKTTQIPQFILEE---------NPTSAKIVIAQPRRLAATGVAGRVADERGEHQAGRASVGYVVRGDSAFCKDTRLLFCTFGILLRQLQSEGALDSITHIVIDEVHERNLDGDILMGLLRKSLKTVPHLKVILMSATLDADRFAAYWG--------NAPRLHIPGRTFPVQDFMLEDVLELTGYNPPKRKRKQGGFN--------------------------------NYHQQNHGSETKEEQPQVSLEDRVK-----------RVDQTSVDYFLLAFLVKYIVQSN-----------------QMGSDGSILVFLQGVGEISQAQKIVESITQG-MSILLLPLHGSLQPQEQSKIFRNTP-GQVKVILSTNVAETSITIPDCTVVIDSCREKQSSYDPINRMPMLLDQFASKASLKQRRGRAGRVRSGKCYKLISKATFSKLNDHTAPEISRCALDQTLLSLLFLGAEDGTGRFLQRLLDPPSQASVNAATSSLQKMGAL 463
BLAST of mRNA_Ecto-sp9_F_contig10251.268.1 vs.
Match: Putative (ATP-dependent RNA helicase DHX57 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISQ8_9FLOR) HSP 1 Score: 357 bits (917), Expect = 6.380e-103 Identity = 249/594 (41.92%), Postives = 339/594 (57.07%), Query Frame = 1
Query: 1390 LPPGERKRGREKVEASR--------------EFESRRRQRAALPAAKAKAEFLSLARRSQVVLVSGETGCGKTTQIPQFLLEEWEEGGAPGGGPNDLRVLVTQPRRIAAVGVAQRVADERCERLGAGVGYKIRGESKAGPDTRLLFCTTGLLLRRMQGDPRLEELTHLVVDEVHERHLDADFLLALLIGILPKRPKLKVILMSATLDTARFAAYFGGLPGLPGG---KTPVLHIPGRTFPVRDLYLEDAIAAT------GHRPRLKR-------KQASATPGTTXXXXXXXXXXXXXXXXXXXXXXXAGRPGGLEG----PSHWLQEFEEDDEEELAQQERERGALGGLDMDRVDEDHLDYELLVSLVLYAVSPQGERELGLRGGEEEEVDGDRGVSGSVLVFMPGTMEIDRLCRELEHATEGGQGLCVLPLHGSLPPQRQRAVFDPPPRGKRKVVVSTNIAETSITIPDATVVVDSCRVKEMGYDVARQMPRLQESWASQDSLTQRKGRAGRVREGVSFKLLRRKTF-ARLPAHGTPEIKRVPLDHLVLQIKALGVEEH----PSVVLARALDPPDPKAVQDAVDVLTDLKAL 3054
LP G + GR+++ R E +++RA LPA KA++E LS +QVV+VSG TG GKTTQIPQFLLEE E P + ++ TQPRRIAA+ VA+RVA ERC+ +G VGY+++ S+ TRL+FCTTG+LLRR+Q DP LE ++H+++DEV+ER + DFL+ +L ILPKR L+VILMSATLD A+FAAYF P + P+ IPGRT+PV +LYLEDA++ G R KR K A G XXXXXXXX G G + P +L + + E++ R A+ L +DE ++++L+ LV R++ L ++ SG++LVF+PG EI L R L G L LPLH L P+ QR VF PPP GKRK++ STNIAETSITI D TVV+D+ RVKE +D L E + S+ + QR GRAGRV +G ++L+RR TF A+L A PEI+R+ L+HLVL + ++ E H P ++A+DPPD +AV A++ L ++ AL
Sbjct: 275 LPEGNDRTGRKEIARKRIHRPVQSDPLKHSPELLEMKKRRAGLPAHKARSEILSKVMNNQVVVVSGATGSGKTTQIPQFLLEEASENRRP------VSIICTQPRRIAAMSVAERVASERCQSVGESVGYQVKLNSRLSRQTRLVFCTTGVLLRRLQSDPHLENVSHVILDEVYERSSETDFLMLILRDILPKRRSLRVILMSATLDAAKFAAYFSSTPSSSSSWKIRVPIAAIPGRTYPVDELYLEDAVSLARYTLKPGDRYARKRGPPSQRGKLAGEVAGVVRDYYARTSATEAAAXXXXXXXXIIGNDSGGDSSEIVPRFYL-DVQHSRVPEVSNFHDYR-AMASL----IDESLVNFDLIDMLV---------RQIVLTTSSDDN-------SGAILVFLPGNSEISTLIRRLSTGP-GSNKLWALPLHSLLSPEDQRKVFKPPPNGKRKLICSTNIAETSITINDVTVVIDTLRVKETSFDPLNGFSVLSECFVSKAAAKQRAGRAGRVSKGTCYRLVRRNTFQAKLAAQQKPEIQRIALEHLVLNVLSIVSESHRENSPYDFFSKAIDPPDKEAVATAINNLINIGAL 839
BLAST of mRNA_Ecto-sp9_F_contig10251.268.1 vs.
Match: Putative (ATP-dependent RNA helicase DHX57 n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHA0_9FLOR) HSP 1 Score: 362 bits (930), Expect = 8.800e-103 Identity = 251/594 (42.26%), Postives = 341/594 (57.41%), Query Frame = 1
Query: 1390 LPPGERKRGREKVEASR--------------EFESRRRQRAALPAAKAKAEFLSLARRSQVVLVSGETGCGKTTQIPQFLLEEWEEGGAPGGGPNDLRVLVTQPRRIAAVGVAQRVADERCERLGAGVGYKIRGESKAGPDTRLLFCTTGLLLRRMQGDPRLEELTHLVVDEVHERHLDADFLLALLIGILPKRPKLKVILMSATLDTARFAAYFGGLPGLPGG---KTPVLHIPGRTFPVRDLYLEDAIAAT------GHRPRLKR-------KQASATPGTTXXXXXXXXXXXXXXXXXXXXXXXAGRPGGLEG----PSHWLQEFEEDDEEELAQQERERGALGGLDMDRVDEDHLDYELLVSLVLYAVSPQGERELGLRGGEEEEVDGDRGVSGSVLVFMPGTMEIDRLCRELEHATEGGQGLCVLPLHGSLPPQRQRAVFDPPPRGKRKVVVSTNIAETSITIPDATVVVDSCRVKEMGYDVARQMPRLQESWASQDSLTQRKGRAGRVREGVSFKLLRRKTF-ARLPAHGTPEIKRVPLDHLVLQIKALGVEEH----PSVVLARALDPPDPKAVQDAVDVLTDLKAL 3054
LP G + GR+++ R E +++RA LPA KA++E LS +QVV+VSG TG GKTTQIPQFLLEE E P + ++ TQPRRIAA+ VA+RVA ERC+ +G VGY+++ S+ TRL+FCTTG+LLRR+Q DP LE ++H+++DEVHER + DFL+ +L ILPKR L+VILMSATLD A+FAAYF P + P++ IPGRT+PV +LYLEDA++ G R KR K A G XXXXXXXX G G + P +L + + E++ R A+ L +DE ++++L+ LV R++ L ++ SG++LVF+PGT EI L R L G L LPLH L P+ QR VF PPP GKRK++ STNIAETSITI D TVV+D+ RVKE +D L E + S+ + QR GRAGRV +G ++L+RR TF A+L A PEI+R+ L+HLVL + ++ E H P ++A+DPPD +AV A++ L ++ AL
Sbjct: 557 LPEGNDRTGRKEIARKRIHRPVQSDPLKHSPELLEMKKRRAGLPAHKARSEILSKVMNNQVVVVSGATGSGKTTQIPQFLLEEASENRRP------VSIICTQPRRIAAMSVAERVASERCQSVGESVGYQVKLNSRLSRQTRLVFCTTGVLLRRLQSDPHLESVSHVILDEVHERSSETDFLMLILRDILPKRRSLRVILMSATLDAAKFAAYFSSTPSSSSSWKIRVPIVAIPGRTYPVDELYLEDAVSLARYTLKPGDRYARKRGPPSQRGKLAGEVAGVVRDYYARTSATEAAAXXXXXXXXIIGNDSGGDSSEIVPRFYL-DVQHSRVPEVSNFHDYR-AMASL----IDESLVNFDLIDMLV---------RQIVLTTSSDDN-------SGAILVFLPGTSEISTLIRRLSTGP-GSNKLWALPLHSLLSPEDQRKVFKPPPNGKRKLICSTNIAETSITINDVTVVIDTLRVKETSFDPLNGFSVLSECFVSKAAAKQRAGRAGRVSKGTCYRLVRRNTFEAKLAAQQKPEIQRIALEHLVLNVLSIVSESHRENSPYDFFSKAIDPPDKEAVATAINNLINIGAL 1121
BLAST of mRNA_Ecto-sp9_F_contig10251.268.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CGQ5_PHYNI) HSP 1 Score: 350 bits (899), Expect = 1.410e-102 Identity = 222/535 (41.50%), Postives = 308/535 (57.57%), Query Frame = 1
Query: 1465 RAALPAAKAKAEFLSLARRSQVVLVSGETGCGKTTQIPQFLLEEWEEGGAPGGGPNDLRVLVTQPRRIAAVGVAQRVADERCERLGAGVGYKIRGESKAGPDTRLLFCTTGLLLRRMQGDPRLEELTHLVVDEVHERHLDADFLLALLIGILPKRPKLKVILMSATLDTARFAAYFGGLPGLPGGKTPVLHIPGRTFPVRDLYLEDAIAATGHRPRLKRKQASATPGTTXXXXXXXXXXXXXXXXXXXXXXXAGRPGGLEGPSHWLQEFEEDDEEELAQQERERGALGGLDMD----RVDEDHLDYELLVSLVLYAVSPQGERELGLRGGEEEEVDGDRGVSGSVLVFMPGTMEIDRLCRELEHATEG-GQGLCVLPLHGSLPPQRQRAVFDPPPRGKRKVVVSTNIAETSITIPDATVVVDSCRVKEMGYDVARQMPRLQESWASQDSLTQRKGRAGRVREGVSFKLLRRKTFARLPAHGTPEIKRVPLDHLVLQIKALGVEEHPSVVLARALDPPDPKAVQDAVDVLTDLKAL 3054
RA LPA K +A+ + + +QVVL+ G TGCGKTTQIPQF+L+E GA G + ++ TQPRRIAA+GVA RVA ERCE + VGY+IR ++K +TRLLFCTTG+LLRR+ D +L ++H++VDEVHER++D DFLL++L +LP+RP L+VILMSAT+++ F YF + P PVL IPG T+PV +LED + T + E P + L+E + ++++ +E ++ AL + + RVD+ +DY+L+V LV + V + + SG++LVF+PGT EI RL L H+ G +C LPLHGSL Q VF P GK KV+VSTNIAETSITI D T V+DS +VKEM YD + +L + WAS+ + QRKGRAGRV+ G ++L RK FA + A + EI RV L+ L LQIK L + L++A++PP+ A+ A+ L D+ A
Sbjct: 41 RAKLPAVKEEAQVIECVQNNQVVLICGATGCGKTTQIPQFILDEHINRGAGG----ECNIICTQPRRIAAIGVATRVAQERCEEIADVVGYQIRMDAKKSANTRLLFCTTGVLLRRLLNDRQLSGVSHVIVDEVHERNVDTDFLLSILRDLLPQRPDLRVILMSATMNSELFVKYFSSITSTP---CPVLDIPGFTYPVECNFLEDVLDQTQY----------------------------------------------EVPKYLLKEKK--NKKDGKDEEEKQKALSEMTSEEIAARVDDSKVDYDLIVHLVRHLVLEKSQ------------------TSGAILVFLPGTAEIKRLIEMLTHSNGGLSAKVCALPLHGSLSGADQAMVFKSAPSGKTKVIVSTNIAETSITINDITAVIDSGKVKEMVYDNRARRSQLLDCWASRAACDQRKGRAGRVQAGTCYRLFSRKRFAAMDAQLSAEIHRVSLEQLCLQIKKLELGSIKGF-LSKAIEPPNEDAIDAAIQELVDIAAF 501
BLAST of mRNA_Ecto-sp9_F_contig10251.268.1 vs.
Match: Uncharacterized (protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BI67_EMIHU) HSP 1 Score: 350 bits (898), Expect = 1.490e-102 Identity = 235/551 (42.65%), Postives = 306/551 (55.54%), Query Frame = 1
Query: 1474 LPAAKAKAEFLSLARRSQVVLVSGETGCGKTTQ-----------------------IPQFLLEEWEEGGAPGGGPNDLRVLVTQPRRIAAVGVAQRVADERCERLGAGVGYKIRGESKAGPDTRLLFCTTGLLLRRMQGDPRLEELTHLVVDEVHERHLDADFLLALLIGILPKRPKLKVILMSATLDTARFAAYFG-GLPGLPGGKTPVLHIPGRTFPVRDLYLEDAIAATGHRPRLKRKQASATPGTTXXXXXXXXXXXXXXXXXXXXXXXAGRPGGLEGPSHWLQEFEEDDEEELAQQERERGALGGLDMDRVDEDHLDYELLVSLVLYAVSPQGERELGLRGGEEEEVDGDRGVSGSVLVFMPGTMEIDRLCRELEHATEGGQGLCVLPLHGSLPPQRQRAVFDPPPRGKRKVVVSTNIAETSITIPDATVVVDSCRVKEMGYDVARQMPRLQESWASQDSLTQRKGRAGRVREGVSFKLLRRKTFARLPAHGTPEIKRVPLDHLVLQIKALGVEEHPSVVLARALDPPDPKAVQDAVDVLTDLKAL 3054
LPAA + E L RR+ V++VSGETGCGKTTQ +PQF+L++ G GG +L TQPRR++A+GVA+RVA ER ER+G VGY+IR ESK DTRLLFCTTG+LLRR+ GD L ++H++VDEVHER L++DFLL +L +L +RP LK++LMSAT++ + FA+YFG G P P P LHIPG T PVR+ +LE+ + TGH+ A G A GG EG Q D++ E + R ++ +DE+ ++ + + +LV + + + E G++LVFMPGT EI L E E G L LPLH L QR VF+ PP G+RKVVVSTN+AETSITI D V+DS RVKE YD Q+P+L E+W SQ S QR+GRAGRVR G F + R+ L A PE+ RVPL L LQIK L + E LARAL+PP AV+ A+ L +L+AL
Sbjct: 24 LPAAAKREEVLEGLRRADVLVVSGETGCGKTTQARRPAHGALSSGARTSPRGTALQVPQFILDDEIAEGR--GGVTS--ILCTQPRRLSAIGVAERVAAERGERIGETVGYQIRLESKRSRDTRLLFCTTGILLRRLHGDGELRGVSHVIVDEVHERSLESDFLLIILRDVLARRPGLKLVLMSATINASLFASYFGAGAP--PPPAAPTLHIPGFTHPVREAFLEEVLERTGHQIEEGGPYARRARG-------------------------AEAAGGTEGLGFAEQAVARDEDGESWSEHVLRS------LETMDEEKVNIDAMAALVSHLDTTRPE--------------------GAILVFMPGTREISALGGEGGGGGEAGARLLPLPLHAGLSSAEQRRVFERPPAGRRKVVVSTNVAETSITIDDVVYVIDSGRVKETRYDAVNQLPQLVETWVSQASRRQRRGRAGRVRPGEYFGMFTRERCGGLAAFTPPEMARVPLHELCLQIKLLELGEI-EPFLARALEPPSEAAVKAAIGQLGELQAL 516
BLAST of mRNA_Ecto-sp9_F_contig10251.268.1 vs.
Match: ATP-dependent (RNA helicase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z9F2_9STRA) HSP 1 Score: 360 bits (924), Expect = 1.910e-102 Identity = 303/974 (31.11%), Postives = 428/974 (43.94%), Query Frame = 1
Query: 157 LEKVQGMGFPADDVLRAVDACPGAEGETLGQRADALLEWLCLHLEEAELPKGFDPRGRNLDVIRPGQNFGTSSNSVSGXXXXXXXXXXXXXXXXXXXXEIAAADSVEGKLLRYGFGHAEVAAAIAGASTEEEENGNESLDARLLRPLKILAGGLVPASARKQXXXXXXXAAGLDAE--LMTEEEGREAVDEEVMSLEAIYDGAVAVAPNMPEGAYLLSFDLTNLASLPTKAWLDVWIPQAGGLGGYPSEAPPVALVRGPDLLAAGLLHAAQVALARRTKSLIGNPAVYDILMWA--LDEL----PAMLALPATGRAARRKEAAXXXXXXXXXVGYGXXXXXXXXXXXXXXDCAKGGGEGGVDRSVRPRLPGTEPLWSGGASSLGGGSEGRDRGXXXXXXXXXXXXXXXXXXXXXXXXXXLPPGERKRGREKVEASREFESRRRQRAALPAAKAKAEFLSLARRSQVVLVSGETGCGKTTQIPQFLLEEWEEGGAPGGGPNDLRVLVTQPRRIAAVGVAQRVADERCERLGAGVGYKIRGESKAGPDTRLLFCTTGLLLRRMQGDPRLEELTHLVVDEVHERHLDADFLLALLIGILPKRPKLKVILMSATLDTARFAAYFGGLPGLPGGKTPVLHIPGRTFPVRDLYLEDAIAATGHRPRLKRKQASATPGTTXXXXXXXXXXXXXXXXXXXXXXXAGRPGGLEGPSHWLQEFEEDDEEELAQQERERGALGGLDMDRVDEDHLDYELLVSLVLYAVSPQGERELGLRGGEEEEVDGDRGVSGSVLVFMPGTMEIDRLCRELEHATEGGQGLCVLPLHGSLPPQRQRAVFDPPPRGKRKVVVSTNIAETSITIPDATVVVDSCRVKEMGYDVARQMPRLQESWASQDSLTQRKGRAGRVREGVSFKLLRRKTFARLPAHGTPEIKRVPLDHLVLQIKALGVEEHPSVVLARALDPPDPKAVQDAVDVLTDLKAL 3054
+ K+Q MGF V C + +A+L+WLCL++ E ELPKGF+P G+ L+ + G + +G + A + +L YGF HA+ AA+ + G E L+ A+ R + A +D + E+ +EE M +E+IYD +P +P G ++S + + A L+ +P A YP + P V + D A LL L TK L G P +Y++ M A D L P L A G AA + E V G ++ R G P+ S + RD E+ ++K +++ R LPA K K +SL +QV+L+SG TGCGKTTQ+PQFLL+ + P +L TQPRR+AA+GVA RVA ERCE +G VGY+IR ++K +TRLLFCTTG+LLRR DP L E++H++VDEVHER++D D LL++L +L +RP L++ILMSAT++T+ F YFG + PVL IPG T+PV Y++ TG K+ D+D ++Y+L+ +LV + V E D G+VLVFMPG EI R L+ L LPLHG+LP Q VF+ P+GK KV+VSTN+AETSITI D VV+D+ + KEM YD + LQE W SQ + QRKGRAGRVR G+ ++L F ++PA TPEI RV L+ L LQI+AL + + LA+A++PP A+ A++ L ++ A
Sbjct: 260 VAKLQAMGFARKHVEAVFAGCRYLADD------EAVLDWLCLNVPEQELPKGFNPLGKQLEAVAYGIAASKDEEAAAGF-------------------DAVAHRGLFMELAAYGFAHADCLAALKVVHAQSASYGPE----------------LLAAAMRAELQRELRCAFAVDDSDAAVAAEDVAALREEEQMVIESIYDDKARRSP-LPLGGEVVSIQVRDDALT-----LEFHLPPASL---YPFDVPHVFVRANDDGAALNLLALTGELLDAATK-LRGEPMMYELCMAAESSDALQQAAPVQLFASAPGTAAPKAERGYEAQSQPQKVAT----------------------PGKPAKARAARRSGPRPI-----SDAHQEAVARDL------------------------------FEKHVAKQKTP---KYKLMMTARGMLPAFKEKDAIVSLLETNQVILISGATGCGKTTQVPQFLLDHFIPAQRP------CNILCTQPRRLAAIGVATRVAQERCETIGESVGYQIRMDTKKSAETRLLFCTTGVLLRRFLSDPLLNEVSHIIVDEVHERNVDTDLLLSILRDVLRQRPDLRLILMSATMNTSLFQDYFGAVTT---ATVPVLSIPGFTYPVTVHYVKHVYEVTGLTKPAKKD---------------------------------------------------------------------------DDDRVNYDLVTALVRHLVL--------------ETPDNAGAGEGAVLVFMPGVPEIKNTIRSLQTDAALEAALLPLPLHGALPAHEQARVFEAAPKGKTKVIVSTNVAETSITINDIVVVIDAGKAKEMAYDAINRRSSLQEGWISQAAADQRKGRAGRVRPGICYRLFSTAKFQKMPAQPTPEIHRVSLEPLCLQIQALQLGSSVASFLAQAIEPPSAAAITSAIEGLVEMGAF 1024
BLAST of mRNA_Ecto-sp9_F_contig10251.268.1 vs.
Match: ATP-dependent (RNA helicase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZPF8_9STRA) HSP 1 Score: 360 bits (923), Expect = 3.030e-102 Identity = 293/994 (29.48%), Postives = 443/994 (44.57%), Query Frame = 1
Query: 94 DGGAEHHGLTLDGLEGTDRAALEKVQGMGFPADDVLRAVDACPGAEGETLGQRADALLEWLCLHLEEAELPKGFDPRGRNLDVIRPGQNFGTSSNSVSGXXXXXXXXXXXXXXXXXXXXEIAAADSVEGKLLRYGFGHAEVAAAIAGASTEEEEN----GNESLDARLLRPLKILAGGLVPASARKQXXXXXXXAAGLDAELMTEEEGREAVDEEVMSLEAIYDGAVAVAPNMPEGAYLLSFDLTNLASLPTKAWLDVWIPQAGGLGGYPSEAPPVALVRGPDLLAAGLLHAAQVALARRTKSLIGNPAVYDILMWALD---ELPAMLALPATGRAARRKEAAXXXXXXXXXVGYGXXXXXXXXXXXXXXDCAKGGGEGGVDRSVRPRLPGTEPLWSGGASSLGGGSEGRDRGXXXXXXXXXXXXXXXXXXXXXXXXXXLPPGERKRGREKVEASREFESRRRQRAALPAAKAKAEFLSLARRSQVVLVSGETGCGKTTQIPQFLLEEWEEGGAPGGGPNDLRVLVTQPRRIAAVGVAQRVADERCERLGAGVGYKIRGESKAGPDTRLLFCTTGLLLRRMQGDPRLEELTHLVVDEVHERHLDADFLLALLIGILPKRPKLKVILMSATLDTARFAAYFGGLPGLPGGKTPVLHIPGRTFPVRDLYLEDAIAATGHRPRLKRKQASATPGTTXXXXXXXXXXXXXXXXXXXXXXXAGRPGGLEGPSHWLQEFEEDDEEELAQQERERGALGGLDMDRVDEDHLDYELLVSLVLYAVSPQGERELGLRGGEEEEVDGDRGVSGSVLVFMPGTMEIDRLCRELEHATEGGQGLCVLPLHGSLPPQRQRAVFDPPPRGKRKVVVSTNIAETSITIPDATVVVDSCRVKEMGYDVARQMPRLQESWASQDSLTQRKGRAGRVREGVSFKLLRRKTFARLPAHGTPEIKRVPLDHLVLQIKALGVEEHPSVVLARALDPPDPKAVQDAVDVLTDLKAL 3054
D E T++ + L K++ MGF + A+ C +T+ +L+WLCL++ E++LPKGF+P G+ L+ + G + SG + + V L YGF HA+ A+ +++ +N G RL+ +++L + Q + +M + +EE+M +E+IYD A GA++ T ++ + K ++ +P YP EAP + L + D + A A K L G P +Y+++M AL+ E+P + P + A+ K ++ V+ S + + T R++G + K + A+RE LPA K K + L +QV+L+SG TGCGKTTQ+PQFLL+ + + +L TQPRR+AA+GVA RVA ERCE +G +GY+IR ++K +TRLLFCTTG+LLRR DP L +++H++VDEVHER++D D LL++L +L +RP L++ILMSAT++T+ F YFG L K PVL IPG T+PV Y++ T K+K + +++ ++Y+L+ +LV + V + GG E G++L+FMPG EI R L+ + + L LPLHG+LPP Q VFD PP K KV+VSTN+AETSITI D VV+D+ + KEM YD + L+E W SQ + QRKGRAGRVR G ++L F ++PA TPEI RV L+ L LQI+ALG+ + + LA A++PP +A+ A++ L + A
Sbjct: 243 DDAVEQDSPTIEHVSERREEVLFKLRSMGFAEKYIESALTKCRDLSDDTI------VLDWLCLNVPESDLPKGFNPLGKQLEAVAYGISSTKEQEEQSGY-------------------DASVHSDVFSTLSAYGFSHADCLNALKVLLSQDNKNIGNNGQVGTFNRLVDQIELLHRMQIELYQELQR------TLSIVPTIMDAVDTAALREEEIMVIESIYDDK-ATQSESTFGAHI-----TTISVMEDKMQIEFHVPAESS---YPFEAPMIFLRKQDDASSENYNLLALTAHLMG-KYLQGEPMIYELIM-ALEAACEMPESIQ-PISLYASPAKTSSAP-----------------------------------VEESNKSSIVQTPKKM-------------RNKGPRPNNPMQDAQIAAMNETLAVKHQAKQKTAKYKL----MMAAREK---------LPAYKEKESIIELLESNQVILISGATGCGKTTQVPQFLLDHFIPAKI------NCNILCTQPRRLAAIGVATRVAQERCENIGESIGYQIRMDTKRSSETRLLFCTTGVLLRRFLSDPLLNDVSHIIVDEVHERNVDTDLLLSILRDVLQQRPSLRLILMSATMNTSLFQGYFGALGSK---KIPVLSIPGFTYPVTCHYIKHVYECTNFVKLTKKKSSDG-----------------------------------------------------------------------EDNQINYDLVTALVHHLVLDTPDN-----GGAGE---------GAILIFMPGVQEIKNTIRSLQSDADLSKTLLPLPLHGALPPTEQSRVFDSPPNSKTKVIVSTNVAETSITINDIVVVIDAGKAKEMAYDAINRRSSLKECWISQAAADQRKGRAGRVRPGTCYRLYGVSKFEKMPAQPTPEIHRVSLEPLCLQIQALGLGKSVASFLAEAIEPPSSEAISAAIEDLVSMGAF 1038 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10251.268.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10251.268.1 >prot_Ecto-sp9_F_contig10251.268.1 ID=prot_Ecto-sp9_F_contig10251.268.1|Name=mRNA_Ecto-sp9_F_contig10251.268.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=1015bp MMSARLRKILEEALGLTEERERQRDGGAEHHGLTLDGLEGTDRAALEKVQback to top mRNA from alignment at Ecto-sp9_F_contig10251:152..4457+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10251.268.1 ID=mRNA_Ecto-sp9_F_contig10251.268.1|Name=mRNA_Ecto-sp9_F_contig10251.268.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4306bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10251:152..4457+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10251:152..4457+ >mRNA_Ecto-sp9_F_contig10251.268.1 ID=mRNA_Ecto-sp9_F_contig10251.268.1|Name=mRNA_Ecto-sp9_F_contig10251.268.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=6090bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10251:152..4457+ (Ectocarpus species9 EcSCA_722f female)back to top |