prot_Ecto-sp9_F_contig10228.251.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10228.251.1
Unique Nameprot_Ecto-sp9_F_contig10228.251.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length178
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10228.251.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 15..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..177
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..14
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..33
score: 0.889

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10228contigEcto-sp9_F_contig10228:3353..3886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10228.251.1mRNA_Ecto-sp9_F_contig10228.251.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10228 3346..4119 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10228.251.1 ID=prot_Ecto-sp9_F_contig10228.251.1|Name=mRNA_Ecto-sp9_F_contig10228.251.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=178bp
MLSPLPFHGRLLPPLLLLLLLLLLLLRLPPVELTEARGGRSARVGVATAD
TDAVGGGGGGGGGGEGGPLIGTMAWMWMLMLLDVGAGLDVDTSCRNADAF
SGYANASRRPRGGESREERRAPLPPPCCPPSARRPRVSHESSPGSVASSP
SAPAAPPPPPPLAGAGVSSSIADRRAR*
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