prot_Ecto-sp9_F_contig10171.205.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10171.205.1
Unique Nameprot_Ecto-sp9_F_contig10171.205.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length224
Homology
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BLAST of mRNA_Ecto-sp9_F_contig10171.205.1 vs.
Match: WD-40 (repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB83_ECTSI)

HSP 1 Score: 400 bits (1029), Expect = 2.280e-125
Identity = 210/213 (98.59%), Postives = 212/213 (99.53%), Query Frame = 0 
Query:    1 PGYFSEFLSARICRHPIFTDMRFWQHVLSEAVQAKTEKIAKDRHSIASARRAGAGGHAKDEGGGGSLLSSPGSPDEAVAASNLLGKNPGLKKLDAEANLAVEFKDPALASEIVCRQVKVFLYEMASIGMRARTAQRYVEAVSLQYKLQPSARNRLSETVQLVWGAVASMAGPGSPPFGSELTPEMSVAQAGWSQAKIDADADADLAAVHSEQP 213
            PGYFSEFLSARICRHPIFTDMRFWQHVLSEAVQAKTEKIAKDRHSIASARRAGAGGHAKDEGGGGSLLSSPGSPDEAVAASNLLGKNPGLKKLDAEANLAVEFKDPALASEIVCRQVKVFLYEMASIGMRA+TAQRYVEAVSLQYKLQPSARNRLSETV+LVWGAVASMAGPGSPPFGSELTPEMSVAQAGWSQAKIDADADADLAAVHS QP
Sbjct: 1838 PGYFSEFLSARICRHPIFTDMRFWQHVLSEAVQAKTEKIAKDRHSIASARRAGAGGHAKDEGGGGSLLSSPGSPDEAVAASNLLGKNPGLKKLDAEANLAVEFKDPALASEIVCRQVKVFLYEMASIGMRAKTAQRYVEAVSLQYKLQPSARNRLSETVRLVWGAVASMAGPGSPPFGSELTPEMSVAQAGWSQAKIDADADADLAAVHSGQP 2050
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BLAST of mRNA_Ecto-sp9_F_contig10171.205.1 vs.
Match: UDENN (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB05_9PHAE)

HSP 1 Score: 398 bits (1022), Expect = 1.990e-124
Identity = 209/213 (98.12%), Postives = 210/213 (98.59%), Query Frame = 0 
Query:    1 PGYFSEFLSARICRHPIFTDMRFWQHVLSEAVQAKTEKIAKDRHSIASARRAGAGGHAKDEGGGGSLLSSPGSPDEAVAASNLLGKNPGLKKLDAEANLAVEFKDPALASEIVCRQVKVFLYEMASIGMRARTAQRYVEAVSLQYKLQPSARNRLSETVQLVWGAVASMAGPGSPPFGSELTPEMSVAQAGWSQAKIDADADADLAAVHSEQP 213
            PGYFSEFLSARICRHPIFTDMRFWQHVLSEAVQAKTEKIAKDRHSIASARRAGAGGHAKDEGGGGSLLSSPGSPDEAVAASNLLGKNPG KKLDAEANLAVEFKDPALASEIVCRQVKVFLYEMASIGMRARTAQRYVEAVSLQYKLQPSARNRLSETV+LVWGAVASMAGPGSPPFGSELTPEMSVAQAGWSQAKIDADADADLAA HS QP
Sbjct: 1892 PGYFSEFLSARICRHPIFTDMRFWQHVLSEAVQAKTEKIAKDRHSIASARRAGAGGHAKDEGGGGSLLSSPGSPDEAVAASNLLGKNPGRKKLDAEANLAVEFKDPALASEIVCRQVKVFLYEMASIGMRARTAQRYVEAVSLQYKLQPSARNRLSETVRLVWGAVASMAGPGSPPFGSELTPEMSVAQAGWSQAKIDADADADLAATHSGQP 2104
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10171.205.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
WD-402.280e-12598.59repeat protein n=1 Tax=Ectocarpus siliculosus TaxI... [more]
UDENN1.990e-12498.12domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10171contigEcto-sp9_F_contig10171:352..4536 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10171.205.1mRNA_Ecto-sp9_F_contig10171.205.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10171 351..4536 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10171.205.1 ID=prot_Ecto-sp9_F_contig10171.205.1|Name=mRNA_Ecto-sp9_F_contig10171.205.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=224bp
PGYFSEFLSARICRHPIFTDMRFWQHVLSEAVQAKTEKIAKDRHSIASAR
RAGAGGHAKDEGGGGSLLSSPGSPDEAVAASNLLGKNPGLKKLDAEANLA
VEFKDPALASEIVCRQVKVFLYEMASIGMRARTAQRYVEAVSLQYKLQPS
ARNRLSETVQLVWGAVASMAGPGSPPFGSELTPEMSVAQAGWSQAKIDAD
ADADLAAVHSEQPPPPAAAAATSG
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