prot_Ecto-sp9_F_contig1017.202.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1017.202.1
Unique Nameprot_Ecto-sp9_F_contig1017.202.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length110
Homology
BLAST of mRNA_Ecto-sp9_F_contig1017.202.1 vs.
Match: ABC (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHF0_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 3.850e-65
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
Query:    1 MSSGQRQLLCIARALLRRSKIVCVDEATARMDVRTAKLVDAAMAEAFRDATVLTVAHRLPPVLESCDKVAVMSEGRVVEQGRPRDLAADTTSRFSALLRAQDGGGNVAA 109
            MSSGQRQLLCIARALLRRSKIVCVDEATARMDVRTAKLVDAAMAEAFRDATVLTVAHRLPPVLESCDKVAVMSEGRVVEQGRPRDLAADTTSRFSALLRAQDGGGNVAA
Sbjct:  159 MSSGQRQLLCIARALLRRSKIVCVDEATARMDVRTAKLVDAAMAEAFRDATVLTVAHRLPPVLESCDKVAVMSEGRVVEQGRPRDLAADTTSRFSALLRAQDGGGNVAA 267          
BLAST of mRNA_Ecto-sp9_F_contig1017.202.1 vs.
Match: ABC (multidrug transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSP7_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 5.540e-54
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0
Query:    1 MSSGQRQLLCIARALLRRSKIVCVDEATARMDVRTAKLVDAAMAEAFRDATVLTVAHRLPPVLESCDKVAVMSEGRVVEQGRPRDLAADTTSRF 94
            MSSGQRQLLCIARALLRRSKIVCVDEATARMDVRTAKLVDAAMAEAFRDATVLTVAHRLPPVLESCDKVAVMSEGRVVEQG+PRDLAADTTSRF
Sbjct:  168 MSSGQRQLLCIARALLRRSKIVCVDEATARMDVRTAKLVDAAMAEAFRDATVLTVAHRLPPVLESCDKVAVMSEGRVVEQGKPRDLAADTTSRF 261          
BLAST of mRNA_Ecto-sp9_F_contig1017.202.1 vs.
Match: ATP-binding (cassette sub-family C member 5-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D9688)

HSP 1 Score: 104 bits (259), Expect = 9.580e-27
Identity = 55/101 (54.46%), Postives = 72/101 (71.29%), Query Frame = 0
Query:    2 SSGQRQLLCIARALLRRSKIVCVDEATARMDVRTAKLVDAAMAEAFRDATVLTVAHRLPPVLESCDKVAVMSEGRVVEQGRPRDLAADTTSRFSALLRAQD 102
            S G+RQLLC+ARALLR SKI+ +DEATA +D  T  LV   + EAF + T+L +A+RL  VL  CD++ VM EG+VVE GRP+DL A   S+F A+L A +
Sbjct:   10 SVGERQLLCMARALLRNSKILMLDEATAAIDTETDSLVQKTIKEAFAECTMLIIANRLNTVL-GCDRILVMEEGKVVEYGRPKDLMASDKSKFKAMLEAAE 109          
BLAST of mRNA_Ecto-sp9_F_contig1017.202.1 vs.
Match: ATP-binding (cassette sub-family C member 5-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC769)

HSP 1 Score: 103 bits (257), Expect = 1.870e-26
Identity = 54/99 (54.55%), Postives = 69/99 (69.70%), Query Frame = 0
Query:    2 SSGQRQLLCIARALLRRSKIVCVDEATARMDVRTAKLVDAAMAEAFRDATVLTVAHRLPPVLESCDKVAVMSEGRVVEQGRPRDLAADTTSRFSALLRA 100
            S G+RQLLCIAR+LLR SKI+ +DEA A +D  T  LV   + E F + T+L +AHRL  VL  CD++ VM EG+VVE GRP+DL A   S+F A+L A
Sbjct:   10 SVGERQLLCIARSLLRNSKILMLDEAAAAIDTETDSLVQRTIEETFAECTMLIIAHRLNTVL-GCDRILVMEEGKVVEYGRPKDLMASNKSKFKAMLEA 107          
BLAST of mRNA_Ecto-sp9_F_contig1017.202.1 vs.
Match: ATP (binding cassette subfamily C member 12 n=1 Tax=Dromaius novaehollandiae TaxID=8790 RepID=A0A8C4KM57_DRONO)

HSP 1 Score: 105 bits (263), Expect = 8.270e-26
Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 0
Query:    2 SSGQRQLLCIARALLRRSKIVCVDEATARMDVRTAKLVDAAMAEAFRDATVLTVAHRLPPVLESCDKVAVMSEGRVVEQGRPRDLAADTTSRFSALLRA 100
            S G+RQLLC+ARALLR S+I+ +DEATA +D +T  L+   + EAF+D TVLT+AHR+  V+E CD + VMS G+V E G+P+DL  +  S F++LL A
Sbjct:  152 SVGERQLLCMARALLRNSRIILLDEATASIDSKTDALIQCTIREAFKDCTVLTIAHRIDTVME-CDNILVMSNGKVAEFGKPKDLVKNPNSAFASLLAA 249          
BLAST of mRNA_Ecto-sp9_F_contig1017.202.1 vs.
Match: ATP-binding (cassette sub-family C member 5-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DC67D)

HSP 1 Score: 103 bits (257), Expect = 9.970e-26
Identity = 54/99 (54.55%), Postives = 70/99 (70.71%), Query Frame = 0
Query:    2 SSGQRQLLCIARALLRRSKIVCVDEATARMDVRTAKLVDAAMAEAFRDATVLTVAHRLPPVLESCDKVAVMSEGRVVEQGRPRDLAADTTSRFSALLRA 100
            S G+RQLLC+ARALLR SKI+ +DEATA ++  T  LV   + EAF + T+L +AHRL  VL  CD++  M EG+VVE GRP+DL A   S+F A+L A
Sbjct:   70 SVGERQLLCMARALLRNSKILMLDEATAAIETETDALVQKTIKEAFAECTMLIIAHRLNTVL-GCDRILAMEEGKVVEYGRPKDLMASNKSKFKAMLEA 167          
BLAST of mRNA_Ecto-sp9_F_contig1017.202.1 vs.
Match: Multidrug (resistance-associated protein 9 n=1 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4X3X6_AMPAM)

HSP 1 Score: 102 bits (253), Expect = 1.490e-25
Identity = 54/102 (52.94%), Postives = 71/102 (69.61%), Query Frame = 0
Query:    1 MSSGQRQLLCIARALLRRSKIVCVDEATARMDVRTAKLVDAAMAEAFRDATVLTVAHRLPPVLESCDKVAVMSEGRVVEQGRPRDLAADTTSRFSALLRAQD 102
            +S GQRQLLC+ARALLR+S++VC+DEATA +D  T +LV A + ++ R  TV+++ HRL  V   CD+V VM+ G  VE G P  L AD  S FSAL R Q+
Sbjct:   30 LSLGQRQLLCVARALLRQSQVVCLDEATANLDPETDRLVQATVQDSLRHKTVISIGHRLSAV-RWCDRVLVMAGGEAVELGPPDQLLADPGSAFSALFRQQE 130          
BLAST of mRNA_Ecto-sp9_F_contig1017.202.1 vs.
Match: ABC (transporter domain-containing protein (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6G4ZUV1_RHIMP)

HSP 1 Score: 102 bits (253), Expect = 1.900e-25
Identity = 53/99 (53.54%), Postives = 71/99 (71.72%), Query Frame = 0
Query:    2 SSGQRQLLCIARALLRRSKIVCVDEATARMDVRTAKLVDAAMAEAFRDATVLTVAHRLPPVLESCDKVAVMSEGRVVEQGRPRDLAADTTSRFSALLRA 100
            S G+RQLLC+ARA+LR +KI+ +DEATA +D  T +L+   + E F D TVLT+AHRL  VL+ CD V V+  G+V+E G P  L+ DT S FSA+L+A
Sbjct:   38 SVGERQLLCLARAMLRHNKILVLDEATASVDAETDRLIQQTVREVFADCTVLTIAHRLHSVLD-CDMVIVLDGGQVIEMGSPVTLSKDTNSVFSAMLKA 135          
BLAST of mRNA_Ecto-sp9_F_contig1017.202.1 vs.
Match: ABC (transporter domain-containing protein n=1 Tax=Gopherus agassizii TaxID=38772 RepID=A0A452H4Z9_9SAUR)

HSP 1 Score: 106 bits (264), Expect = 2.520e-25
Identity = 55/99 (55.56%), Postives = 71/99 (71.72%), Query Frame = 0
Query:    2 SSGQRQLLCIARALLRRSKIVCVDEATARMDVRTAKLVDAAMAEAFRDATVLTVAHRLPPVLESCDKVAVMSEGRVVEQGRPRDLAADTTSRFSALLRA 100
            S G+RQLLC+ARALLR SKI+ +DEATA +D  T  L+ + + EAF+D TVLT+AHR+  VLE CD + VM  G+V+E G+P DL   T S F +LL A
Sbjct:  232 SVGERQLLCMARALLRNSKIILLDEATASIDSETDALIQSTIREAFKDCTVLTIAHRINTVLE-CDHILVMDNGKVIEFGKPEDLVQKTDSAFGSLLAA 329          
BLAST of mRNA_Ecto-sp9_F_contig1017.202.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2CSD6_9DINO)

HSP 1 Score: 100 bits (250), Expect = 2.790e-25
Identity = 53/99 (53.54%), Postives = 73/99 (73.74%), Query Frame = 0
Query:    2 SSGQRQLLCIARALLRRSKIVCVDEATARMDVRTAKLVDAAMAEAFRDATVLTVAHRLPPVLESCDKVAVMSEGRVVEQGRPRDLAADTTSRFSALLRA 100
            S GQRQLLC+ARA+LRRS++V +DEATA +D +T +L+   +   FR++TV+T+AHRL  +L+S DK+ V+  G+V E G P  LA D TSRF  LLR+
Sbjct:   17 SVGQRQLLCLARAVLRRSRLVLLDEATASVDPQTDELIQRTIRAEFRESTVMTIAHRLNTILDS-DKILVLESGKVGEFGTPTGLARDETSRFHKLLRS 114          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1017.202.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
ABC3.850e-65100.00protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
ABC5.540e-5498.94multidrug transporter n=1 Tax=Ectocarpus siliculos... [more]
ATP-binding9.580e-2754.46cassette sub-family C member 5-like n=1 Tax=Mercen... [more]
ATP-binding1.870e-2654.55cassette sub-family C member 5-like n=1 Tax=Mercen... [more]
ATP8.270e-2653.54binding cassette subfamily C member 12 n=1 Tax=Dro... [more]
ATP-binding9.970e-2654.55cassette sub-family C member 5-like n=1 Tax=Mercen... [more]
Multidrug1.490e-2552.94resistance-associated protein 9 n=1 Tax=Amphibalan... [more]
ABC1.900e-2553.54transporter domain-containing protein (Fragment) n... [more]
ABC2.520e-2555.56transporter domain-containing protein n=1 Tax=Goph... [more]
Hypothetical2.790e-2553.54protein (Fragment) n=1 Tax=Alexandrium andersonii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 1..29
e-value: 1.1E-6
score: 29.2
NoneNo IPR availableGENE3D3.40.50.300coord: 1..106
e-value: 2.8E-29
score: 104.3
NoneNo IPR availablePANTHERPTHR24223FAMILY NOT NAMEDcoord: 1..98
NoneNo IPR availablePANTHERPTHR24223:SF262coord: 1..98
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1017contigEcto-sp9_F_contig1017:378..2711 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1017.202.1mRNA_Ecto-sp9_F_contig1017.202.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1017 99..3086 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1017.202.1 ID=prot_Ecto-sp9_F_contig1017.202.1|Name=mRNA_Ecto-sp9_F_contig1017.202.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=110bp
MSSGQRQLLCIARALLRRSKIVCVDEATARMDVRTAKLVDAAMAEAFRDA
TVLTVAHRLPPVLESCDKVAVMSEGRVVEQGRPRDLAADTTSRFSALLRA
QDGGGNVAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase