prot_Ecto-sp9_F_contig996.18024.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig996.18024.1
Unique Name	prot_Ecto-sp9_F_contig996.18024.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	100

Homology

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BLAST of mRNA_Ecto-sp9_F_contig996.18024.1 vs.
Match: 40S (ribosomal protein S14 n=3 Tax=Sar TaxID=2698737 RepID=D7FYS4_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 6.760e-62
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0

Query:    1 MVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 99
            MVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL
Sbjct:   53 MVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 151

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BLAST of mRNA_Ecto-sp9_F_contig996.18024.1 vs.
Match: Hypothetical (protein n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VHY6_9ANNE)

HSP 1 Score: 185 bits (470), Expect = 1.030e-58
Identity = 92/99 (92.93%), Postives = 98/99 (98.99%), Query Frame = 0

Query:    1 MVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 99
            +VR+TGGMKVKADRDEASPYAAMLAAQDVA RCK+LGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTPIP+DCTRRKGGRRGRRL
Sbjct:   41 LVRITGGMKVKADRDEASPYAAMLAAQDVAERCKQLGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDCTRRKGGRRGRRL 139

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BLAST of mRNA_Ecto-sp9_F_contig996.18024.1 vs.
Match: Uncharacterized (protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5CAB9_AQUCA)

HSP 1 Score: 184 bits (467), Expect = 2.780e-58
Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 0

Query:    1 MVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 99
            MVR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:   39 MVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 137

[Close]

BLAST of mRNA_Ecto-sp9_F_contig996.18024.1 vs.
Match: 40s (ribosomal S14-like protein n=1 Tax=Phragmatopoma lapidosa TaxID=341668 RepID=E9LR64_9ANNE)

HSP 1 Score: 184 bits (468), Expect = 3.070e-58
Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 0

Query:    1 MVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 99
            +VRVTGGMKVKADRDEASPYAAMLAAQDVA RCKELGITALHIK+RATGGN+TKTPGPGAQSALRALARAGMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:   53 IVRVTGGMKVKADRDEASPYAAMLAAQDVAVRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 151

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BLAST of mRNA_Ecto-sp9_F_contig996.18024.1 vs.
Match: Uncharacterized (protein n=2 Tax=Coptis chinensis TaxID=261450 RepID=A0A835H9E5_9MAGN)

HSP 1 Score: 184 bits (468), Expect = 3.070e-58
Identity = 93/99 (93.94%), Postives = 97/99 (97.98%), Query Frame = 0

Query:    1 MVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 99
            MVR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:   53 MVRITGGMKVKADRDESSPYAAMLAAQDVATRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 151

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BLAST of mRNA_Ecto-sp9_F_contig996.18024.1 vs.
Match: 40S (ribosomal protein S14 n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6P3S2_MAIZE)

HSP 1 Score: 182 bits (463), Expect = 4.340e-58
Identity = 91/99 (91.92%), Postives = 97/99 (97.98%), Query Frame = 0

Query:    1 MVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 99
            +VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTP+PTD TRRKGGRRGRRL
Sbjct:    9 LVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 107

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BLAST of mRNA_Ecto-sp9_F_contig996.18024.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1FHR1_ASPOF)

HSP 1 Score: 182 bits (463), Expect = 4.620e-58
Identity = 91/99 (91.92%), Postives = 97/99 (97.98%), Query Frame = 0

Query:    1 MVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 99
            +VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMK+GRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:   11 LVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKVGRIEDVTPIPTDSTRRKGGRRGRRL 109

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BLAST of mRNA_Ecto-sp9_F_contig996.18024.1 vs.
Match: Uncharacterized (protein n=3 Tax=Panicoideae TaxID=147369 RepID=A0A804R4M6_MAIZE)

HSP 1 Score: 182 bits (463), Expect = 4.930e-58
Identity = 91/99 (91.92%), Postives = 97/99 (97.98%), Query Frame = 0

Query:    1 MVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 99
            +VR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTP+PTD TRRKGGRRGRRL
Sbjct:   13 LVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 111

[Close]

BLAST of mRNA_Ecto-sp9_F_contig996.18024.1 vs.
Match: Uncharacterized (protein n=2 Tax=Pentapetalae TaxID=1437201 RepID=A0A7J8M0W2_9ROSI)

HSP 1 Score: 183 bits (464), Expect = 5.970e-58
Identity = 92/99 (92.93%), Postives = 97/99 (97.98%), Query Frame = 0

Query:    1 MVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 99
            MVR+TGGMKVKADRDE+SPYAAMLAAQDV+ RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTPIPTD TRRKGGRRGRRL
Sbjct:   18 MVRITGGMKVKADRDESSPYAAMLAAQDVSQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDSTRRKGGRRGRRL 116

[Close]

BLAST of mRNA_Ecto-sp9_F_contig996.18024.1 vs.
Match: Uncharacterized (protein n=7 Tax=Magnoliopsida TaxID=3398 RepID=K3YAJ9_SETIT)

HSP 1 Score: 184 bits (466), Expect = 6.190e-58
Identity = 92/99 (92.93%), Postives = 97/99 (97.98%), Query Frame = 0

Query:    1 MVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGGNKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL 99
            MVR+TGGMKVKADRDE+SPYAAMLAAQDVA RCKELGITALHIK+RATGGNKTKTPGPGAQSALRALAR+GMKIGRIEDVTP+PTD TRRKGGRRGRRL
Sbjct:   53 MVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL 151

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig996.18024.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig996.18024.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
40S	6.760e-62	100.00	ribosomal protein S14 n=3 Tax=Sar TaxID=2698737 Re...	[more]
Hypothetical	1.030e-58	92.93	protein n=1 Tax=Dimorphilus gyrociliatus TaxID=266...	[more]
Uncharacterized	2.780e-58	93.94	protein n=2 Tax=Thalictroideae TaxID=1463137 RepID...	[more]
40s	3.070e-58	94.95	ribosomal S14-like protein n=1 Tax=Phragmatopoma l...	[more]
Uncharacterized	3.070e-58	93.94	protein n=2 Tax=Coptis chinensis TaxID=261450 RepI...	[more]
40S	4.340e-58	91.92	ribosomal protein S14 n=1 Tax=Zea mays TaxID=4577 ...	[more]
Uncharacterized	4.620e-58	91.92	protein (Fragment) n=1 Tax=Asparagus officinalis T...	[more]
Uncharacterized	4.930e-58	91.92	protein n=3 Tax=Panicoideae TaxID=147369 RepID=A0A...	[more]
Uncharacterized	5.970e-58	92.93	protein n=2 Tax=Pentapetalae TaxID=1437201 RepID=A...	[more]
Uncharacterized	6.190e-58	92.93	protein n=7 Tax=Magnoliopsida TaxID=3398 RepID=K3Y...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001971	Ribosomal protein S11	PIRSF	PIRSF002131	RPS11p_RPS11a_RPS14e_RPS11o	coord: 1..96 e-value: 1.8E-23 score: 80.9
IPR001971	Ribosomal protein S11	PFAM	PF00411	Ribosomal_S11	coord: 2..95 e-value: 3.0E-33 score: 114.5
IPR001971	Ribosomal protein S11	PANTHER	PTHR11759	40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11	coord: 1..99
IPR036967	Ribosomal protein S11 superfamily	GENE3D	3.30.420.80		coord: 1..99 e-value: 3.8E-57 score: 194.1
None	No IPR available	PANTHER	PTHR11759:SF28		coord: 1..99
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 3..95
IPR018102	Ribosomal S11, conserved site	PROSITE	PS00054	RIBOSOMAL_S11	coord: 64..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig996	contig	Ecto-sp9_F_contig996:11327..13083 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig996.18024.1	mRNA_Ecto-sp9_F_contig996.18024.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig996 10450..13402 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig996.18024.1 ID=prot_Ecto-sp9_F_contig996.18024.1|Name=mRNA_Ecto-sp9_F_contig996.18024.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=100bp
MVRVTGGMKVKADRDEASPYAAMLAAQDVAARCKELGITALHIKMRATGG
NKTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDCTRRKGGRRGRRL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001971	Ribosomal_S11
IPR036967	Ribosomal_S11_sf
IPR018102	Ribosomal_S11_CS