prot_Ecto-sp9_F_contig1014.179.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1014.179.1
Unique Nameprot_Ecto-sp9_F_contig1014.179.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length79
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1014.179.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP0_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 1.560e-49
Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 0 
Query:    1 MVVIVETGDGGWDTQEEPRDMLVGRVFGGLPNGRLGRHSVKAARSPVDPGTEPSTPCSSFPDLGNTSTWETPRISQREG 79
            MVVIVETGDGGWDTQEEPRDMLVGRVFGGLPNGRLGRHSVKAARSPVDPGTEPSTPCSSFPDLGNT+ WETPR+ QREG
Sbjct:    1 MVVIVETGDGGWDTQEEPRDMLVGRVFGGLPNGRLGRHSVKAARSPVDPGTEPSTPCSSFPDLGNTNKWETPRVPQREG 79
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1014.179.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH43_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 4.660e-24
Identity = 48/52 (92.31%), Postives = 50/52 (96.15%), Query Frame = 0 
Query:   22 LVGRVFGGLPNGRLGRHSVKAARSPVDPGTEPSTPCSSFPDLGNTSTWETPR 73
            LVGRVFGGLPNGRLGRHSVKAARSPVDPGTEP+TPCSSF DLGN +TWETPR
Sbjct:   12 LVGRVFGGLPNGRLGRHSVKAARSPVDPGTEPATPCSSFQDLGNMNTWETPR 63
[Close]
BLAST of mRNA_Ecto-sp9_F_contig1014.179.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3B3_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 2.460e-15
Identity = 44/77 (57.14%), Postives = 54/77 (70.13%), Query Frame = 0 
Query:    1 MVVIVETGDGGWDTQE--EPRDMLVGRVFGGLPNGRLGRHSVKAARSP------VDPGTEPSTPCSSFPDLGNTSTW 69
            MV++ ++GD  WDT+   +PRDML GRVFGGLPNGRLGR S+KA  S       VDP TEPSTP SS  DL + +T+
Sbjct:    1 MVIVEDSGD--WDTERKTDPRDMLFGRVFGGLPNGRLGRRSIKAGGSAGNSVLRVDPVTEPSTPSSSSADLTSFNTF 75
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1014.179.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized1.560e-4994.94protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.660e-2492.31protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.460e-1557.14protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1014contigEcto-sp9_F_contig1014:25388..27035 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1014.179.1mRNA_Ecto-sp9_F_contig1014.179.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1014 25388..27035 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1014.179.1 ID=prot_Ecto-sp9_F_contig1014.179.1|Name=mRNA_Ecto-sp9_F_contig1014.179.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=79bp
MVVIVETGDGGWDTQEEPRDMLVGRVFGGLPNGRLGRHSVKAARSPVDPG
TEPSTPCSSFPDLGNTSTWETPRISQREG
back to top