prot_Ecto-sp9_F_contig9866.17943.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9866.17943.1
Unique Nameprot_Ecto-sp9_F_contig9866.17943.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length66
Homology
BLAST of mRNA_Ecto-sp9_F_contig9866.17943.1 vs.
Match: PX (domain containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ7_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 2.640e-34
Identity = 62/65 (95.38%), Postives = 65/65 (100.00%), Query Frame = 0
Query:    2 VHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDMSFVEERRKALDQYLKTLLQV 66
            VHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGD+SFVEERRKAL+QYLKTLLQ+
Sbjct:   84 VHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQL 148          
BLAST of mRNA_Ecto-sp9_F_contig9866.17943.1 vs.
Match: PX (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS20_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 2.950e-32
Identity = 61/65 (93.85%), Postives = 65/65 (100.00%), Query Frame = 0
Query:    2 VHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDMSFVEERRKALDQYLKTLLQV 66
            VHRRFRDF+ALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGD+SFVEERRKAL+QYLKTLLQ+
Sbjct:  157 VHRRFRDFHALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDLSFVEERRKALEQYLKTLLQL 221          
BLAST of mRNA_Ecto-sp9_F_contig9866.17943.1 vs.
Match: PX (domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLT8_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.700e-13
Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 0
Query:    2 VHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDMSFVEERRKALDQYLKTLLQV 66
            VHRR+R+F  L EQV +  KGHHLRSSLP  PG++ KL  +H D +FVEERR  L+  L  LL V
Sbjct:  149 VHRRYREFVCLFEQVHAAFKGHHLRSSLPELPGRQLKLLVDHNDTAFVEERRLLLETALGKLLSV 213          
BLAST of mRNA_Ecto-sp9_F_contig9866.17943.1 vs.
Match: Hypothetical (protein n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A6T9YST3_BIGNA)

HSP 1 Score: 56.6 bits (135), Expect = 7.080e-8
Identity = 30/63 (47.62%), Postives = 38/63 (60.32%), Query Frame = 0
Query:    4 RRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDMSFVEERRKALDQYLKTLLQV 66
            +RF DF  L   V S   GH L S+LP  P K  KLWT+H + SFV++RR  L++YL  L  V
Sbjct:  151 KRFSDFEKLDHLVRSSFSGHQLMSNLPPKPSKSVKLWTDHLEKSFVQQRRGELNRYLTKLFNV 213          
BLAST of mRNA_Ecto-sp9_F_contig9866.17943.1 vs.
Match: Hypothetical (protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CUY1_9EUKA)

HSP 1 Score: 48.1 bits (113), Expect = 3.380e-5
Identity = 23/63 (36.51%), Postives = 39/63 (61.90%), Query Frame = 0
Query:    4 RRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDMSFVEERRKALDQYLKTLLQV 66
            +RF  FY    ++    K    +  LP+FP + SK++T+H D  F+E+RRK LD+++K L ++
Sbjct:   67 KRFNAFYGFYRKLSKDFK----KCGLPKFPPRHSKVFTDHNDPVFIEQRRKKLDKFMKELFKI 125          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9866.17943.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
PX2.640e-3495.38domain containing protein (Partial) (Fragment) n=1... [more]
PX2.950e-3293.85domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
PX3.700e-1356.92domain-containing protein n=3 Tax=Monodopsidaceae ... [more]
Hypothetical7.080e-847.62protein n=1 Tax=Bigelowiella natans TaxID=227086 R... [more]
Hypothetical3.380e-536.51protein n=1 Tax=Amorphochlora amoebiformis TaxID=1... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 1..66
e-value: 9.5E-14
score: 53.1
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 2..65
IPR001683Phox homologous domainPFAMPF00787PXcoord: 1..65
e-value: 5.6E-11
score: 42.4
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 1..66
score: 14.731

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9866contigEcto-sp9_F_contig9866:68..847 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9866.17943.1mRNA_Ecto-sp9_F_contig9866.17943.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9866 68..847 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9866.17943.1 ID=prot_Ecto-sp9_F_contig9866.17943.1|Name=mRNA_Ecto-sp9_F_contig9866.17943.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=66bp
QVHRRFRDFYALQEQVESLMKGHHLRSSLPRFPGKKSKLWTNHGDMSFVE
ERRKALDQYLKTLLQV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf
IPR001683Phox