prot_Ecto-sp9_F_contig9852.17934.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9852.17934.1
Unique Nameprot_Ecto-sp9_F_contig9852.17934.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length216
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9852.17934.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD6_ECTSI)

HSP 1 Score: 337 bits (865), Expect = 3.070e-109
Identity = 205/215 (95.35%), Postives = 207/215 (96.28%), Query Frame = 0 
Query:    2 PQPTPLWEYRAHVRAAATADPRSVVRCGKAGVSVEGRGVGDVALCVDATSLGGEGDGPKRGSVVLLLNSGDPTPLHTWRLPGDTPTSMRLLLGSGGGPEGVLCLTQRGELLMLSVAGSPSTAAGGGEALVPRPRQQQVASGVGVLRMKHGASAPALHLSAASKRALLAVDLAASDPALASGXXXXXXXXXXXXXXXXXXXXXXXXGADDGHAGGR 216
            P+PTPLWEYRAHVRAAATADPRSVVRCGKAGVSVEGRGVGDVALCVDA SLGGEGDGPKRGSVVLLLNSGDPTPLHTWRLPGDTPTSMRLLLGSGGG EGVLCLTQRGELLMLSVAG+PSTAAG GEA VPRPRQQQVASGVGVLRMKHGASAPALHLSAASKRALLAVDLAASDPALASGXXXXXXXXXXXXXXXXXXXXXX  G D GHAGGR
Sbjct:  389 PEPTPLWEYRAHVRAAATADPRSVVRCGKAGVSVEGRGVGDVALCVDAASLGGEGDGPKRGSVVLLLNSGDPTPLHTWRLPGDTPTSMRLLLGSGGGREGVLCLTQRGELLMLSVAGAPSTAAGRGEASVPRPRQQQVASGVGVLRMKHGASAPALHLSAASKRALLAVDLAASDPALASGXXXXXXXXXXXXXXXXXXXXXXE-GPDVGHAGGR 602
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9852.17934.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD90_9PHAE)

HSP 1 Score: 323 bits (829), Expect = 5.150e-100
Identity = 201/218 (92.20%), Postives = 205/218 (94.04%), Query Frame = 0 
Query:    2 PQPTPLWEYRAHVRAAATADPRSVVRCGKAGVSVEGRGVGDVALCVDATSLGGEGDGPKRGSVVLLLNSGDPTPLHTWRLPGDTPTSMRLLLGSGGGPEGVLCLTQRGELLMLSVAGSPSTAAGGGEALVPRPRQQQVASGVGVLRMKHGASAPALHLSAASKRALLAVDLAASDPALASGXXXXXXXXXXXXXXXXXXXXXXXXG---ADDGHAGGR 216
            P+PTPLWEYRAHVRAAATADPRSVV CGKAGVSVEG GVGDVALCVDA SL GEGDGPKRGSVVLLLNSGDPTPLHTWRLPGDTPTSMRLLLGSGGG EGVLCLT+RGELLMLSVAG+PSTAAGG  A VPRPRQQQVASGVGV+RMKHGASAPALHLSAASKR LLAVDLAASDPALASGXXXXXXXXXXXXXXXXXXXXXXXX    ADDGHAGGR
Sbjct:  885 PEPTPLWEYRAHVRAAATADPRSVVGCGKAGVSVEGGGVGDVALCVDAASLRGEGDGPKRGSVVLLLNSGDPTPLHTWRLPGDTPTSMRLLLGSGGGREGVLCLTRRGELLMLSVAGAPSTAAGGWGASVPRPRQQQVASGVGVVRMKHGASAPALHLSAASKRTLLAVDLAASDPALASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXADDGHAGGR 1102
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9852.17934.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized3.070e-10995.35protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.150e-10092.20protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9852contigEcto-sp9_F_contig9852:442..2623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9852.17934.1mRNA_Ecto-sp9_F_contig9852.17934.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9852 442..2623 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9852.17934.1 ID=prot_Ecto-sp9_F_contig9852.17934.1|Name=mRNA_Ecto-sp9_F_contig9852.17934.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=216bp
MPQPTPLWEYRAHVRAAATADPRSVVRCGKAGVSVEGRGVGDVALCVDAT
SLGGEGDGPKRGSVVLLLNSGDPTPLHTWRLPGDTPTSMRLLLGSGGGPE
GVLCLTQRGELLMLSVAGSPSTAAGGGEALVPRPRQQQVASGVGVLRMKH
GASAPALHLSAASKRALLAVDLAASDPALASGGGGKRLRVSTATAGGDDD
DEEEEEGADDGHAGGR
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