prot_Ecto-sp9_F_contig9804.17895.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9804.17895.1
Unique Nameprot_Ecto-sp9_F_contig9804.17895.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length570
Homology
BLAST of mRNA_Ecto-sp9_F_contig9804.17895.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z1_9PHAE)

HSP 1 Score: 339 bits (870), Expect = 2.910e-107
Identity = 234/322 (72.67%), Postives = 243/322 (75.47%), Query Frame = 0
Query:  251 SSGYGGSDRSGSSGTDASSGDDPCLGSFTATIDGFGSRRSSLGNGFGLGGGDRRFSLDAAAADPASTCASGLPFYFEPLESGXXXXXXXXVVAVDGPXXXXAEAEQVAAVSMMAARRTSLEEALYGACYRRASFQGLQASAAVTAPSTLAHSHHQLQHHQH-HTSSSEDLPWNQLVHQADVTGQWGVRTAATAA--EGNDQPAGDSKMFSTSLYLSAGFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFSAMPFPATSMLSPYDPDRFALDGGVGPGASTTLKDLLFDNNRWSHQPPLSSLNELPMMESTT 569
            SSGY GSDRSG SGTDASSGDDPCLGS T TIDGFGS RSSLG+GFG  GGDRRF LD AAADP S   SGLPFYF PLESG XXXXXXX    D  XXXXAEAEQVAAVSMMAAR TSLEEALYGACYRRASF+GL A AAV APSTLAHSHHQ Q  Q+ H SSSE L WNQL+ QAD TGQWGV TAA AA  EG DQP GDS++ STSL+LS GFGGXXXXXXXXXXXXXXX                      SF AMP         +D DRFALDGGVG GA TTLKDLLFDNNRWSHQPP  SLNELPMMEST+
Sbjct:  197 SSGYDGSDRSGLSGTDASSGDDPCLGSSTVTIDGFGSHRSSLGDGFGFNGGDRRFGLDVAAADPTSNGGSGLPFYFAPLESGGXXXXXXXXXXXDXXXXXXAEAEQVAAVSMMAAR-TSLEEALYGACYRRASFEGL-APAAVAAPSTLAHSHHQYQPLQYQHPSSSEGLAWNQLLQQADATGQWGVHTAAAAAAAEGTDQPTGDSRVLSTSLHLSGGFGGXXXXXXXXXXXXXXXQ---------------------SFFAMP---------HDHDRFALDGGVGLGALTTLKDLLFDNNRWSHQPP-PSLNELPMMESTS 485          
BLAST of mRNA_Ecto-sp9_F_contig9804.17895.1 vs.
Match: Zinc (finger transcriptional regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM5_ECTSI)

HSP 1 Score: 316 bits (810), Expect = 9.170e-99
Identity = 319/388 (82.22%), Postives = 321/388 (82.73%), Query Frame = 0
Query:    1 MKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPRKIPKTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGKRGMIQALQSGSKLAASLSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LALGAPFQXXXXLRWGMQDXXXXXASSSGYGGSDRSGSSGTDASSGDDPCLGSFTATIDGFGSRRSSLGNGFGLGGGDRRFSLDAAAADPASTCASGLPFYFEPLESGXXXXXXXXVVAVDGPXXXXAEAEQVAAVSMMAARRTSLEEALYGACYRRASFQGL 387
            MKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPRKIPKTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 TGKRGMI ALQSGSKLAASLSK     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      LALGAPFQ    LRWGMQD     ASSSGYGGSDRSGSSGTDASSGDDPCL SFTATIDGFGSRRSSLGNGFGL GGDRRF LDAAAADPAS C SGLPFYFEPL+SG XXXXX   VAVDGP    A+AEQVAAVSMMAARRTSLEEALYGACYRRASFQGL
Sbjct:   33 MKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPRKIPKTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRSSLPPFGGGRGAGRGTGKRGMIPALQSGSKLAASLSKKMKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQHEIRIINDERPSPSAAVGGGVLALGAPFQQQQQLRWGMQDDGGASASSSGYGGSDRSGSSGTDASSGDDPCLDSFTATIDGFGSRRSSLGNGFGLDGGDRRFGLDAAAADPASACGSGLPFYFEPLKSGGXXXXXERGVAVDGPGGGNADAEQVAAVSMMAARRTSLEEALYGACYRRASFQGL 420          
BLAST of mRNA_Ecto-sp9_F_contig9804.17895.1 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L009_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 2.140e-5
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    1 MKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPRKI 45
            +KR C G  PC+LC RR+K C RS +K+SGPAKGTKY  R+ R +
Sbjct:   20 LKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRSV 64          
BLAST of mRNA_Ecto-sp9_F_contig9804.17895.1 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF9_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 2.150e-5
Identity = 26/45 (57.78%), Postives = 33/45 (73.33%), Query Frame = 0
Query:    1 MKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPRKI 45
            +KR C G  PC+LC RR+K C RS +K+SGPAKGTKY  R+ R +
Sbjct:   28 LKRACDGKNPCSLCARRHKPCTRSARKKSGPAKGTKYAPRRKRSV 72          
BLAST of mRNA_Ecto-sp9_F_contig9804.17895.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F3_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 9.350e-5
Identity = 25/43 (58.14%), Postives = 32/43 (74.42%), Query Frame = 0
Query:    1 MKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPR 43
            +KR C G +PC LC RR + C RS+K++SGPAKGTKY  R+ R
Sbjct:   44 LKRACDGQSPCQLCLRRRETCTRSVKRKSGPAKGTKYTTRRVR 86          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9804.17895.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
Uncharacterized2.910e-10772.67protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Zinc9.170e-9982.22finger transcriptional regulator n=1 Tax=Ectocarpu... [more]
Zn(2)-C62.140e-557.78fungal-type domain-containing protein n=1 Tax=Ecto... [more]
Zn(2)-C62.150e-557.78fungal-type domain-containing protein n=1 Tax=Ecto... [more]
Uncharacterized9.350e-558.14protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 477..505
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 86..510
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 86..510

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9804contigEcto-sp9_F_contig9804:559..3808 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9804.17895.1mRNA_Ecto-sp9_F_contig9804.17895.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9804 553..3808 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9804.17895.1 ID=prot_Ecto-sp9_F_contig9804.17895.1|Name=mRNA_Ecto-sp9_F_contig9804.17895.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=570bp
MKRGCSGGTPCALCNRRNKNCIRSIKKRSGPAKGTKYCKRKPRKIPKTSS
SSSTTSTSTSTTPSAAASKPPPPSPSASSSSSSSRATGGGASAAACAASA
SSGGPSAAAAAAAPRSSLPPFGGGGGAGGGTGKRGMIQALQSGSKLAASL
SKKMKREGGAAAARVRRTPPPPPPPLGGGGGGVISARPGGMALPGGGTLL
PPQHETRIINDERPSPSAAVGGGVLALGAPFQQQQQLRWGMQDDGGASAS
SSGYGGSDRSGSSGTDASSGDDPCLGSFTATIDGFGSRRSSLGNGFGLGG
GDRRFSLDAAAADPASTCASGLPFYFEPLESGGGGGGGERVVAVDGPGGG
NAEAEQVAAVSMMAARRTSLEEALYGACYRRASFQGLQASAAVTAPSTLA
HSHHQLQHHQHHTSSSEDLPWNQLVHQADVTGQWGVRTAATAAEGNDQPA
GDSKMFSTSLYLSAGFGGGGEAKAAPARQQQQQQQQQQQQQQQQQQQQQQ
RQRQQSFSAMPFPATSMLSPYDPDRFALDGGVGPGASTTLKDLLFDNNRW
SHQPPLSSLNELPMMESTT*
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