prot_Ecto-sp9_F_contig977.17864.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig977.17864.1
Unique Nameprot_Ecto-sp9_F_contig977.17864.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length246
Homology
BLAST of mRNA_Ecto-sp9_F_contig977.17864.1 vs.
Match: Thylakoid (lumenal 15 kDa protein, chloroplast (P15) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7U8_ECTSI)

HSP 1 Score: 394 bits (1012), Expect = 3.730e-137
Identity = 241/245 (98.37%), Postives = 242/245 (98.78%), Query Frame = 0
Query:    1 MATMIMKGLVVSAGVAGAAGFVPPSAGRCTAWRGRQVTMNLFNDAARCVPAVLLGVALTTSAPLLDSPAAHTAVLGASPVFADDKGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVGTRDSLGCP 245
            MATMIMKGLVVSAGVAG AGFVPPSAGRCTAWRGRQVTMNLFNDAARCVPAVLLGV LTTSAPLLDSPAAHTAVLGASPVFADDKGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGL+TAKGTNPVSGV TRDSLGCP
Sbjct:    1 MATMIMKGLVVSAGVAGVAGFVPPSAGRCTAWRGRQVTMNLFNDAARCVPAVLLGVTLTTSAPLLDSPAAHTAVLGASPVFADDKGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLETAKGTNPVSGVDTRDSLGCP 245          
BLAST of mRNA_Ecto-sp9_F_contig977.17864.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUD1_9STRA)

HSP 1 Score: 166 bits (421), Expect = 1.160e-47
Identity = 115/160 (71.88%), Postives = 130/160 (81.25%), Query Frame = 0
Query:   85 KGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVGTRDSLGC 244
            +G SSVSD+K+  GAAST D G+RK +TRGVN+ENAD+H KD+S VSFQQSLVRGTNF ++KL+ +GFFDA     XXXXXXXXXXXXXXXXXXXXXXXXX     YVSGATK EP  IEGADFTDTFLRKDQ+ YLC +  AKGTNPV+GV T DSL C
Sbjct:   75 EGASSVSDTKMLSGAASTLDTGSRKIITRGVNLENADFHGKDMSGVSFQQSLVRGTNFASSKLIGSGFFDADLSNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVSGATKFEPKDIEGADFTDTFLRKDQIMYLCAI--AKGTNPVTGVDTADSLSC 232          
BLAST of mRNA_Ecto-sp9_F_contig977.17864.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVZ3_9STRA)

HSP 1 Score: 129 bits (323), Expect = 2.730e-33
Identity = 106/175 (60.57%), Postives = 127/175 (72.57%), Query Frame = 0
Query:   74 VLGASPVFAD-DKGMSSVSDSKLSVGAAST--GDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVGTRDSLGCP 245
            +L A+P FA+ D G S+V ++K+  G AST    +GARKT+TRGV ++ A++  +DL+ VSFQQS +RG  F+  KL+ A FFDA   XXXXXXXXXXXXXXXXXXXXXXXXXXX        GAT  + A IEGADFTDTFLRKDQ + LC   TAKGTNP +GV TRDSL CP
Sbjct:   36 LLSATPAFAESDGGASNVENTKIMNGGASTIVNQRGARKTITRGVQLDKANFAGEDLTGVSFQQSQIRGGVFEKTKLLGASFFDATLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSFKDAKIEGADFTDTFLRKDQQKELCA--TAKGTNPTTGVDTRDSLMCP 208          
BLAST of mRNA_Ecto-sp9_F_contig977.17864.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2G1_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.250e-28
Identity = 95/154 (61.69%), Postives = 116/154 (75.32%), Query Frame = 0
Query:   92 DSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVGTRDSLGCP 245
            D K+  G+AST + G  KT+TRGVNIENA++  KDL++VSFQQSLVR  NF+ AK ++A FFDA   XXXXXXXXXXXXXXXXXXXXXXXXXXX     YVSGAT++    IEG+D++ TFLRKDQ  YLC    A G NP++ + T++SL CP
Sbjct:  171 DFKIKKGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVSGATRLTDIQIEGSDWSGTFLRKDQQTYLC--KRASGVNPITKISTKESLLCP 322          
BLAST of mRNA_Ecto-sp9_F_contig977.17864.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZI41_9STRA)

HSP 1 Score: 115 bits (289), Expect = 6.040e-28
Identity = 80/167 (47.90%), Postives = 107/167 (64.07%), Query Frame = 0
Query:   79 PVFADDKGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPA-IIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVGTRDSLGC 244
            P FAD +G ++ S++K++ G AST   G    +TRGVN++N+++  ++L  V+FQQS+VR +NFK A  V       XXXXXXXXXXXX                  ++ E YVSGAT  E    IEG+D+++TFLRKDQ +YLC   TAKGTNPV+GV TR+SL C
Sbjct:   68 PAFAD-QGATAASNAKITTGGASTLQSGRTIAITRGVNLDNSNFXGQNLKGVAFQQSIVRDSNFKGANXVXXXXXXXXXXXXXXXXXXXTLSNVEMAQFNRANLKNTVMKEVYVSGATLFEGVKSIEGSDWSETFLRKDQQKYLCEHPTAKGTNPVTGVDTRESLMC 233          
BLAST of mRNA_Ecto-sp9_F_contig977.17864.1 vs.
Match: Hypothetical (protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Y7I5_9EUKA)

HSP 1 Score: 113 bits (282), Expect = 8.590e-27
Identity = 98/158 (62.03%), Postives = 119/158 (75.32%), Query Frame = 0
Query:   91 SDSKLSVGAAST-GDKGARKT---VTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVGTRDSLGC 244
            SDSK++ GAAST GDKG        TRGV ++ +D+  KDLS VSFQQS+VR TNF          FD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++ EAY+SG+T +    I+ +D+TDTF+RKDQ++YLC +  A GTNP +GVGTR+SLGC
Sbjct:   91 SDSKIAKGAASTSGDKGIAAQSGIATRGVILDYSDFSGKDLSGVSFQQSIVRKTNFXXXXXXXXXXFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIINEAYISGSTVLRDINIKDSDWTDTFVRKDQLQYLCQI--ASGTNPTTGVGTRESLGC 246          
BLAST of mRNA_Ecto-sp9_F_contig977.17864.1 vs.
Match: Hypothetical (protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TUI3_9EUKA)

HSP 1 Score: 113 bits (282), Expect = 8.990e-27
Identity = 98/158 (62.03%), Postives = 119/158 (75.32%), Query Frame = 0
Query:   91 SDSKLSVGAAST-GDKGARKT---VTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVGTRDSLGC 244
            SDSK++ GAAST GDKG        TRGV ++ +D+  KDLS VSFQQS+VR TNF          FD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++ EAY+SG+T +    I+ +D+TDTF+RKDQ++YLC +  A GTNP +GVGTR+SLGC
Sbjct:   93 SDSKIAKGAASTSGDKGIAAQSGIATRGVILDYSDFSGKDLSGVSFQQSIVRKTNFXXXXXXXXXXFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIINEAYISGSTVLRDINIKDSDWTDTFVRKDQLQYLCQI--ASGTNPTTGVGTRESLGC 248          
BLAST of mRNA_Ecto-sp9_F_contig977.17864.1 vs.
Match: Rhomboid (domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRG8_9STRA)

HSP 1 Score: 115 bits (289), Expect = 4.360e-26
Identity = 95/151 (62.91%), Postives = 114/151 (75.50%), Query Frame = 0
Query:   92 DSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVGTRDSL 242
            D K+  G+AST + G  KT+TRGVNIENA++  KDL++VSFQQSLVR  NF+ AK ++A FFDA   XXXXXXXXXXXXXXXXXXXXXXXXXXX     YVSGAT++    IEG+D++ TFLRKDQ  YLC    A G NPV+ V T++SL
Sbjct:   70 DFKIKRGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVSGATRLTDIQIEGSDWSGTFLRKDQQTYLC--KRASGVNPVTKVSTKESL 218          
BLAST of mRNA_Ecto-sp9_F_contig977.17864.1 vs.
Match: Uncharacterized (protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FD64_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.170e-25
Identity = 84/168 (50.00%), Postives = 116/168 (69.05%), Query Frame = 0
Query:   79 PVFA-DDKGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAI-IEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVGTRDSLGC 244
            P FA +  G ++ +++K++ G AST   G    +TRGVN++ +D+ +++L  V+FQQS+VR +NFK   L  + FF  XXXXXXXXXXXXXXXXXXXXXX        ++ E YVSG+T  E    IEG+D+++T+LR DQ + LC   T+KGTNPV+GV TR+SL C
Sbjct:   18 PAFAVEGGGATTAANAKITTGGASTLQSGRTIAITRGVNLDRSDFSNQNLKGVAFQQSIVRDSNFKGCNLYGSSFFXXXXXXXXXXXXXXXXXXXXXXXXNRANLHNTIMREVYVSGSTLFEGIKDIEGSDWSETYLRADQKKLLCEHPTSKGTNPVTGVNTRESLMC 185          
BLAST of mRNA_Ecto-sp9_F_contig977.17864.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TH33_HEMAN)

HSP 1 Score: 109 bits (272), Expect = 2.700e-25
Identity = 94/151 (62.25%), Postives = 110/151 (72.85%), Query Frame = 0
Query:   94 KLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVGTRDSLGC 244
            K+  GAAST D G+R+T+TRG  ++N+ +  + L  +SFQQSL R  +FK A L  A     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+V EAY+   TK++   IEGADFTDTFLRKDQ RYLC    A GTNP +GV T DSL C
Sbjct:   89 KVLQGAASTQDSGSRRTITRGATLDNSRFDGQKLDGISFQQSLCRDCDFKGASLKGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVNEAYILATTKLDGINIEGADFTDTFLRKDQQRYLCSR--ASGTNPKTGVDTYDSLLC 237          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig977.17864.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Thylakoid3.730e-13798.37lumenal 15 kDa protein, chloroplast (P15) n=2 Tax=... [more]
Uncharacterized1.160e-4771.88protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical2.730e-3360.57protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Uncharacterized2.250e-2861.69protein n=1 Tax=Nannochloropsis gaditana TaxID=725... [more]
Uncharacterized6.040e-2847.90protein n=1 Tax=Pseudo-nitzschia multistriata TaxI... [more]
Hypothetical8.590e-2762.03protein n=1 Tax=Lotharella globosa TaxID=91324 Rep... [more]
Hypothetical8.990e-2762.03protein n=1 Tax=Lotharella oceanica TaxID=641309 R... [more]
Rhomboid4.360e-2662.91domain-containing protein n=1 Tax=Nannochloropsis ... [more]
Uncharacterized1.170e-2550.00protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 ... [more]
Hypothetical2.700e-2562.25protein n=1 Tax=Hemiselmis andersenii TaxID=464988... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001646Pentapeptide repeatPFAMPF13599Pentapeptide_4coord: 117..186
e-value: 2.2E-8
score: 34.1
NoneNo IPR availableGENE3D2.160.20.100coord: 101..245
e-value: 4.3E-34
score: 118.8
NoneNo IPR availablePANTHERPTHR47200FAMILY NOT NAMEDcoord: 41..244
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..245
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..20
score: 0.526
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 112..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig977contigEcto-sp9_F_contig977:12008..15081 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig977.17864.1mRNA_Ecto-sp9_F_contig977.17864.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig977 12008..15081 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig977.17864.1 ID=prot_Ecto-sp9_F_contig977.17864.1|Name=mRNA_Ecto-sp9_F_contig977.17864.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=246bp
MATMIMKGLVVSAGVAGAAGFVPPSAGRCTAWRGRQVTMNLFNDAARCVP
AVLLGVALTTSAPLLDSPAAHTAVLGASPVFADDKGMSSVSDSKLSVGAA
STGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAA
GFFDADLSNCNFESANMNQANLELANLSGANMKNALVTEAYVSGATKMEP
AIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVGTRDSLGCP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0016465peptide_repeat