mRNA_Ecto-sp9_F_contig9756.17855.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig9756.17855.1
Unique NamemRNA_Ecto-sp9_F_contig9756.17855.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 524 bits (1349), Expect = 5.170e-173
Identity = 275/313 (87.86%), Postives = 294/313 (93.93%), Query Frame = 1
Query:   28 LENMRPPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWEIE 966
            L ++ PPSLPDMAAVP GAL+LP SSYVERAAVQEVADGLT+P+E  +P+TVVGMGGGGKSVLASA VRKPSVREHFRGG+FWVRVGRGAKSSLL LLQG+A ++GAAPTDAP GVPHVLD LEQVQ+HLAAVASTGTSPRLVVLDDVWEREVVDA VPLGFKVLLTTRDRSVVG+ AGR ELGDMTEE ALELLRKTSGTVGQPGDDVR KMTKVVALCGHLPLVLA+AGSMS V+GKGL+AVAWEELAKELENVAKKMRARG+QSSS+KVVLETSFDSLA RKQEEFLKMAVLAAGALAPIEML NLWE+E
Sbjct:  248 LPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQEVADGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEVE 560          
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 520 bits (1339), Expect = 4.080e-169
Identity = 274/313 (87.54%), Postives = 294/313 (93.93%), Query Frame = 1
Query:   28 LENMRPPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWEIE 966
            L ++ PPSLPDMAAVPAGAL+LP SSYVERAAVQEVADGLT+P+E  +P+TVVGMGGGGKSVLASAVVRKPSVREHFRGG+FWVRVGRGAKSSLL LLQG+AR++GAAPTDAP GVP VLDSLEQV++HLAAV STGTS RLVVLDDVWEREVVDA VPLGFKVLLTTRDRSVVG+ AGR ELGD+TEE ALELLRKTSG VGQPGDDVR KMTKVVALCGHLPLVLA+AGSMS V+GKGL+AVAWEELAKELENVAKKMRARG+QSSS+KVVLETSFDSLA RKQEEFLKMAVLAAGALAPIEML NLWEIE
Sbjct:  231 LPSLLPPSLPDMAAVPAGALELPSSSYVERAAVQEVADGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEIE 543          
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI)

HSP 1 Score: 514 bits (1323), Expect = 5.780e-168
Identity = 273/322 (84.78%), Postives = 295/322 (91.61%), Query Frame = 1
Query:    1 INAEALKIVLENMRPPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWEIE 966
            ++A A K +  ++ PPSLPDMA VP GAL+LPHSSYVERAAVQEVADGLT+P+EP +P+TVVG+GGGGKSVLASAVVR PSVREHFRGG+ WVRVGRGAK+SLLPLLQG+ARE+GAAPTDAP GVPH LDSLEQVQ+HLAAVAST  SPRLVVLDDVWEREVVDA VPLGFK+LLTTRDRS+V   AGR ELGDMTEE ALELLRKTSGTV  PGDDVRMKMTKVVALCGHLPLVLA+AGSMSAVKGKGL+AVAWEELAKE ENVAKKMRARGQQSSSIKVVLET+FDSLA RKQ+EFL MAVLAAGALAPIEML NLWEIE
Sbjct:   24 VDAIAAKRIFTDILPPSLPDMAEVPVGALELPHSSYVERAAVQEVADGLTNPEEPRTPYTVVGIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSGTV-DPGDDVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKEFENVAKKMRARGQQSSSIKVVLETTFDSLATRKQKEFLMMAVLAAGALAPIEMLSNLWEIE 344          
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 491 bits (1265), Expect = 1.690e-167
Identity = 269/342 (78.65%), Postives = 289/342 (84.50%), Query Frame = 1
Query:   28 LENMRPPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAG-----------------------------ALAPIEMLGNLWEIE 966
            L ++ PPSLPDMAAVPAGAL+LP SSYVERAAVQEVADGLTSP++P +P+TVVGMGGGGKSVLASAVVRKPSVREHFRGG+FWVRVGRGAKSSLL LLQG+AREMGAA TDAP  VPHVLD LEQV++HLAAVASTGT PRLVVLDDVWEREVVDA VPLGFKVLLTTRDRSVV + AGR E+GDMTEE ALELLRK+SG VGQPGDDVR KMTKVVALCGHLPLVLA+AGSMS VKGKGL+AVAW+ELA+ LENVAKKMRARG+QSSSI  VLETSFDSLA RKQEEFLK+AVLAA                              ALAPIEML NLWEIE
Sbjct:  194 LPSLLPPSLPDMAAVPAGALELPCSSYVERAAVQEVADGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSINAVLETSFDSLAVRKQEEFLKLAVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPIEMLRNLWEIE 535          
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI)

HSP 1 Score: 501 bits (1290), Expect = 4.160e-159
Identity = 271/314 (86.31%), Postives = 290/314 (92.36%), Query Frame = 1
Query:   28 LENMRPPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAV-ASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWEIE 966
            L ++RPP L DMAAVPAGALDLP   YVERAAVQEVADGLT+P+EP +P+TVVG+GGGGKSVLASAVVRKPSVREHFRGG+ WVRVGRGAK+SLLPLLQG+AREMG APTDAP  VP VLDSLEQVQ+HLAAV ASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRD SVV + A R +LGDMTEE ALELLRKTSGTVGQPGD VRMKMTKVVALCGHLPLVLA+AGSMSAVKGKGL+AVAWEELAK  ENVAKKMRARGQQSS+IKVVLETSFDSLA +KQEEFL+M+VLAAGALAPIEML NLWEIE
Sbjct:  206 LPSLRPPRLLDMAAVPAGALDLPRG-YVERAAVQEVADGLTAPEEPRAPYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRLDLGDMTEEEALELLRKTSGTVGQPGDYVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKSFENVAKKMRARGQQSSAIKVVLETSFDSLAVQKQEEFLRMSVLAAGALAPIEMLRNLWEIE 518          
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 456 bits (1172), Expect = 1.700e-155
Identity = 244/302 (80.79%), Postives = 266/302 (88.08%), Query Frame = 1
Query:   61 MAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWEIE 966
            MAAVPAGAL LP S YVERAAVQEVADGL  P+EP +P+ VVGMGGGGK++L SAVVRK +VREHFRGG+FW+RVGR AK+SLL LLQG+AREM AAPTD P GVPHVL+SLEQV++HLA VAS GTSPRLVVLDDVWEREVVDAL+ LG KVL+TTRDRSVVG+  G  ELGDMTEE ALELL KTS TVGQPG +VR +MTKVV LCGHLPLVLA+AGSMS VKGKGL+AVAWEEL KE ENVAKKMR RG+QSSSIKVVL TSFD+LAARKQEE LKM VLAAGALAPIEML NLWEIE
Sbjct:    1 MAAVPAGALTLPQS-YVERAAVQEVADGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELLLKTSRTVGQPGHEVRTQMTKVVVLCGHLPLVLAIAGSMSVVKGKGLTAVAWEELIKEFENVAKKMRVRGEQSSSIKVVLGTSFDALAARKQEESLKMTVLAAGALAPIEMLRNLWEIE 301          
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 427 bits (1097), Expect = 1.590e-137
Identity = 230/322 (71.43%), Postives = 262/322 (81.37%), Query Frame = 1
Query:    1 INAEALKIVLENMRPPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWEIE 966
            ++A + K     + PPSLPDMA VPA A+ L  S YVERAAV++VADG+T+P+EP +P+TV GMGGGGKSVLASAVVRK SVREHFRGG+FW+ VGRGAK  LLPLLQG+  +MGAAPTD P GVPHVLDSLEQVQ+HL AVASTGTSPRLVVLDDVWEREVVDAL+PLGFKVL+TTRDRSVVG+     ELGDMTEE ALELL KTSGTVG+PGD VR  MTKVV LCG LPLVLA+AGS+  VKGKGL+A AW +L  ELENV  KM A  + S+S+ VVLETSFD+L  RK++ F K AVLA GA+A  EML NLWE E
Sbjct:  116 LDAISAKGATGTVLPPSLPDMAKVPAEAVALSDSLYVERAAVRKVADGITNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVASTGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRCLELGDMTEEEALELLLKTSGTVGRPGDSVRTVMTKVVTLCGRLPLVLAIAGSLPVVKGKGLTAGAWGKLIDELENVVTKMEASLEDSNSLNVVLETSFDALTFRKKQAFKKTAVLAPGAVASTEMLLNLWETE 437          
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI)

HSP 1 Score: 394 bits (1012), Expect = 7.080e-125
Identity = 211/319 (66.14%), Postives = 250/319 (78.37%), Query Frame = 1
Query:   10 EALKIVLENMRPPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWEIE 966
            +A   ++ ++ PP+LP  AAVP GAL LP S YVER  VQE    L  P++ L+P+ +VGMGGGGK+VLASA+VRK SV EHFRGG+FW+ +GRGA  SLL  LQG+AREMGAAPTDAP GVPHV DSLEQV +HLAAV S G+SPRLVVLDDVWEREVV A + +G KVL+TTRDRS+VG+  G  ELGDM E+ ALELL KTSGTVGQPGD VR +MTKVV  CG LPLVLA+AGSM  VKGKGL   AWEEL +E ENV   M   G++S ++ +VL  SF++LAARK+EEFL+MAVLA GA+AP EML NLWEI+
Sbjct:  220 KAFSTMIRDVLPPTLPQRAAVPTGALALPRS-YVERPGVQEAMGDLMDPEKALAPYMIVGMGGGGKTVLASALVRKSSVLEHFRGGIFWMEMGRGANKSLLHRLQGLAREMGAAPTDAPHGVPHVFDSLEQVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLLELGDMAEDEALELLWKTSGTVGQPGDGVRTQMTKVVDRCGRLPLVLAIAGSMPVVKGKGLKDGAWEELIEEFENVTTIMWEPGEESRNLDMVLGASFNALAARKREEFLRMAVLAPGAVAPFEMLRNLWEIQ 537          
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQU6_9PHAE)

HSP 1 Score: 286 bits (732), Expect = 1.760e-87
Identity = 172/307 (56.03%), Postives = 213/307 (69.38%), Query Frame = 1
Query:   49 SLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKEL-ENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWEIE 966
            SL + AAVPAGA  LPH  YV R+ V++  +GL + +EP +PF VVGM G GK+VL SAVVR   VREHF GG+FW+RVGRGAK+SLLPL+Q +AREMGA       GVP+VLD LEQV +H+AAVASTGTSPRLVVLDDVWEREVVDAL+ L  KVL+TTRD SVVG+   R E  DM E+ A+ELL KTS     P +    K+ K     G     LA    +  +     +A AW+E+ K L EN+A+ +R RG Q  S+ VVLE+SFD+LA RKQEE + M V+A  ++AP EML NLWE++
Sbjct:   89 SLSNRAAVPAGAHGLPHY-YVARSVVRKAVEGLINAEEPSAPFVVVGMSGAGKTVLVSAVVRHLRVREHFHGGIFWMRVGRGAKTSLLPLMQTLAREMGAH------GVPYVLDGLEQVGQHVAAVASTGTSPRLVVLDDVWEREVVDALLRLKLKVLVTTRDHSVVGVPGTRLEPEDMAEDEAMELLLKTS----VPKNKALEKLIKAAMTVGRPANFLAQMTKVREIM-TAAAAAAWDEMVKLLNENMARFLRLRGDQLPSLNVVLESSFDALAIRKQEEPIMMVVIAPRSIAPREMLENLWELQ 383          
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW28_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 6.480e-73
Identity = 162/306 (52.94%), Postives = 186/306 (60.78%), Query Frame = 1
Query:   43 PPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVVGMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAREMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*ALELLRKTSGTVGQPGDDVRMKMTKVVALCGHLPLVLAVAGSMSAVKGKGLSAVAWEELAKELENVAKKMRARGQQSSSIKVVLETSFDSLAARKQEEFLKMAVLAAGALAPIEMLGNLWE 960
            PPSLPDMAAVPAGAL LPHS YVERAAVQEVADGLT+P+EP +P++ VGMGGGGKSVLASAVVRK SV +HFRGG  W                              LG P                     SPRLVVLDDVWE EVVDAL+PLG KVL+TT DRSV+G+ +G  E+GDMTE  ALELLRKTS TVG+         T  V             G  +  + KGL+A AW +L  ELE+VA KM A  + S S+ VVLETSF++L   K+ EF K AVLA GA+   EML NLWE
Sbjct:  160 PPSLPDMAAVPAGALALPHS-YVERAAVQEVADGLTNPEEPRAPYSAVGMGGGGKSVLASAVVRKSSVTQHFRGGR-WA-----------------------------LGHPRA-------------------SPRLVVLDDVWEPEVVDALLPLGLKVLVTTIDRSVLGVSSGCVEVGDMTEGEALELLRKTSRTVGRCA-----LWTSTVGARDR--------GFHARRERKGLTAGAWGKLI-ELEDVATKMEASDEDSDSLNVVLETSFNALTLTKKREFKKSAVLAPGAVVSTEMLLNLWE 401          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9756.17855.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
NB-ARC5.170e-17387.86and TPR repeat-containing protein n=1 Tax=Ectocarp... [more]
NB-ARC4.080e-16987.54and TPR repeat-containing protein n=1 Tax=Ectocarp... [more]
NB-ARC5.780e-16884.78and TPR repeat-containing protein n=1 Tax=Ectocarp... [more]
NB-ARC1.690e-16778.65domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
NB-ARC4.160e-15986.31and TPR repeat-containing protein n=1 Tax=Ectocarp... [more]
NB-ARC1.700e-15580.79domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
NB-ARC1.590e-13771.43domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
NB-ARC7.080e-12566.14and TPR repeat-containig protein n=1 Tax=Ectocarpu... [more]
NB-ARC1.760e-8756.03domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized6.480e-7352.94protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9756contigEcto-sp9_F_contig9756:2405..3889 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score315.1
Seed ortholog evalue2.2e-83
Seed eggNOG ortholog2880.D7G722
KEGG koko:K10407
KEGG Pathwayko05132,map05132
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759,KOG4658@1,KOG4658@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Hectar predicted targeting categoryother localisation
Exons2
Model size967
Cds size561
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9756.17855.1prot_Ecto-sp9_F_contig9756.17855.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig9756 3293..3853 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931066.9103265-UTR-Ecto-sp9_F_contig9756:2404..26991622931066.9103265-UTR-Ecto-sp9_F_contig9756:2404..2699Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig9756 2405..2699 -
1692279017.0844924-UTR-Ecto-sp9_F_contig9756:2404..26991692279017.0844924-UTR-Ecto-sp9_F_contig9756:2404..2699Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig9756 2405..2699 -
1622931066.9305367-UTR-Ecto-sp9_F_contig9756:3217..32921622931066.9305367-UTR-Ecto-sp9_F_contig9756:3217..3292Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig9756 3218..3292 -
1692279017.1246502-UTR-Ecto-sp9_F_contig9756:3217..32921692279017.1246502-UTR-Ecto-sp9_F_contig9756:3217..3292Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig9756 3218..3292 -
1622931066.9651396-UTR-Ecto-sp9_F_contig9756:3853..38891622931066.9651396-UTR-Ecto-sp9_F_contig9756:3853..3889Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig9756 3854..3889 -
1692279017.1760092-UTR-Ecto-sp9_F_contig9756:3853..38891692279017.1760092-UTR-Ecto-sp9_F_contig9756:3853..3889Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig9756 3854..3889 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931066.9476867-CDS-Ecto-sp9_F_contig9756:3292..38531622931066.9476867-CDS-Ecto-sp9_F_contig9756:3292..3853Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9756 3293..3853 -
1692279017.1625612-CDS-Ecto-sp9_F_contig9756:3292..38531692279017.1625612-CDS-Ecto-sp9_F_contig9756:3292..3853Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9756 3293..3853 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig9756.17855.1

>prot_Ecto-sp9_F_contig9756.17855.1 ID=prot_Ecto-sp9_F_contig9756.17855.1|Name=mRNA_Ecto-sp9_F_contig9756.17855.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=187bp
MRPPSLPDMAAVPAGALDLPHSSYVERAAVQEVADGLTSPKEPLSPFTVV
GMGGGGKSVLASAVVRKPSVREHFRGGMFWVRVGRGAKSSLLPLLQGVAR
EMGAAPTDAPLGVPHVLDSLEQVQKHLAAVASTGTSPRLVVLDDVWEREV
VDALVPLGFKVLLTTRDRSVVGMLAGRFELGDMTEE*
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mRNA from alignment at Ecto-sp9_F_contig9756:2405..3889-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig9756.17855.1 ID=mRNA_Ecto-sp9_F_contig9756.17855.1|Name=mRNA_Ecto-sp9_F_contig9756.17855.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1485bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9756:2405..3889- (Ectocarpus species9 EcSCA_722f female)
ATCAACGCGGAGGCGTTGAAAATTGTTTTGGAAAACATGCGCCCTCCAAG CTTGCCGGACATGGCCGCGGTCCCCGCAGGAGCGCTTGACTTGCCCCACA GCAGCTACGTCGAGCGAGCTGCGGTACAAGAAGTTGCCGACGGCCTCACC TCCCCGAAGGAGCCCCTTTCCCCCTTCACCGTCGTCGGCATGGGTGGAGG GGGAAAGAGCGTGCTGGCCTCTGCTGTCGTTCGCAAGCCGAGTGTGAGGG AACACTTCCGCGGCGGTATGTTCTGGGTGAGAGTGGGGAGGGGCGCGAAG AGCAGCCTCCTTCCTCTCCTCCAGGGCGTGGCCAGGGAGATGGGCGCCGC GCCGACGGATGCTCCGCTCGGGGTGCCTCACGTCCTTGACAGCCTCGAGC AGGTACAGAAGCACCTGGCTGCAGTCGCATCCACCGGCACCTCGCCACGC CTGGTGGTGCTGGACGATGTGTGGGAGCGCGAGGTCGTGGACGCGCTTGT TCCTCTGGGATTTAAGGTGCTGCTTACCACGCGTGATCGATCGGTTGTCG GTATGCTGGCCGGACGCTTCGAGCTGGGAGACATGACGGAGGAATAGGCG CTGGAGCTGCTGCGGAAGACAAGCGGGACTGTGGGTCAGCCTGGGGACGA TGTTCGGATGAAGATGACCAAGGTGATCGATGCGCCATGAATCTCACGTG GACAACGTGTATCAGGGTGTGCTTGTTTTGCAGATTCATAGCTTTATTCA TTGATTGTCTGCTTGACTGCCGCCTGGATTTGAGCTTGGCATCGGTTGGT GGCTTGATGCTAAATGTCACAGGTGCTTATGCGACGAACAAGGCACGTCG AGGTTGGTTTGGTGTGCGTCAGTCTGCTCTGATTGCAAGCCTCCCGTTCT CCGTGACGGCGAGAAAGGCATGAAACCGATGGCGGCTTTGATGTTGAGTG GTGCTTGCACTTGTTTATTTCGATGGTCAACCCACATCGTTGCTAACTAC CTCCCCGTGGAGCCTGCTCTATTATTCGCTTTGACTTGTATTTACGATGT ATGTCGGATGCGTTAATCGTGTGGTAATGTCCCTCCATAGAGCTGTTGCG CCCTGTCTACATGGAAGAGTGATGCACTGCTGTCAAACACATCGTGCTCG ACTTGACTGAGCATTCAACTCCCGACGAACACCGATCCAGGTCGTTGCGC TCTGTGGACACCTGCCGTTGGTGCTCGCCGTCGCGGGTTCCATGTCCGCC GTGAAAGGGAAGGGCTTGAGCGCCGTCGCCTGGGAAGAGCTGGCCAAAGA GTTGGAGAATGTGGCCAAGAAAATGCGAGCTCGGGGCCAGCAGTCATCGT CTATCAAAGTGGTCCTTGAGACCAGTTTCGACTCCTTGGCAGCACGGAAG CAAGAAGAGTTTCTGAAGATGGCTGTGTTGGCCGCGGGTGCTCTTGCGCC GATCGAGATGCTGGGCAATCTGTGGGAGATAGAGG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9756:2405..3889-

>mRNA_Ecto-sp9_F_contig9756.17855.1 ID=mRNA_Ecto-sp9_F_contig9756.17855.1|Name=mRNA_Ecto-sp9_F_contig9756.17855.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1122bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9756:2405..3889- (Ectocarpus species9 EcSCA_722f female)
ATGCGCCCTCCAAGCTTGCCGGACATGGCCGCGGTCCCCGCAGGAGCGCT
TGACTTGCCCCACAGCAGCTACGTCGAGCGAGCTGCGGTACAAGAAGTTG
CCGACGGCCTCACCTCCCCGAAGGAGCCCCTTTCCCCCTTCACCGTCGTC
GGCATGGGTGGAGGGGGAAAGAGCGTGCTGGCCTCTGCTGTCGTTCGCAA
GCCGAGTGTGAGGGAACACTTCCGCGGCGGTATGTTCTGGGTGAGAGTGG
GGAGGGGCGCGAAGAGCAGCCTCCTTCCTCTCCTCCAGGGCGTGGCCAGG
GAGATGGGCGCCGCGCCGACGGATGCTCCGCTCGGGGTGCCTCACGTCCT
TGACAGCCTCGAGCAGGTACAGAAGCACCTGGCTGCAGTCGCATCCACCG
GCACCTCGCCACGCCTGGTGGTGCTGGACGATGTGTGGGAGCGCGAGGTC
GTGGACGCGCTTGTTCCTCTGGGATTTAAGGTGCTGCTTACCACGCGTGA
TCGATCGGTTGTCGGTATGCTGGCCGGACGCTTCGAGCTGGGAGACATGA
CGGAGGAATAGATGCGCCCTCCAAGCTTGCCGGACATGGCCGCGGTCCCC
GCAGGAGCGCTTGACTTGCCCCACAGCAGCTACGTCGAGCGAGCTGCGGT
ACAAGAAGTTGCCGACGGCCTCACCTCCCCGAAGGAGCCCCTTTCCCCCT
TCACCGTCGTCGGCATGGGTGGAGGGGGAAAGAGCGTGCTGGCCTCTGCT
GTCGTTCGCAAGCCGAGTGTGAGGGAACACTTCCGCGGCGGTATGTTCTG
GGTGAGAGTGGGGAGGGGCGCGAAGAGCAGCCTCCTTCCTCTCCTCCAGG
GCGTGGCCAGGGAGATGGGCGCCGCGCCGACGGATGCTCCGCTCGGGGTG
CCTCACGTCCTTGACAGCCTCGAGCAGGTACAGAAGCACCTGGCTGCAGT
CGCATCCACCGGCACCTCGCCACGCCTGGTGGTGCTGGACGATGTGTGGG
AGCGCGAGGTCGTGGACGCGCTTGTTCCTCTGGGATTTAAGGTGCTGCTT
ACCACGCGTGATCGATCGGTTGTCGGTATGCTGGCCGGACGCTTCGAGCT
GGGAGACATGACGGAGGAATAG
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