prot_Ecto-sp9_F_contig9751.17852.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9751.17852.1
Unique Nameprot_Ecto-sp9_F_contig9751.17852.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length89
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9751.17852.1 vs.
Match: GLOBIN (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC72_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 5.160e-33
Identity = 75/89 (84.27%), Postives = 78/89 (87.64%), Query Frame = 0 
Query:    1 TRALALDVAQTFVQNVLSERSKDKRSSKIRRRAFKELLAHLIPLMLDCLKSPAGSSNSSSPRDENASPGINSSLGGAGGQGRGEGFEDG 89
            TRALALDVAQTFVQNV+SERSKDKRSSKIRR+AFKELLA LIPLMLDCLKSPAGSSNSS PR+ENAS      LGG GGQ RGEGF DG
Sbjct:  880 TRALALDVAQTFVQNVVSERSKDKRSSKIRRKAFKELLARLIPLMLDCLKSPAGSSNSSFPREENAS------LGGGGGQERGEGFGDG 962
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BLAST of mRNA_Ecto-sp9_F_contig9751.17852.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHK6_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 4.410e-30
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0 
Query:    1 TRALALDVAQTFVQNVLSERSKDKRSSKIRRRAFKELLAHLIPLMLDCLKSPAGSSNSSSPRDENASPG 69
            TRALALDVAQTFVQNVLSERSKDKRSSKIRRRAFKELLAHLIPLMLDCLKSP GSS+SSSPRDENAS G
Sbjct:   41 TRALALDVAQTFVQNVLSERSKDKRSSKIRRRAFKELLAHLIPLMLDCLKSPEGSSSSSSPRDENASLG 109
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9751.17852.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
GLOBIN5.160e-3384.27domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized4.410e-3095.65protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9751contigEcto-sp9_F_contig9751:2907..3713 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9751.17852.1mRNA_Ecto-sp9_F_contig9751.17852.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9751 2907..3713 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9751.17852.1 ID=prot_Ecto-sp9_F_contig9751.17852.1|Name=mRNA_Ecto-sp9_F_contig9751.17852.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=89bp
TRALALDVAQTFVQNVLSERSKDKRSSKIRRRAFKELLAHLIPLMLDCLK
SPAGSSNSSSPRDENASPGINSSLGGAGGQGRGEGFEDG
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