prot_Ecto-sp9_F_contig9737.17838.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9737.17838.1
Unique Nameprot_Ecto-sp9_F_contig9737.17838.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length363
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9737.17838.1 vs.
Match: Spherulin (4 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9D4_ECTSI)

HSP 1 Score: 679 bits (1751), Expect = 1.810e-243
Identity = 344/360 (95.56%), Postives = 348/360 (96.67%), Query Frame = 0 
Query:    8 FCSVRQLGVPETSDVSTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIAPLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDAGAKVLCYIEADKYGNDLATLEEVVETFTFFPLNEICGGFFFGAFNILLAIEDMPGMQSLYLKTQQKTFLQPTVVFAPEVQDYSDDFESSYSFSYDFVEVDEDDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVVAEAMDGGSVIPEAPEPNESTAALVTGYAGAPEG-----ERETAGRRRSERWLPEFKPHDTR 362
            F +VRQLGVPETSD+STPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIAPLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDAGAKVLCYIEADKYGNDLATLEEVVET+TFFPLNEICGGFFFGAFNILLAIEDMPGMQSLYLKTQ KTFLQPTVVFAPEVQDYSD FESSYSFSYDFVEVDEDDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVVAEA+DGGSVIPEAPEPNESTAALVTGYAGAPE      ER  AGRR SERWLPEFKPHDTR
Sbjct:  153 FKAVRQLGVPETSDISTPPQNMLLLHSATELAEKPELIQPFVDKAYCKGWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGGLKIIAPLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAAAVRDAGAKVLCYIEADKYGNDLATLEEVVETYTFFPLNEICGGFFFGAFNILLAIEDMPGMQSLYLKTQ-KTFLQPTVVFAPEVQDYSDGFESSYSFSYDFVEVDEDDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGATAGEIVVAEAIDGGSVIPEAPEPNESTAALVTGYAGAPENGDRERERRPAGRRPSERWLPEFKPHDTR 511
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9737.17838.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Spherulin1.810e-24395.564 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9D4_ECTSI[more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 14..362
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9737contigEcto-sp9_F_contig9737:606..4754 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9737.17838.1mRNA_Ecto-sp9_F_contig9737.17838.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9737 606..4754 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9737.17838.1 ID=prot_Ecto-sp9_F_contig9737.17838.1|Name=mRNA_Ecto-sp9_F_contig9737.17838.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=363bp
MVVLGVCFCSVRQLGVPETSDVSTPPQNMLLLHSATELAEKPELIQPFVD
KAYCKGWGTVYVTDDLFDEGNPWDNPPTFWTAFIEASRNIPTVESCGDGG
LKIIAPLLGNDDADTEAIMATADPGDYGDRIMVAMNVEITETGESTDRAA
AVRDAGAKVLCYIEADKYGNDLATLEEVVETFTFFPLNEICGGFFFGAFN
ILLAIEDMPGMQSLYLKTQQKTFLQPTVVFAPEVQDYSDDFESSYSFSYD
FVEVDEDDWYSTNNWDSTTNFELPWEDVMTETDLVALAESLTVGLGDGAT
AGEIVVAEAMDGGSVIPEAPEPNESTAALVTGYAGAPEGERETAGRRRSE
RWLPEFKPHDTR*
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