prot_Ecto-sp9_F_contig9726.17829.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9726.17829.1
Unique Nameprot_Ecto-sp9_F_contig9726.17829.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length434
Homology
BLAST of mRNA_Ecto-sp9_F_contig9726.17829.1 vs.
Match: CRAL-TRIO (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI30_9PHAE)

HSP 1 Score: 702 bits (1811), Expect = 4.880e-237
Identity = 387/437 (88.56%), Postives = 399/437 (91.30%), Query Frame = 0
Query:    1 VDREGDFVLTPVGSDGNNYAGDLDTSAGTDALDDAGSDNSGASV--EEGGVSAEAVAANLRGGGRGEGEDHSTGQPKRAIKLARGLSNVARRLTKRSVGSSEAMSLGRDNSYLRAHDADFDGDGLRSYTGGWSNSPTSPEHGERHRKLPQDWHLPLTSTSPVTPPLASPPPQADQGRPPRSSTSSRRHSPTTSGEILMPGLPPPRMPRITRGLTDPGSPCDNRRFEGAVTGVSSESRRKEDLLEKGGEGVCRAEARDQEGKPEVARGRPGLLAGSKSKSLSPKGGWEGIGQRHRSRSASPKRVNPFNRKPVSPS--GNGQDQDQTQGRGQDGQEGHTDQETSSFNPASPVTTSATPRSDEVTATQATSKAKLNAEKILHDKSRSDEVIKDHVKRGDSGHPPSVGEGVPAAPVKVPPCVPAALPPELKYGDRLRLKAR 433
            VDREGDFVLTPVGSDG NYAGDLDTSAGTDALDDAGSDNSGA V  EEGGVSAEAVAANLRGGGRGEGED STGQPKR+IKLARGLSNVARRLTKRSVGSSEA      N YLRAHDADFDGDG RSYTGGW NSPTSPEHGERHRKLPQDWH+PLTSTSPVTPPLASPPPQADQGRPPRSSTSSRR SPTTSGE+LMPGLPP ++PRITRG TDPGSP D+RRFEG VTGV +ESRRKEDLLEKG +GVCRAEAR+QEGKPEVARGRPGLL GS SKSLSPKGGWEGI +RHRSRSASPKRVNPFNRKPVSPS  GNGQDQDQTQGRGQDGQEGHTDQ TSSFNPASPVTTSATPRS+EVTA QATSKAKLNAEKIL  +SRSDEVI  HVKRGDSGHP SV E  PAAPVKV PCVPAA PPELKYGDRLRLKAR
Sbjct:  110 VDREGDFVLTPVGSDGTNYAGDLDTSAGTDALDDAGSDNSGAGVGVEEGGVSAEAVAANLRGGGRGEGEDRSTGQPKRSIKLARGLSNVARRLTKRSVGSSEA------NIYLRAHDADFDGDGDRSYTGGWGNSPTSPEHGERHRKLPQDWHVPLTSTSPVTPPLASPPPQADQGRPPRSSTSSRRPSPTTSGEMLMPGLPP-QLPRITRGFTDPGSPGDSRRFEGTVTGVGNESRRKEDLLEKGADGVCRAEAREQEGKPEVARGRPGLLEGSNSKSLSPKGGWEGIRERHRSRSASPKRVNPFNRKPVSPSSTGNGQDQDQTQGRGQDGQEGHTDQATSSFNPASPVTTSATPRSNEVTAPQATSKAKLNAEKILLGRSRSDEVIHGHVKRGDSGHPSSVVEDAPAAPVKVSPCVPAAQPPELKYGDRLRLKAR 539          
BLAST of mRNA_Ecto-sp9_F_contig9726.17829.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMT9_ECTSI)

HSP 1 Score: 553 bits (1425), Expect = 3.060e-194
Identity = 287/301 (95.35%), Postives = 294/301 (97.67%), Query Frame = 0
Query:    1 VDREGDFVLTPVGSDGNNYAGDLDTSAGTDALDDAGSDNSGASVEEGGVSAEAVAANLRGGGRGEGEDHSTGQPKRAIKLARGLSNVARRLTKRSVGSSEAMSLGRDNSYLRAHDADFDGDGLRSYTGGWSNSPTSPEHGERHRKLPQDWHLPLTSTSPVTPPLASPPPQADQGRPPRSSTSSRRHSPTTSGEILMPGLPPPRMPRITRGLTDPGSPCDNRRFEGAVTGVSSESRRKEDLLEKGGEGVCRAEARDQEGKPEVARGRPGLLAGSKSKSLSPKGGWEGIGQRHRSRSASPKRV 301
            VDREGDFVLTPVGSDGNNYAGDLDTSAGTDALDDAGSDNSGASVEEGGVSAEAVAANLRGGGRGEGEDHSTGQPKRA KLARGLSNVARRLTKRSVGSSEAMSLGRDNSYLRAHDADFDGDG RS+TGGWSNSPTSPEHGERHRKLPQDWHLPLTSTSPVTPP+ASPPPQADQGRPPRSSTSSRR SPTTSGE+LMPGLPPPRMPRITRGLTDPGSPCD+RRFEG VTGV SESRRKEDLLEKGGEGVCRAEAR+QEGKPEVARGR GLL GSKSKSLSPKGGWEG+G+RHRSRSASPKRV
Sbjct:  105 VDREGDFVLTPVGSDGNNYAGDLDTSAGTDALDDAGSDNSGASVEEGGVSAEAVAANLRGGGRGEGEDHSTGQPKRATKLARGLSNVARRLTKRSVGSSEAMSLGRDNSYLRAHDADFDGDGPRSFTGGWSNSPTSPEHGERHRKLPQDWHLPLTSTSPVTPPMASPPPQADQGRPPRSSTSSRRPSPTTSGEMLMPGLPPPRMPRITRGLTDPGSPCDHRRFEGTVTGVGSESRRKEDLLEKGGEGVCRAEAREQEGKPEVARGRRGLLEGSKSKSLSPKGGWEGVGERHRSRSASPKRV 405          
BLAST of mRNA_Ecto-sp9_F_contig9726.17829.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G345_ECTSI)

HSP 1 Score: 527 bits (1358), Expect = 4.320e-184
Identity = 278/301 (92.36%), Postives = 286/301 (95.02%), Query Frame = 0
Query:    1 VDREGDFVLTPVGSDGNNYAGDLDTSAGTDALDDAGSDNSGASVEEGGVSAEAVAANLRGGGRGEGEDHSTGQPKRAIKLARGLSNVARRLTKRSVGSSEAMSLGRDNSYLRAHDADFDGDGLRSYTGGWSNSPTSPEHGERHRKLPQDWHLPLTSTSPVTPPLASPPPQADQGRPPRSSTSSRRHSPTTSGEILMPGLPPPRMPRITRGLTDPGSPCDNRRFEGAVTGVSSESRRKEDLLEKGGEGVCRAEARDQEGKPEVARGRPGLLAGSKSKSLSPKGGWEGIGQRHRSRSASPKRV 301
            VDREGDFVLTPVGSDGNNYAG LDTSAGTDALDDAGSDNSGASVEEGGVSAEAVAANLRGGGRG+GEDHSTGQPKRA KLARGL NVARRLTKRSVGSSEAMS+GRDNSYLRAHDADFDG+G RS+TGGWSNSPTSPEHGER  KLPQDWHLPLTSTSPVTPP+ASPPPQADQGRPPRSST SRR SPT SGEILMPGLPPPRMP ITRGLTD GSPCD+RRFEG  TGV SESRRKEDLLEKGGEGVCRAEAR+QEGKPEVARGRPGLL GSKSKSLSPKGGWEGIG+RHRSRSASPKRV
Sbjct:  105 VDREGDFVLTPVGSDGNNYAGGLDTSAGTDALDDAGSDNSGASVEEGGVSAEAVAANLRGGGRGKGEDHSTGQPKRATKLARGLLNVARRLTKRSVGSSEAMSIGRDNSYLRAHDADFDGEGPRSFTGGWSNSPTSPEHGER--KLPQDWHLPLTSTSPVTPPMASPPPQADQGRPPRSSTGSRRPSPTRSGEILMPGLPPPRMPPITRGLTDLGSPCDHRRFEGTATGVGSESRRKEDLLEKGGEGVCRAEAREQEGKPEVARGRPGLLEGSKSKSLSPKGGWEGIGERHRSRSASPKRV 403          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9726.17829.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
CRAL-TRIO4.880e-23788.56domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized3.060e-19495.35protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.320e-18492.36protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9726contigEcto-sp9_F_contig9726:3..2487 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9726.17829.1mRNA_Ecto-sp9_F_contig9726.17829.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9726 3..2487 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9726.17829.1 ID=prot_Ecto-sp9_F_contig9726.17829.1|Name=mRNA_Ecto-sp9_F_contig9726.17829.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=434bp
VDREGDFVLTPVGSDGNNYAGDLDTSAGTDALDDAGSDNSGASVEEGGVS
AEAVAANLRGGGRGEGEDHSTGQPKRAIKLARGLSNVARRLTKRSVGSSE
AMSLGRDNSYLRAHDADFDGDGLRSYTGGWSNSPTSPEHGERHRKLPQDW
HLPLTSTSPVTPPLASPPPQADQGRPPRSSTSSRRHSPTTSGEILMPGLP
PPRMPRITRGLTDPGSPCDNRRFEGAVTGVSSESRRKEDLLEKGGEGVCR
AEARDQEGKPEVARGRPGLLAGSKSKSLSPKGGWEGIGQRHRSRSASPKR
VNPFNRKPVSPSGNGQDQDQTQGRGQDGQEGHTDQETSSFNPASPVTTSA
TPRSDEVTATQATSKAKLNAEKILHDKSRSDEVIKDHVKRGDSGHPPSVG
EGVPAAPVKVPPCVPAALPPELKYGDRLRLKAR*
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