prot_Ecto-sp9_F_contig9657.17760.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig9657.17760.1
Unique Name	prot_Ecto-sp9_F_contig9657.17760.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	312

Homology

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BLAST of mRNA_Ecto-sp9_F_contig9657.17760.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI9_ECTSI)

HSP 1 Score: 404 bits (1037), Expect = 3.390e-128
Identity = 255/272 (93.75%), Postives = 261/272 (95.96%), Query Frame = 0

Query:    1 AASVGDTSLSTIPRRSSMCQHAICAPRLGRKSLDGGVRYEDGVLLVPDCRKLRQEIVRSTCMDPAGSVRPDYVAYVGAPIYIDGAPLGTFCVFSRRTLKDLGWNAHHTVVLRGLADAAATEMVRLCRMAELEDRQEXXXXXXRRESPAPGFRSQTSAPAARTMTSRQANGGDAVSPSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERETITGVELSGSGDGSTSTGGGRFVPSRAPLDHRHGVLILDGLVRAA 272
            AASVGDTSLSTIPRR+SMCQHA+CAPRLGRKSLD GVRYEDGVLLVPDCRKLRQEIVRSTCMDPAGSVRPDYVAYVGAPIY+DGAPLGTFCVFSRRTLKDLGW AHHTVVLRGLADAAATEMVRLCRMAELEDRQE      RRESPAPGFRS TSAPAARTMTSRQANGGDAVSPSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ERET+TG ELSGSGDGSTSTGGGR+VPSRAPLDHRHGVL+LDGLVRAA
Sbjct:  869 AASVGDTSLSTIPRRASMCQHAVCAPRLGRKSLDAGVRYEDGVLLVPDCRKLRQEIVRSTCMDPAGSVRPDYVAYVGAPIYVDGAPLGTFCVFSRRTLKDLGWTAHHTVVLRGLADAAATEMVRLCRMAELEDRQEQQRHRRRRESPAPGFRSHTSAPAARTMTSRQANGGDAVSPSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERETVTGGELSGSGDGSTSTGGGRYVPSRAPLDHRHGVLLLDGLVRAA 1140

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9657.17760.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ0_9PHAE)

HSP 1 Score: 351 bits (901), Expect = 3.160e-108
Identity = 234/271 (86.35%), Postives = 242/271 (89.30%), Query Frame = 0

Query:    1 AASVGDTSLSTIPRRSSMCQHAICAPRLGRKSLDGGVRYEDGVLLVPDCRKLRQEIVRSTCMDPAGSVRPDYVAYVGAPIYIDGAPLGTFCVFSRRTLKDLGWNAHHTVVLRGLADAAATEMVRLCRMAELEDRQEXXXXXXRRESPAPGFRSQTSAPAARTMTSRQANGGDAVSPSRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERETITGVELSGSGDGSTSTGGGRFVPSRAPLDHRHGVLILDGLVRA 271
            A SVGDTSLSTIPRR+SMCQHA+CAPRLGRKSLDGGVRYEDGVLLVPDCRKLRQEIVRSTCMDPAGSVRPDYVAYVGAPIY+DGAPLGTFCVFSRRTL+DLGW AHHT+VLRGLADAAATE+VRLCRMAELEDRQE      R ESP  GFR QTSAPAAR MTSRQ NGGDAVSPSR G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       G ELSGSGDGST+ GGGRF PS  PLDHR GVL+LDGLVRA
Sbjct:  897 ATSVGDTSLSTIPRRASMCQHAVCAPRLGRKSLDGGVRYEDGVLLVPDCRKLRQEIVRSTCMDPAGSVRPDYVAYVGAPIYVDGAPLGTFCVFSRRTLRDLGWTAHHTIVLRGLADAAATEIVRLCRMAELEDRQEQPRHRRRWESPPRGFRCQTSAPAARAMTSRQGNGGDAVSPSRAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----XXGGELSGSGDGSTTIGGGRFFPS-PPLDHRLGVLLLDGLVRA 1161

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig9657.17760.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig9657.17760.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Uncharacterized	3.390e-128	93.75	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Uncharacterized	3.160e-108	86.35	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SUPERFAMILY	55781	GAF domain-like	coord: 41..134

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig9657	contig	Ecto-sp9_F_contig9657:393..3748 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig9657.17760.1	mRNA_Ecto-sp9_F_contig9657.17760.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig9657 393..3749 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig9657.17760.1 ID=prot_Ecto-sp9_F_contig9657.17760.1|Name=mRNA_Ecto-sp9_F_contig9657.17760.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=312bp
AASVGDTSLSTIPRRSSMCQHAICAPRLGRKSLDGGVRYEDGVLLVPDCR
KLRQEIVRSTCMDPAGSVRPDYVAYVGAPIYIDGAPLGTFCVFSRRTLKD
LGWNAHHTVVLRGLADAAATEMVRLCRMAELEDRQERQRHRRRRESPAPG
FRSQTSAPAARTMTSRQANGGDAVSPSRGGGSSRVSSRSAPPPDAAAELL
RGGEKSSLTEGSDPPPAAAAAASSERETITGVELSGSGDGSTSTGGGRFV
PSRAPLDHRHGVLILDGLVRAASSSPPRGGGARRSMSEEVVVGGGSSGTF
RPPPVLARRHSG