prot_Ecto-sp9_F_contig9563.17682.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9563.17682.1
Unique Nameprot_Ecto-sp9_F_contig9563.17682.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length109
Homology
BLAST of mRNA_Ecto-sp9_F_contig9563.17682.1 vs.
Match: Coatomer_WDAD (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K868_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 9.580e-68
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
Query:    1 MPRACFVTTTCQGRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 109
            MPRACFVTTTCQGRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV
Sbjct:    1 MPRACFVTTTCQGRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 109          
BLAST of mRNA_Ecto-sp9_F_contig9563.17682.1 vs.
Match: Vesicle (coat complex COPI, beta sub-unit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNJ0_ECTSI)

HSP 1 Score: 195 bits (496), Expect = 1.720e-59
Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 0
Query:   12 QGRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQ 108
            +GRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQ
Sbjct:  165 KGRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQ 261          
BLAST of mRNA_Ecto-sp9_F_contig9563.17682.1 vs.
Match: Coatomer (WD associated region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRX4_9STRA)

HSP 1 Score: 172 bits (437), Expect = 9.080e-48
Identity = 83/106 (78.30%), Postives = 93/106 (87.74%), Query Frame = 0
Query:    4 ACFVTTTCQGRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 109
            ACF+ T+  GRLSYY+GGE MTLCHL+HPMYMLGYLPKEDRVYLMDK + IYSY+V Q+ LQYQTAVVRKDFE AN++LPSIP  EYTAVARFLESQGFK+EA  V
Sbjct:  536 ACFLYTSDAGRLSYYVGGEVMTLCHLDHPMYMLGYLPKEDRVYLMDKAKGIYSYKVLQSYLQYQTAVVRKDFEAANALLPSIPASEYTAVARFLESQGFKEEALAV 641          
BLAST of mRNA_Ecto-sp9_F_contig9563.17682.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJI1_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.860e-40
Identity = 70/105 (66.67%), Postives = 86/105 (81.90%), Query Frame = 0
Query:    5 CFVTTTCQGRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 109
            CF+ T   G+L+Y +GGE MTLCHL HPMY+LGY+PKEDR +L+DK  N++SY++  +ML YQ+AVVR+DF TANS+LP IPK EY AVARFLESQGFK EA QV
Sbjct:  541 CFLYTNSAGKLNYLVGGEVMTLCHLSHPMYLLGYVPKEDRAFLVDKTYNVHSYKLLLSMLSYQSAVVRQDFVTANSLLPLIPKSEYPAVARFLESQGFKQEALQV 645          
BLAST of mRNA_Ecto-sp9_F_contig9563.17682.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXQ5_9STRA)

HSP 1 Score: 151 bits (381), Expect = 3.240e-40
Identity = 71/105 (67.62%), Postives = 88/105 (83.81%), Query Frame = 0
Query:    5 CFVTTTCQGRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 109
            CF+ TT   RL+YY+GG+ MTL HL+HPMY+LGYLPKEDRVYL+DKQ N  S++V Q++L+YQTAVVRKDF+ AN++LPSIP  E++ VARFLESQGFK EA  V
Sbjct:  535 CFLYTTAGNRLNYYVGGKVMTLMHLDHPMYLLGYLPKEDRVYLVDKQTNFISFKVLQSVLEYQTAVVRKDFDAANALLPSIPVSEHSDVARFLESQGFKQEAMAV 639          
BLAST of mRNA_Ecto-sp9_F_contig9563.17682.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G0J9_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.780e-38
Identity = 67/105 (63.81%), Postives = 84/105 (80.00%), Query Frame = 0
Query:    5 CFVTTTCQGRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 109
            CF+ T    RL+Y++GGETMTLCHL+  MYMLGYLPKEDRV+L+DK  N+ SY+V  ++L++QTAVVR D E AN ILPSIP+ E+ +VARFLESQG K+EA  V
Sbjct:   12 CFLYTNNSNRLNYFVGGETMTLCHLDQEMYMLGYLPKEDRVFLIDKALNVVSYKVLLSVLEFQTAVVRDDIEAANEILPSIPESEHNSVARFLESQGLKEEALGV 116          
BLAST of mRNA_Ecto-sp9_F_contig9563.17682.1 vs.
Match: Coatomer (subunit beta' n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZMY1_9STRA)

HSP 1 Score: 145 bits (367), Expect = 2.460e-38
Identity = 68/109 (62.39%), Postives = 90/109 (82.57%), Query Frame = 0
Query:    5 CFVTTTCQGRLSYYIGGETMTLCHLEH----PMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 109
            CF+ +   GRL+Y++GG TMTLCHL+     P++MLG+LPKEDRVYLMD+ +N++SYR   A+LQYQTAVVR DFE AN+ILP+IP+ E+++VARFLE+QG+KD A QV
Sbjct:  535 CFIFSNIAGRLNYFVGGNTMTLCHLDQQSTGPLFMLGFLPKEDRVYLMDRSRNVFSYRALLAVLQYQTAVVRHDFEAANTILPAIPESEHSSVARFLEAQGYKDVALQV 643          
BLAST of mRNA_Ecto-sp9_F_contig9563.17682.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIQ5_PYTOL)

HSP 1 Score: 143 bits (361), Expect = 1.610e-37
Identity = 68/102 (66.67%), Postives = 83/102 (81.37%), Query Frame = 0
Query:    5 CFVTTTCQGRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEA 106
            CF+ T   GRL+YY+GGE MTL HLE  +YMLGYLP+E+ V+LMDK +N+YSY V   ML+YQTAVVR+DFETAN+ILP IP+ +   VARFLESQGFK+EA
Sbjct:  537 CFLYTNAGGRLNYYVGGEVMTLAHLEQKLYMLGYLPRENLVFLMDKMKNVYSYTVSLVMLEYQTAVVRRDFETANAILPKIPQDQMDYVARFLESQGFKEEA 638          
BLAST of mRNA_Ecto-sp9_F_contig9563.17682.1 vs.
Match: Coatomer_WDAD (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WFB2_GLOUD)

HSP 1 Score: 142 bits (359), Expect = 3.000e-37
Identity = 68/102 (66.67%), Postives = 82/102 (80.39%), Query Frame = 0
Query:    5 CFVTTTCQGRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEA 106
            CF+ T   GRL+YY+GGE MTL HLE  MYMLGYLP+E+ V+LMDK +N+YSY V   ML+YQTA+VR+DFETAN+ILP IP  +   VARFLESQGFK+EA
Sbjct:  538 CFLYTNAGGRLNYYVGGEVMTLAHLEMKMYMLGYLPRENLVFLMDKMKNVYSYMVSLVMLEYQTAIVRRDFETANAILPKIPHDQMDYVARFLESQGFKEEA 639          
BLAST of mRNA_Ecto-sp9_F_contig9563.17682.1 vs.
Match: Coatomer (subunit beta' n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKY2_AURAN)

HSP 1 Score: 142 bits (358), Expect = 4.040e-37
Identity = 65/109 (59.63%), Postives = 91/109 (83.49%), Query Frame = 0
Query:    5 CFVTTTCQGRLSYYIGGETMTLCHLEH----PMYMLGYLPKEDRVYLMDKQQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQGFKDEAFQV 109
            CF+ +   GRL+Y++GG TMTLCHL+     P++M+GYLP+ED+VYLMD+ +N++ YR   A+LQYQTAVVR+DFETAN+ILP+IP+ E+++VARFLE+QG+KD A +V
Sbjct:  535 CFIFSNGAGRLNYFVGGNTMTLCHLDQQSTGPLFMIGYLPREDKVYLMDRSRNVFCYRALLAVLQYQTAVVRQDFETANTILPAIPETEHSSVARFLEAQGYKDVALEV 643          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9563.17682.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Coatomer_WDAD9.580e-68100.00domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Vesicle1.720e-5998.97coat complex COPI, beta sub-unit n=1 Tax=Ectocarpu... [more]
Coatomer9.080e-4878.30WD associated region-domain-containing protein n=1... [more]
Hypothetical1.860e-4066.67protein (Fragment) n=1 Tax=Spumella elongata TaxID... [more]
Hypothetical3.240e-4067.62protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Hypothetical1.780e-3863.81protein (Fragment) n=1 Tax=Florenciella parvula Ta... [more]
Coatomer2.460e-3862.39subunit beta' n=4 Tax=Pelagomonas calceolata TaxID... [more]
Uncharacterized1.610e-3766.67protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Coatomer_WDAD3.000e-3766.67domain-containing protein n=1 Tax=Globisporangium ... [more]
Coatomer4.040e-3759.63subunit beta' n=1 Tax=Aureococcus anophagefferens ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.470coord: 61..109
e-value: 1.1E-13
score: 53.2
NoneNo IPR availablePANTHERPTHR19876:SF21coord: 5..108
NoneNo IPR availablePANTHERPTHR19876COATOMERcoord: 5..108
IPR006692Coatomer, WD associated regionPFAMPF04053Coatomer_WDADcoord: 5..109
e-value: 1.2E-30
score: 107.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9563contigEcto-sp9_F_contig9563:3634..4347 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9563.17682.1mRNA_Ecto-sp9_F_contig9563.17682.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9563 3634..4347 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9563.17682.1 ID=prot_Ecto-sp9_F_contig9563.17682.1|Name=mRNA_Ecto-sp9_F_contig9563.17682.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=109bp
MPRACFVTTTCQGRLSYYIGGETMTLCHLEHPMYMLGYLPKEDRVYLMDK
QQNIYSYRVRQAMLQYQTAVVRKDFETANSILPSIPKGEYTAVARFLESQ
GFKDEAFQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006692Coatomer_WD-assoc_reg