mRNA_Ecto-sp9_F_contig955.17672.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig955.17672.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL58_ECTSI) HSP 1 Score: 895 bits (2313), Expect = 1.090e-302 Identity = 450/693 (64.94%), Postives = 531/693 (76.62%), Query Frame = 3
Query: 147 METRAPYGGGGAQAGGPADPTAME-------------------RLKEVEQLLADKKPWPAFLHSGLA-----NDCPDIAKDALAWMASQAVGFLNLASVGPLTPVCEAFKDLIEAVEGAAEADEKLRELITWCAFLTEVLLKHGKEENALAPVMNQLTAFVSTTNQLTKRAKTLAARGKCAALLCFRRDGKQVQDFDAKLRKIWEDIQGLAVLELGTLIRRTLAPKTGEMAEIPPKALELPPAFVERGELVGAVVQDLVSAERATDTAHVLRGIPGGGKTVAASAVVRCEDVRRTFKDGILWVRVGQVGTGNPIALLQGLAEDLAHAPSNRPHTVPHKFRDVEHVISHLVGVREQGNLRCLVVLDDVWDSQMVPLVLRTGFHCLVTTRDLAVVPRDKRGTCTQVDELTETEALELLKKASRATLNIPTDEGLKVANACGFLPLALAIIGAMGGSRVDPHSRETWRGVHTKLVEEPTRVQDHVGGALAVSFRELNENARTRFRKLGVLVRGVRAPVDMVAHLWEQDPSDTALFLSDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLRGNMQLVTSRQAQYLGAISVLESYARAGEVLPGFYSLIALWQSLEDLSGDKQLEVSTYGVNLKALEGSEPTEHLAYINWAAGRLFELQGKYAEAEALYQRCQTIDEKALGPEHPWVATALNNRAGLL 2153
M RAP GG QAGG A+P E L+EVE+LLA +KPWPAF+ +GL N+CP+ +AL WMAS VG L++ASVGPLTPVC+AF LIEA EGA E + L EL++WC+FL V ++HGK+E+ L P+ + FV+TT +L KRAK + ARGKC ALLC RRDGKQVQDFD KLR IW+DIQG+ +L + R TL PKT MA +P A +LPPAFVER +L AVV+DLV+ +RAT+ AHVLRG+PGGGKT+AA AVVRCEDVRR+FKDGI WV+VGQVGTGNP+ALLQGLA DLAHAPS++PHTVPH+F DVEH +SHL GVR++ NLRCLVVLDDVWD+Q+VPL L GFH LVTTRDLAV+PRD +G CT+V+ LT EALELLK ASRAT IPT+EGLKVA CGFLPL LAI+GAMG SR DP S ETWRG+H L +EP VQD VG LAVSF L ARTRFRKLGVL +G RAPVDMVAHLWE D D+ L L DLVDKSLVKV E +YYLHDLVLDFAKDELRKL+ ++LVT RQAQYLG +SV++ YA+AGEV+ GFY+L+ALW+S+EDLSGD QLE STYG +K E SE +E +AY+ WA GRLFELQGK+AEAE LY RCQ I+E+ALGPEHP VAT L+ RAGL+
Sbjct: 1 MAARAPSSGGSVQAGGTAEPVTAEYSFGGLHCSWTTLGIGSGQMLQEVERLLASRKPWPAFVQAGLQARYEWNNCPEAVGEALEWMASATVGLLDMASVGPLTPVCKAFTSLIEAAEGAIEVAKNLEELVSWCSFLVGVFIEHGKQEDNLRPIAKPMKDFVATTIELAKRAKAMGARGKCTALLCHRRDGKQVQDFDVKLRHIWDDIQGVTLLAFYSDFRATLPPKTAYMARVPKNAKQLPPAFVERRDLFKAVVKDLVATDRATNAAHVLRGMPGGGKTIAAKAVVRCEDVRRSFKDGIFWVQVGQVGTGNPMALLQGLARDLAHAPSHQPHTVPHEFVDVEHAVSHLEGVRKERNLRCLVVLDDVWDAQIVPLFLCGGFHSLVTTRDLAVIPRDLQGVCTEVEMLTNAEALELLKNASRATAAIPTNEGLKVAKDCGFLPLPLAIVGAMGSSRADPDSAETWRGIHALLQQEPELVQDPVGSVLAVSFCGLKGAARTRFRKLGVLAKGARAPVDMVAHLWELDHDDSTLLLDDLVDKSLVKVEEHAYYLHDLVLDFAKDELRKLKERVRLVTCRQAQYLGRMSVVKDYAKAGEVMGGFYALMALWRSVEDLSGDNQLEASTYGATVKPSEESEASEDVAYLTWAVGRLFELQGKFAEAEELYDRCQAINEEALGPEHPSVATTLHGRAGLM 693
BLAST of mRNA_Ecto-sp9_F_contig955.17672.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L982_9PHAE) HSP 1 Score: 729 bits (1882), Expect = 9.970e-248 Identity = 365/476 (76.68%), Postives = 402/476 (84.45%), Query Frame = 3
Query: 219 RLKEVEQLLADKKPWPAFLHSGLANDCPDIAKDALAWMASQAVGFLNLASVGPLTPVCEAFKDLIEAVEGAAEADEKLRELITWCAFLTEVLLKHGKEENALAPVMNQLTAFVSTTNQLTKRAKTLAARGKCAALLCFRRDGKQVQDFDAKLRKIWEDIQGLAVLELGTLIRRTLAPKTGEMAEIPPKALELPPAFVERGELVGAVVQDLVSAERATDTAHVLRGIPGGGKTVAASAVVRCEDVRRTFKDGILWVRVGQVGTGNPIALLQGLAEDLAHAPSNRPHTVPHKFRDVEHVISHLVGVREQGNLRCLVVLDDVWDSQMVPLVLRTGFHCLVTTRDLAVVPRDKRGTCTQVDELTETEALELLKKASRATLNIPTDEGLKVANACGFLPLALAIIGAMGGSRVDPHSRETWRGVHTKLVEEPTRVQDHVGGALAVSFRELNENARTRFRKLGVLVRGVRAPVDMVAHLWEQ 1646
RL+EV++ L +K WPAFLH AN CP+ +ALAWMAS VG LN+ASVGPL P+CEAFK LI+A EGAAEADE LRELI WCAFLT+VLL+HGKE +ALAPVM L FVSTTNQL KRAK LA R KCAALLCF RDGKQ+QDFDAKLR IW DIQG+ +L + R PKTGEMA+IP A LPPAFVER LV AV QDL +AERATDTA VLRGIPGGGKTVAAS+VVRCE+VRR+FKDGI WV+VGQVGTGNP ALL+GLAEDLAHAPSNRP TVPH+FRDVEHV+SHLVGV EQGNLRCLVVLD+VWD +MVPL LRTGF CLVTTRD+A+VPR GTCT VD LTE EALELLKKASRAT +IP DEGL+VA+ CGFLPLA+AIIGAMG SRV+PHS ETWRGVH +LVEEP+ VQDHVGGALAVSFREL+E AR RFRKLGVL RGVRAPVDMVAHLWEQ
Sbjct: 8 RLEEVQRHLEGRKKWPAFLHGEWANGCPEDVGEALAWMASGVVGLLNVASVGPLMPICEAFKGLIQAAEGAAEADENLRELIAWCAFLTDVLLQHGKEVDALAPVMKPLRDFVSTTNQLAKRAKRLATRRKCAALLCFARDGKQIQDFDAKLRSIWNDIQGVTILWVSAEFRAARPPKTGEMAKIPHNAPALPPAFVERSGLVEAVAQDLAAAERATDTADVLRGIPGGGKTVAASSVVRCENVRRSFKDGIFWVQVGQVGTGNPTALLKGLAEDLAHAPSNRPRTVPHEFRDVEHVVSHLVGVLEQGNLRCLVVLDNVWDREMVPLFLRTGFRCLVTTRDVAMVPRHLWGTCTPVDMLTEAEALELLKKASRATSSIPRDEGLEVADDCGFLPLAIAIIGAMGSSRVNPHSPETWRGVHARLVEEPSLVQDHVGGALAVSFRELSEKARARFRKLGVLARGVRAPVDMVAHLWEQ 483
BLAST of mRNA_Ecto-sp9_F_contig955.17672.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 467 bits (1201), Expect = 1.060e-137 Identity = 314/737 (42.61%), Postives = 409/737 (55.50%), Query Frame = 3
Query: 72 ATRPLCQAATLLL-GSEDIVCLPAETMET----------------RAPYGGG--GAQAGGPADPTAMERLKEVEQLLADKKPWPAFLHSGLA-----NDCPDIAKDALAWMASQAVGFLNLASVGPLTPVCEAFKDLIEAVEGAAEADEKLRELITWCAFLTEVLLKHGKEENALAPVMNQLTAFVSTTNQLTKRAKTLAARGKCAALLCFRRDGKQVQDFDAKLRKIWEDIQGLAVLE----LGTLIRRTLAPKTGEMAEIPPKALELPPA-FVERGELVGAVVQDLVSAERATDTAHVLRGIPGGGKTVAASAVVRCEDVRRTFKDGILWVRVGQVGTGNPIALLQGLAEDLAHAPSNRPHTVPHKFRDVEHVISHLVGVREQGNLRCLVVLDDVWDSQMVPLVLRTGFHCLVTTRDLAVVPRDKRGTCTQVDELTETEALELLKKASRATLNIPTDEG----LKVANACGFLPLALAIIGAMGGSRVDPHSRETWRGVHTKL--VEEPTRVQDHVGGALAV----SFRELNENARTRFRKLGVLVRGVRAPVDMVAHLWE-QDPSDTALFLSDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLRGNMQLVTSRQAQYLGAISVLESYA--RAGEVLPGFYSLIALWQSLEDLSGDKQLEVSTYGVNLKALEGSEPTEHLAYINWAAGRLFELQGKYAEAEALYQRCQTIDEKALGPEHPWVATALNNRAGLL 2153
+TR L Q + LLL G+ DI+ + MET RAP GG G A +PT +ERL V +LLA+KKPWPAFLH G CP ++ALAWM + AVG L +ASVGPL PVCEAFK LIEA EGAAE +KL+ L++ CAFL VL++HG+ LA V + FV TTN+L A A GKC A C R D + F+ LR+I DI + LE + L P +MA +P ALELP + +VER V V L + E + + + G+ GGGK+V ASA VR VR F+ GI WVRVG+ + +ALLQGLA D+ AP++ PH VPH +E V HL V G LVVLDDVW+ ++V + GF L+TTRD +VV ++ ++TE EALELL+K S T+ P D+ KV CG LPL LAI G+M R + W + +L V + R + ++ V SF L + F K+ VL G AP++M+ +LWE +D T LV K L+ V Y +HDLVL+FAK +R ++ T+ QAQYLG + VLE Y G G + L ALW+S+E LSGD +LEV++Y +L LE E T+ +A W+ G LF +QGKYAEAE LY+R I EK LGPEHP VAT+L+NRA LL
Sbjct: 5 STRHLQQPSFLLLTGATDIM----QGMETLAQTAGVRDGIGGEMQRAPASGGQAGLAAAAVVEPTTVERLDHVGKLLAEKKPWPAFLHIGARATEEWEACPTPVQEALAWMTTSAVGVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVVTTNELAGFAARWAKGGKCRAFCCHRPDLSALAGFEECLRRIGSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERAA-VQEVADGLTTPEESR-APYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRL--ELGDMTEEEALELLRKTS-GTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEVEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCEATKAVARSYWSVGFLFNIQGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLL 732
BLAST of mRNA_Ecto-sp9_F_contig955.17672.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 456 bits (1172), Expect = 1.120e-131 Identity = 296/689 (42.96%), Postives = 390/689 (56.60%), Query Frame = 3
Query: 156 RAPYGG--GGAQAGGPADPTAMERLKEVEQLLADKKPWPAFLHSGLA-----NDCPDIAKDALAWMASQAVGFLNLASVGPLTPVCEAFKDLIEAVEGAAEADEKLRELITWCAFLTEVLLKHGKEENALAPVMNQLTAFVSTTNQLTKRAKTLAARGKCAALLCFRRDGKQVQDFDAKLRKIWEDIQGLAVLE----LGTLIRRTLAPKTGEMAEIPPKALELPPA-FVERGELVGAVVQDLVSAERATDTAHVLRGIPGGGKTVAASAVVRCEDVRRTFKDGILWVRVGQVGTGNPIALLQGLAEDLAHAPSNRPHTVPHKFRDVEHVISHLVGVREQGNLRCLVVLDDVWDSQMVPLVLRTGFHCLVTTRDLAVV--PRDKRGTCTQVDELTETEALELLKKASRATLNIPTDEG----LKVANACGFLPLALAIIGAMGGSRVDPHSRETWRGVHTKL--VEEPTRVQDHVGGALAV----SFRELNENARTRFRKLGVLVRGVRAPVDMVAHLWE-QDPSDTALFLSDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLRGNMQLVTSRQAQYLGAISVLESYA--RAGEVLPGFYSLIALWQSLEDLSGDKQLEVSTYGVNLKALEGSEPTEHLAYINWAAGRLFELQGKYAEAEALYQRCQTIDEKALGPEHPWVATALNN 2138
RAP G G A +PT +ERL V +LLA+KKPWPAFLH G CP ++ALAWM + AVG L +ASVGPL PVCEAFK LIEA EGAAE +KL+ L++ CAFL VL++HG+ LA V + FV+TTN+L A A GKC A C R D + F+ LR+I DI + LE + L P +MA +P ALELP + +VER + V D ++A + + + G+ GGGK+V ASAVVR VR F+ GI WVRVG+ + +ALLQGLA D+ AP++ P VP +E V HL V G + LVVLDDVW+ ++V + GF L+TTRD +VV P + ++ ++TE EALELL+K S A + P D+ KV CG LPL LAI G+M R + W + +L V + R + ++ V SF L + F K+ VL G AP++M+ +LWE +D T LV K L+ V Y +HDLVL+FAK +R ++ T+ QAQYLG + VLESY G G + L ALW+S+E LSGD LEV++Y +L+ LE E TE +A + G LF +Q KYAEAE LY+R + I EK LGPEHP VAT+LNN
Sbjct: 29 RAPASGDQAGLAAAAVVEPTTVERLDHVGKLLAEKKPWPAFLHIGARATEEWEACPTPVQEALAWMTTSAVGVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVATTNELAGFAARWAKGGKCRAFFCHRPDLSALAGFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERAAV--QEVADGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRL----ELGDVTEEEALELLRKTSGA-VGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEIEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLESYGDPEHGTGDQGLFFLDALWRSVEKLSGDPGLEVASYRASLEELESCEATEAVATSYGSVGFLFNIQSKYAEAEPLYERSRAIQEKVLGPEHPHVATSLNN 710
BLAST of mRNA_Ecto-sp9_F_contig955.17672.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 424 bits (1090), Expect = 2.230e-128 Identity = 287/702 (40.88%), Postives = 378/702 (53.85%), Query Frame = 3
Query: 213 MERLKEVEQLLADKKPWPAFLH-SGLAND----CPDIAKDALAWMASQAVGFLNLASVGPLTPVCEAFKDLIEAVEGAAEADEKLRELITWCAFLTEVLLKHGKEENALAPVMNQLTAFVSTTNQLTKRAKTLAARGKCAALLCFRRDGKQVQDFDAKLRKIWEDIQGLAVLE----LGTLIRRTLAPKTGEMAEIPPKALELP-PAFVERGELVGAVVQDLVSAERATDTAHVLRGIPGGGKTVAASAVVRCEDVRRTFKDGILWVRVGQVGTGNPIALLQGLAEDLAHAPSNRPHTVPHKFRDVEHVISHLVGVREQGNLRCLVVLDDVWDSQMVPLVLRTGFHCLVTTRD--LAVVPRDKRGTCTQVDELTETEALELLKKASRATLNIPTDEG----LKVANACGFLPLALAIIGAMGGSRVDPHSRETWRGVHTKLVEEPTRVQ------DHVGGALAVSFRELNENARTRFRKLGVLVRGVR-----------------------------APVDMVAHLWE-QDPSDTALFLSDLVDKSLVKVVEQS-YYLHDLVLDFAKDELRKLRGNMQLVTSRQAQYLGAISVLESYA--RAGEVLPGFYSLIALWQSLEDLSGDKQLEVSTYGVNLKALEGSEPTEHLAYINWAAGRLFELQGKYAEAEALYQRCQTIDEKALGPEHPWVATALNNRAGLL 2153
RL+ V +LLA+K+PWPAFLH A + CP +A++AL W+A+ VG L++ASVGPL PVCEAFK LIEA EGAAE+ KL+ L++ CAFL VL++HG+ LA V + FV TTN L A A GKC A C R D + DF+ LR+I DI + LE + L P +MA +P ALELP ++VER V V L S E + + G+ GGGK+V ASAVVR VR F+ GI WVRVG+ + +ALLQGLA ++ A ++ PHTVPH +E V HL V G LVVLDDVW+ ++V + GF L+TTRD + VVP + +V ++TE EALELL+K+S A + P D+ KV CG LPL LAI G+M + + W+ + L +++ + L SF L + F KL VL AP++M+ +LWE +D T LV K L+ V Y +HDLVL++AK +R ++ VT+ QA +LG + VL+SY G + L ALW+S+E LSGD +LEV ALE E TE +A W+ G LF +QGKYAEAE LY+R Q I E LGPEHP V T+LNNRA LL
Sbjct: 13 QRRLERVGKLLAEKRPWPAFLHIEARATEEWEACPTVAQEALTWIATATVGVLDVASVGPLVPVCEAFKALIEAAEGAAESQHKLQSLVSQCAFLATVLIQHGRAVGPLAQVHKPIEDFVVTTNDLAGFAARWANGGKCRAFFCHRPDLSALADFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPCSSYVERAA-VQEVADGLTSPEDPR-APYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRL----EVGDMTEEEALELLRKSSGA-VGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSINAVLETSFDSLAVRKQEEFLKLAVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPIEMLRNLWEIEDAEGTRDEAEGLVSKCLLHAVGGGGYRVHDLVLEYAKTRIRADAEMVRKVTALQAHFLGRLDVLKSYRDPEHGAGNQSLFFLDALWRSVEKLSGDPELEV--------ALESCEATEAVARSYWSVGFLFNIQGKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLL 699
BLAST of mRNA_Ecto-sp9_F_contig955.17672.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI) HSP 1 Score: 449 bits (1155), Expect = 1.990e-127 Identity = 282/675 (41.78%), Postives = 386/675 (57.19%), Query Frame = 3
Query: 201 DPTAMERLKEVEQLLADKKPWPAFLHSGLA-----NDCPDIAKDALAWMASQAVGFLNLASVGPLTPVCEAFKDLIEAVEGAAEADEKLRELITWCAFLTEVLLKHGKEENALAPVMNQLTAFVSTTNQLTKRAKTLAARGKCAALLCFRRDGKQVQDFDAKLRKIWEDIQGLAVLELGTLIRRTLA----PKTGEMAEIPPKALELPPAFVERGELVGAVVQDLVSAERATDTAHVLRGIPGGGKTVAASAVVRCEDVRRTFKDGILWVRVGQVGTGNPIALLQGLAEDLAHAPSNRPHTVPHKFRDVEHVISHLVGV-REQGNLRCLVVLDDVWDSQMVPLVLRTGFHCLVTTRDLAVVPRDKRGTCTQVDELTETEALELLKKASRATLNIPTD----EGLKVANACGFLPLALAIIGAMGGSRVDPHSRETWRGVHTKL--VEEPTRVQDHVGGALAV----SFRELNENARTRFRKLGVLVRGVRAPVDMVAHLWE-QDPSDTALFLSDLVDKSLVKVV-EQSYYLHDLVLDFAKDELRKLRGNMQLVTSRQAQYLGAISVLESYA--RAGEVLPGFYSLIALWQSLEDLSGDKQLEVSTYGVNLKALEGSEPTEHLAYINWAAGRLFELQGKYAEAEALYQRCQTIDEKALGPEHPWVATALNNRAGLL 2153
+PT +ERL+ V +LLA+K+PWPAFLH G CP +A++AL WM + AVG L++ASVGPL PVC+A K LIEA EGAAE ++K++ L++ CAFL VL++HG+ ALA V + FV TTN+L A A GKC A C R D + F+ LR I DI + LE L L P+ +MA +P AL+LP +VER + V D ++A + + G+ GGGK+V ASAVVR VR F+ GI WVRVG+ + + LLQGLA ++ AP++ PH VP +E V HL V G LVVLDDVW+ ++V ++ GF L+TTRD +VV R + ++TE EALELL+K S T+ P D + KV CG LPL LAI G+M + + W + V + R + A+ V SF L + F ++ VL G AP++M+ +LWE +D T LV+K L+ V + Y +HD+VL+FAK +R ++ T+ QAQ+LG + VL+SY G G + L +LW+S+E LSGD +LEV+TY +L+ LE + TE +A A G LF+ Q KY EAE L++R Q + EK LGPEHP VA +LNNRA LL
Sbjct: 21 EPTTVERLEHVGKLLAEKRPWPAFLHIGARATEEWEACPTLAQEALTWMTTAAVGVLDVASVGPLVPVCQALKALIEAAEGAAECEDKVQSLVSQCAFLATVLIQHGRAVGALAQVHKPIQDFVVTTNELAGFAARWAKDGKCRAFFCHRPDLSALAGFEECLRGIRSDIALVDGLEQHQLFLAALPSLRPPRLLDMAAVPAGALDLPRGYVERAAV--QEVADGLTAPEEPRAPYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRL--DLGDMTEEEALELLRKTS-GTVGQPGDYVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKSFENVAKKMRARGQQSSAIKVVLETSFDSLAVQKQEEFLRMSVLAAGALAPIEMLRNLWEIEDAEGTRDEAEGLVNKCLLHAVGDGGYRVHDMVLEFAKTSIRADEETVEKATALQAQFLGRLDVLKSYRDPEHGAGDRGLFFLDSLWRSVEKLSGDPELEVTTYRASLRELESCKATEDMASSYSAVGFLFDAQRKYIEAEPLHERAQAMQEKVLGPEHPGVAQSLNNRADLL 690
BLAST of mRNA_Ecto-sp9_F_contig955.17672.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE) HSP 1 Score: 427 bits (1098), Expect = 3.470e-124 Identity = 276/674 (40.95%), Postives = 367/674 (54.45%), Query Frame = 3
Query: 216 ERLKEVEQLLADKKPWPAFLHSGLA-----NDCPDIAKDALAWMASQAVGFLNLASVGPLTPVCEAFKDLIEAVEGAAEADEKLRELITWCAFLTEVLLKHGKEENALAPVMNQLTAFVSTTNQLTKRAKTLAARGKCAALLCFRRDGKQVQDFDAKLRKIWEDIQGLAVLELGTLI-----RRTLAPKTGEMAEIPPKALELPPAFVERGELVGAVVQDLVSAERATDTAHVLRGIPGGGKTVAASAVVRCEDVRRTFKDGILWVRVGQVGTGNPIALLQGLAEDLAHAPSNRPHTVPHKFRDVEHVISHLVGVREQGNLRCLVVLDDVWDSQMVPLVLRTGFHCLVTTRDLAVVPRDKRGTCTQVDELTETEALELLKKASRATLNIPTDEGLKVANACGFLPLALAIIGAMGGSRVDPHSRETWRGVHTKLVEEPTRVQDHVGG------------------ALAVSFRELNENARTRFRKLGVLVRGVRAPVDMVAHLWEQDPSDTALFLSDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLRGNMQLVTSRQAQYLGAISVLESYARAGEVLPGFYSLIALWQSLEDLSGDKQLEVSTYGVNLKALEGSEPTEHLAYINWAAGRLFELQGKYAEAEALYQRCQTIDEKALGPEHPWVATALNNRAGLL 2153
+RL+EVE LLA+KKPWPAFL + + +DCP+ A DAL WMAS AVG L++ASVGPL PVC+AF LIEA +GA E E LREL+TWCAFL V ++HGK+ + L + L VSTT +L KRAK +A RGKC AL C ++D K + FDAKLR++W DI+GLA+L++ ++ R P G MA++P AL+LPP+ V+R L +V L ATD + GI W+RVG+VG AL + L A +P +F E +I +L + + L LVVLDDVW+ +V + TG LVTTR +VV RG T V + EA ELLK S A + +P E +VA ACG+ L LAI G++ + DP+S TWR +L E T+ ++ V G L +S L + F L VL RGV AP M+A +W++D V SL++ V+ S+ LHDL+LDF + K + RQ+QYLG ++VL+ Y G+ L GFYSLI LW+ L +L G KQLEV Y +L L G + + + A GRL EL+G +AEA+ R I EK LGPEHP +A LNNRA LL
Sbjct: 60 KRLEEVETLLANKKPWPAFLRAAVETRGEWDDCPEGATDALEWMASTAVGLLDIASVGPLIPVCKAFTALIEAAQGATEVVENLRELVTWCAFLVGVFIEHGKQVDNLQKIAKPLNELVSTTGELAKRAKVVAGRGKCTALFCHKKDAKTIASFDAKLRRLWTDIRGLAILDIQQIVIRLEERSRPVPVPG-MADVPAAALKLPPSHVKRVGLEAEIVNSLT----ATDAS------------------------------GISWLRVGRVGEDQLQALFEALTRGAFPAAK-----LPPRFNSPEEIIQYLTVLVAEDKLPRLVVLDDVWERAVVDTLRPTGLRLLVTTRLDSVVAM--RGGRTTVGNMDGGEARELLKSRSGA-IALPKTEADQVAAACGWHALTLAIAGSLRFVKDDPNSASTWR----RLASEMTQTKNSVRGPKMDADIGDDPTKKSLFPVLELSLESLGGDRERLFLSLLVLARGVSAPAPMLASIWDKDDMGARNEADFFVSNSLLQEVDSSFRLHDLLLDFVRTRCEKKI--IDEAVKRQSQYLGRLAVLQDYEAKGDSLEGFYSLIVLWRKLAELCG-KQLEVEVYHASLGKL-GDDVSTGASDAFSAVGRLHELEGNFAEADPFNLRAIEIGEKVLGPEHPDLAVWLNNRAELL 682
BLAST of mRNA_Ecto-sp9_F_contig955.17672.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI) HSP 1 Score: 400 bits (1029), Expect = 5.270e-113 Identity = 275/686 (40.09%), Postives = 358/686 (52.19%), Query Frame = 3
Query: 156 RAPYGGGGAQAGGPADPTAMERLKEVEQLLADKKPWPAFLHSGLA-----NDCPDIAKDALAWMASQAVGFLNLASVGPLTPVCEAFKDLIEAVEGAAEADEKLRELITWCAFLTEVLLKHGKEENALAPVMNQLTAFVSTTNQLTKRAKTLAARGKCAALLCFRRDGKQVQDFDAKLRKIWEDI---QGLAVLELGTLIRRTLAPKT-GEMAEIPPKALELPPAFVERGELVGAVVQDLVSAERATDTAHVLRGIPGGGKTVAASAVVRCEDVRRTFKDGILWVRVGQVGTGNPIALLQGLAEDLAHAPSNRPHTVPHKFRDVEHVISHLVGVREQGNLRCLVVLDDVWDSQMVPLVLRTGFHCLVTTRDLAVVPRDKRGTCTQVDELTETEALELLKKASRATLNIPTDEGLKVANACGFLPLALAIIGAMGGSRVDPHSRETWRGVHTKL---------VEEPTRVQDHVGGALAVSFRELNENARTRFRKL--GVLVRGVRAPVDMVAHLWEQDPSDTALFLSDLVDKSLVKVVEQSYYLHDLVLDFAKDELRKLRGNMQLVTSRQAQYLGAISVLESYARAGEVLPGFYSLIALWQSLEDLSGDKQLEVSTYGVNLKALEGSEPTEHLAYINWAAGRLFELQGKYAEAEALYQRCQTIDEKALGPEHPWVATALNNRAGLL 2153
RAP GG A +PTA ERL V +LLA+KKPWPAFLH G CP ++AL WMA VG L++ASVGPL PVC+AFK LIEA EGAAE+ +KL+ LI+ CAFLT VL++H + LA V + FV+TTN L A T A GKC AL C R D + DF+ LR I DI GL +L + R L P T MA +P + L + R L+G + L + D VL G+ G GK+V ASAVVR E VR F G+ WVR A L+G A +A T VE V +L V LVVLDDVW+ ++V + TG LVTTRD +VV G C +V ++ E EALE+L+ A+ N+ LP A A+ G P ++WR +H L + V V L VS + ++ + R L VL G AP DM+ LW++ P T F + LVD+S+++ ++ +HDLVL F K +L K N + TSR A+YLG + VL Y GE G Y+L+ALW+S+EDL G+ ++ + Y NL+ + P AGR+ EL GKYAEA+ LY R I E LGP+HP +AT LNNRAGLL
Sbjct: 3 RAPTSGGQAGLVAAVEPTAAERLDHVGKLLAEKKPWPAFLHIGARATEEWEACPTPVQEALVWMARATVGVLDIASVGPLEPVCQAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMKDFVATTNDLAAFAATWAKGGKCRALFCHRSDRSTLTDFEEGLRTISNDIALVDGLEHHQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTA-VGDAPCVLTGMAGAGKSVLASAVVRDEKVREHFHAGMFWVRARDA-KDQLHACLEGFALRVASTSG----TTSPGLGSVEEVTRYLKAVCADSVSPRLVVLDDVWEREIVDALKLTGLQLLVTTRDRSVVSMP--GECVEVGDMEEDEALEVLRVGCGASKNLE-------------LPRAEALQGP-------PQDPKSWRTLHEALSKAMSTRLGTDRIMAVPKRVDAVLEVSLGAMADDPAKQQRCLFLAVLAPGTLAPSDMLEDLWDEAPGATKTFAAQLVDQSMLQPAGDAFRVHDLVLLFLKPKL-KADPNRPIATSRFAEYLGQLKVLRRYLGDGETSDGVYALMALWRSVEDLVGESRV-AAVYMNNLQGVPEHAPWRQ-------AGRVLELMGKYAEADPLYLRAIEIGENTLGPDHPALATQLNNRAGLL 651
BLAST of mRNA_Ecto-sp9_F_contig955.17672.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6Q8_9PHAE) HSP 1 Score: 365 bits (936), Expect = 8.870e-107 Identity = 265/697 (38.02%), Postives = 355/697 (50.93%), Query Frame = 3
Query: 147 METRAPYGGGGAQAGGPADPTAMERLKEVEQLLADKKPWPAFLHSGLA-----NDCPDIAKDALAWMASQAVGFLNLASVGPLTPVCEAFKDLIEAVEGAAEADEKLRELITWCAFLTEVLLKHGKEENALAPVMNQLTAFVSTTNQLTKRAKTLAARGKCAALLCFRRDGKQVQDFDAKLRKIWEDIQGLAVLELGTLIRRTLAPKTGEMAEIPPKALELPPAFVERGELVGAVVQDLVSAERATDTAHVLRGIPGGGKTVAASAVVRCEDVRRTFKDGILWVRVGQVGTGNPIALLQGLAEDLAHAPSNRPHTVPHKFRDVEHVISHLVGVREQGNLRCLVVLDDVWDSQMVPLVLRTGFHCLVTTRDLAVVPRDKRGTCTQVDELTETEALELLKKASRATLNIPTDEGLKVANACGFLPLALAIIGAMGGSRVDPHSRETWRGVHTKLVEEPTRVQDHVGGALAVSFRELNENARTRFRKLGVLVRGVRAPVDMVAHLWEQD-----PSDTALFLSD----------LVDKSLVKVVEQSYYLHDLVLDFAKDELRKLRGNMQLVTSRQAQYLGAISVLESYARAGEVLPGFYSLIALWQSLEDLSGDKQLEVSTYGVNLKALEGSEPTEHLAYINWAAGRLFEL--------QGKYAEAEALYQRCQTIDEKALGPEHPWVATALNNRAGLL 2153
M RAP QAG A PT ERL+EVE LLA KKPWPAFL +G+ ++CP+ A+DAL WMAS AVG L++ASVGPLTPVC+AF LIEA +GA E + LREL+TWCAFL VL++HGK+ L V L FV+TT +L KRA +A RGK + R+ +MA++P AL+LPP+ V+R L +++ L + + A+ +VL G+ G GK++ AS+VVR E+VR+ F+ G W+RVG G AL LA + A +P +F +E +I HL V + L L+VLDDV + +V + TG LVTTR ++V RG T V + EA ELLK S A + +P E + G P A IG + PT+ + + L +S + L + F L VL RGV AP M+A +W+ T+L D V SL++ V+ S+ +HDL+LDFA+ K + RQ+QYL ++VL+ Y G+ L G YSLI LW+ L + G++Q+EV Y +L L G + + A A GRL L QGK EA LY R I E ALGPEH VATALNNRA LL
Sbjct: 1 MAARAPSDVSSVQAGAAAAPTTPERLEEVETLLAYKKPWPAFLCAGVDVHGEWDNCPEGARDALEWMASTAVGLLDIASVGPLTPVCKAFTALIEAAQGAMEVVKNLRELVTWCAFLVGVLIEHGKQVENLKAVNKPLNEFVATTGELAKRANVVAGRGK--------------------------------------MEERSRPLPLPDMADVPAAALKLPPSHVKRVGLEAEILKSLTTTD-ASGAPYVLLGVGGAGKSLLASSVVRTEEVRKHFRAGAFWLRVGPGGEDQLFALCDILARKVTPATK-----LPQQFNSLEDIIQHLTVVVAEDRLPRLMVLDDVLERAVVDTLRPTGLRLLVTTRLDSLVA--VRGGRTVVGNMDRAEARELLKSKSGA-IELPETEADQTKTILG--PQMDADIG-----------------------DNPTK--ESLFHVLDLSLKYLGRHQHRLFLSLVVLARGVSAPAPMLASIWDMVGLCVIKCATSLEKVDNMGARNEADFFVSNSLLQEVDGSFRVHDLLLDFARTRCEK--EILDEAVKRQSQYLRRLAVLQDYRAKGDPLEGLYSLIVLWRKLAEHCGNEQVEVEAYHASLGEL-GDDESAGAADAFSAVGRLLGLETHLYVSFQGKLDEAGPLYDRAIRIWEAALGPEHSQVATALNNRARLL 620
BLAST of mRNA_Ecto-sp9_F_contig955.17672.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK53_9PHAE) HSP 1 Score: 329 bits (844), Expect = 1.770e-97 Identity = 194/419 (46.30%), Postives = 260/419 (62.05%), Query Frame = 3
Query: 147 METRAPYGGGGAQAGGPADPTAMERLKEVEQLLADKKPWPAFLHSGLA-----NDCPDIAKDALAWMASQAVGFLNLASVGPLTPVCEAFKDLIEAVEGAAEADEKLRELITWCAFLTEVLLKHGKEENALAPVMNQLTAFVSTTNQLTKRAKTLAARGKCAALLCFRRDGKQVQDFDAKLRKIWEDIQGLAVLELGTLI----RRTLAPKTGEMAEIPPKALELPPAFVERGELVGAVVQDLVSAERATDTAHVLRGIPGGGKTVAASAVVRCEDVRRTFKDGILWVRVGQVGTGNPIALLQGLAEDLAHAPSNRPHTVPHKFRDVEHVISHLVGVREQGNLRCLVVLDDVWDSQMVPLVLRTGFHCLVTTRDLAVVPRDKRGTCTQVDELTETEALELLKKASRATLNIPTDEGLKV 1376
M RAP G QAG A PT ERL+EVE LLA KKPWPAFL +G+ ++CP+ A+DAL WMAS AVG L++ASVGPLTPVC+AF LIEA +GA E E LREL+TWCAFL VL++HGK+ + L V L FV+TT +L KRA +A R KC A LC ++D K + FD KLR+ W DIQGLAVL++ ++ R+ +MA++P AL+LPP+ V+R L +++ L + + A+ +VL G+ G GK++ AS+VVR E+VR+ F+ G W+RVG G AL +GLA LA + +P +F +E +I HL + + L LVVLDDVW+ +V ++ TG LVTTR +VV RG T V + EA ELLK S A + +P E +V
Sbjct: 1 MAARAPSSGSSVQAGAAAAPTTPERLEEVETLLAYKKPWPAFLCAGVDVHGEWDNCPEGARDALEWMASTAVGLLDVASVGPLTPVCQAFTALIEAAQGAMEVVENLRELVTWCAFLVGVLIEHGKQVDNLKAVNKPLNEFVATTGELAKRANVVAGRSKCMAFLCHKKDAKMMASFDDKLRRFWTDIQGLAVLDIQEIVTRMEERSRPLPLPDMADVPAAALKLPPSHVKRVGLEAEILKSLTATD-ASGAPYVLLGMGGAGKSLLASSVVRTEEVRKHFRAGAFWLRVGPGGEDQLQALFEGLAR-LAIPEAK----LPQRFNSLEEIIQHLTVLVAEDKLPRLVVLDDVWERAVVDILRPTGLRLLVTTRLDSVVA--VRGGRTVVGNMATGEARELLKSKSGA-ITLPETEADQV 410 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig955.17672.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig955.17672.1 >prot_Ecto-sp9_F_contig955.17672.1 ID=prot_Ecto-sp9_F_contig955.17672.1|Name=mRNA_Ecto-sp9_F_contig955.17672.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=1014bp METRAPYGGGGAQAGGPADPTAMERLKEVEQLLADKKPWPAFLHSGLANDback to top mRNA from alignment at Ecto-sp9_F_contig955:16081..23613- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig955.17672.1 ID=mRNA_Ecto-sp9_F_contig955.17672.1|Name=mRNA_Ecto-sp9_F_contig955.17672.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=7533bp|location=Sequence derived from alignment at Ecto-sp9_F_contig955:16081..23613- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig955:16081..23613- >mRNA_Ecto-sp9_F_contig955.17672.1 ID=mRNA_Ecto-sp9_F_contig955.17672.1|Name=mRNA_Ecto-sp9_F_contig955.17672.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=6084bp|location=Sequence derived from alignment at Ecto-sp9_F_contig955:16081..23613- (Ectocarpus species9 EcSCA_722f female)back to top |