mRNA_Ecto-sp9_F_contig953.17660.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig953.17660.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLW4_ECTSI) HSP 1 Score: 826 bits (2134), Expect = 3.290e-291 Identity = 472/516 (91.47%), Postives = 480/516 (93.02%), Query Frame = 1
Query: 1 MRRVLNTTALLCLLACAAAHTXXXXXXXXDHEXXTDESSHSEGEGHFEAAAVYDVEAGTNSLAAYPGGGSFEEETFAFMVVPAASADLDGLEAAEEDAEAAWDEYTSGAEDATVLASGESATPSADVVYQVTLEDPLVLVQVEVTAAGAYAVFLEHGSDEEGGDEXXXXXXXXXD-EIGTATAGKWGNALVASLVVSACSFAGIVVVASKHVANNVDLSHAFVFASGALLTAALLHIIPEALEGLEESYDSLHDLGLYAGLAVMGGISLGIVLHALLESGHSHSPGESXXXXXXXXEAXXXXXKAAADTGTSEATLPLSPVESNSDNLQALITARKGKSLLDVKGLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNGGMSLMQAFVYNFLSALSAVLGTVIILALQDTLSEKDIAIVLLVGAGSFIFIALCELLPGALAVAALVAKKGGGAIARSQVLKLGSFLLGAIVIGIPLLFDEHCGSGHDHDH 1545
MRRVLN TALLCLLACAAAHT DH + EGEGHFEAAAVYDVEAGTNSLAAYPGGGSFEEETFAFMVVPAASADLDGLE AEEDAEAAWDEYTSGAEDATVLASGESATPSADVVYQVTLEDPLVLV V+VTAAGAYAVFLEHGSDEEG XXXXXXXXX E GTATAGKWGNALVASLVVSACSFAGIVVVASKHVANN+DLSHAFVFASGALLTAALLHIIPEALEGLEESY SLHDLGLYAGLAVMGG+SLGIVLHALLESGHSHSPGESXXXXXX EA KA+A TGTSEATLP SPVESNSDNLQALI+ARKGKSLLDVKGLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNGGMSLMQAFVYNFLSALSAVLGTVIILALQDTLSEKDIAIVLLVGAGSFIFIALCELLPGALAVAALVAK+GGGAIARSQVLKLGSFLLGAIVIGIPLLFDEHCG+GHDHDH
Sbjct: 1 MRRVLNATALLCLLACAAAHTSHSDH---DHGSHSXXXXXXEGEGHFEAAAVYDVEAGTNSLAAYPGGGSFEEETFAFMVVPAASADLDGLEGAEEDAEAAWDEYTSGAEDATVLASGESATPSADVVYQVTLEDPLVLVPVDVTAAGAYAVFLEHGSDEEGXXXXXXXXXXXXXXETGTATAGKWGNALVASLVVSACSFAGIVVVASKHVANNIDLSHAFVFASGALLTAALLHIIPEALEGLEESYGSLHDLGLYAGLAVMGGMSLGIVLHALLESGHSHSPGESXXXXXXAVEAGGGGAKASAYTGTSEATLPPSPVESNSDNLQALISARKGKSLLDVKGLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNGGMSLMQAFVYNFLSALSAVLGTVIILALQDTLSEKDIAIVLLVGAGSFIFIALCELLPGALAVAALVAKRGGGAIARSQVLKLGSFLLGAIVIGIPLLFDEHCGTGHDHDH 513
BLAST of mRNA_Ecto-sp9_F_contig953.17660.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L662_9PHAE) HSP 1 Score: 572 bits (1474), Expect = 4.520e-191 Identity = 345/559 (61.72%), Postives = 401/559 (71.74%), Query Frame = 1
Query: 7 RVLNTTALLCLLACAAAHTXXXXXXXXDHEXXTDESSHSEGEGHFEAAAVYDVEAGTNSLAAYPGGGSFEEETFAFMVVPAASADLDGLEAAEEDAEAAWDEYTSGAEDATVLASGESATPSADVVYQVTLEDPLVLVQVEVTAAGAYAVFLEHGSDEEG-------------GDEXXXXXXXXXDEIGTATAGKWGNALVASLVVSACSFAGIVVVASKHVANNVDLSHAFVFASGALLTAALLHIIPEALEGLEESYDSLHDLGLYAGLAVMGGISLGIVLHALLESGHSHSPGE-----------------------SXXXXXXXXEAXXXXXKAAADTG---------TSEATLPLSPVESNSDNLQALITARKGKSLLDVKGLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNGGMSLMQAFVYNFLSALSAVLGTVIILALQDTLSEKDIAIVLLVGAGSFIFIALCELLPGALAVAALVAKKGGGAIARSQVLKLGSFLLGAIVIGIPLLFDEHCGSGHD-HDH 1545
R L+ A L LLAC A D ESSH+E +GHFE +AVYDVE GTNS A P G FE++T AFMVV AASAD +GL AEEDAEAAWD YTSGAEDATVLA GE ATPS VVYQV LEDPLVLVQVEVT AGAYAVFLEHG++E G XXXXXXXXX G+A+ +W N LVAS VVS CSFAG++VVA+K VA ++ LSHAF+FASGALLTAAL+HIIPEA+EGL+ SYD+LHDLGLYAGL V+GG+S+ +V+H L+ESGHSHSP E S K +A G ++ T P SP ES++DNL+ALI R G+SLLDVKGL+PVCWNV+ GDLVHNFADG+ IGAAFL+CS T+GWTV AS VLHE+PHE+ADFMALLNGGMSL QAF YNFLSALSAVLGT+IILAL DTLS+KD++IVLL+G+GSFIFIAL ELLP AL V V++KG A+ SQ+LKLGSFLLGAI+IGIPLL D+HC + H+ HDH
Sbjct: 2 RCLSAVAAL-LLACVAPEATSHSGHDYD------ESSHAE-DGHFEVSAVYDVEPGTNSFIAIPAEGRFEQDTLAFMVVLAASADTEGLAGAEEDAEAAWDAYTSGAEDATVLAPGEPATPSTVVVYQVALEDPLVLVQVEVTIAGAYAVFLEHGAEEVGIVLASPSGVVXXXXXXXXXXXXXXXXXSGSASGTQWVNGLVASFVVSVCSFAGLLVVANKRVAYSIGLSHAFIFASGALLTAALVHIIPEAMEGLDSSYDNLHDLGLYAGLTVLGGLSVSVVIHGLMESGHSHSPHEGHSHGGGTETVRPGGGHGHHARVSDGAGTTMPLGMAEGDKVSAWPGGNSPHAVQIQADVTQPPSPAESSTDNLRALIAERAGRSLLDVKGLQPVCWNVVIGDLVHNFADGLTIGAAFLTCSATVGWTVTASAVLHELPHEIADFMALLNGGMSLKQAFAYNFLSALSAVLGTIIILALGDTLSDKDVSIVLLLGSGSFIFIALSELLPEALVVTHAVSEKGAVAVMCSQLLKLGSFLLGAILIGIPLLVDQHCDAAHEGHDH 552
BLAST of mRNA_Ecto-sp9_F_contig953.17660.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN39_9PHAE) HSP 1 Score: 404 bits (1038), Expect = 7.520e-127 Identity = 254/496 (51.21%), Postives = 326/496 (65.73%), Query Frame = 1
Query: 130 EGHFEAAAVYDVE-AGTNSLAAYPGGGSFEEETFAFMVVPAASADLDGLEAAEEDAEAAWDEYTSGAEDATVLASGESATPSADVVYQVTLEDPLVLVQVEVTAAGAYAVFLEHGSDE------------------EGGDEXXXXXXXXXDEIG--TATAGKWGNALVASLVVSACSFAGIVVVASKHVANNVDLSHAFVFASGALLTAALLHIIPEALEGLEESYDSLHDLGLYAGLAVMGGISLGIVLHALLESGHSHSPGESXXXXXXXXEAXXXXXKAAADTGTSEATLPLSPVESNSDNLQALITARKGKSLLDVKGLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNGGMSLMQAFVYNFLSALSAVLGTVIILALQDTLSEKDIAIVLLVGAGSFIFIALCELLPGALAVAALVAKKGGGAIARSQVLKLGSFLLGAIVIGIPLLFDEHCGS--GHD-HDH 1545
+GHFEAAAVY +E AGT+S+ A PG E T AFM+VPAASAD +GLE AEEDAEAAWD + G EDATVLA GE+A P A VVYQ TL++ +V+V EVT AGAYA+ LEHG E EG +EXXXXXXXXX T + KW A+VA+ + SFAGI ++ SK +AN +DLSHA++FA+GA+LTAAL+HIIPE+ E E++ LHDLG++ G+ ++ GI+ I++ A+ +GHSH+ + A + G + T+P +NL L+ RKG++L D KGL+P+CWNVI GD VH+F G IGAAFLSC +TMGWT+ AS ++HEVP E+ADF+ALLNGGMS+ QA +N S + A+LG V+IL L D + IAI+LL+GAGSFIFI L ELLP AL+ + V KG G R KLGSF GA+VIGIPL+F HC + GH+ HDH
Sbjct: 37 DGHFEAAAVYSLEEAGTHSVIAVPG--EAFEGTLAFMLVPAASADDEGLEGAEEDAEAAWDAFMDGEEDATVLAFGETAIPDATVVYQTTLDESIVVVPAEVTDAGAYALLLEHGGGEVSTALVSPSGTAVAASVSEGMEEXXXXXXXXXXXXXGDTVSGAKWAQAMVATCIACFASFAGIFLLISKRIANGIDLSHAYMFATGAILTAALIHIIPESFERFEDAELGLHDLGIHTGVTMLAGITASIIIRAVCTAGHSHTGAPAT--------AKVVGADGSQSRGPTTPTIP--------ENLWELVQQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLASGIPAILGAVLILGLGDQFTTFQIAIILLLGAGSFIFIGLTELLPEALS--STVDGKGLGDSLR----KLGSFAFGALVIGIPLMFHAHCHADEGHEGHDH 508
BLAST of mRNA_Ecto-sp9_F_contig953.17660.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV2_ECTSI) HSP 1 Score: 395 bits (1014), Expect = 1.570e-125 Identity = 214/350 (61.14%), Postives = 261/350 (74.57%), Query Frame = 1
Query: 595 SFAGIVVVASKHVANNVDLSHAFVFASGALLTAALLHIIPEALEGLEESYDSLHDLGLYAGLAVMGGISLGIVLHALLESGHSHSPGESXXXXXXXXEAXXXXX-----KAAADTGT---------------------------SEATLPLSPVESNSDNLQALITARKGKSLLDVKGLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNGGMSLMQAFVYNFLSALSAVLGTVIILALQDTLSEKDIAIVLLVGAGSFIFIALCELLPGALAVAALVAKKGGGAIARSQVLKLGSFLLGAIVIGIPLLFDEHCGSGHD-HDH 1545
SFAG++VV +K VA ++ LSHAF+FASGALLTAALLHIIPEA+EGL+ SYD+LHDLGLYA L V+ G+ + IV+H L+ESGHSHSP E+ + + D T ++ T P SP ES++DNL+ALI R+G+SLLDVKGL+PVCWNV+ GDLVHNFADGV IGAAFL+CS T+GWTV AS VLHE+PHE+ADFMALLNGGMSL QAF YNFLSALSAVLGT+IIL+L DTLS+KD++IVLL+G+GSFIFIAL ELLP ALAV V++KG A+ SQ+LKLGSF+LGAI+IG+PLLFD+HC + H+ HDH
Sbjct: 5 SFAGLLVVVNKRVAYSIGLSHAFIFASGALLTAALLHIIPEAMEGLDSSYDNLHDLGLYASLTVLSGLFVSIVIHGLMESGHSHSPNEAHSHGGGEETVRPGGGNGHHARVSDDASTMMPLGLAEGDKVSAWPGGNSPQAVQIQADVTQPPSPAESSTDNLRALIAEREGRSLLDVKGLQPVCWNVVIGDLVHNFADGVTIGAAFLTCSATIGWTVTASAVLHELPHEIADFMALLNGGMSLKQAFAYNFLSALSAVLGTIIILSLGDTLSDKDVSIVLLLGSGSFIFIALSELLPEALAVTHAVSEKGAVAMMCSQLLKLGSFVLGAILIGLPLLFDQHCDAAHEGHDH 354
BLAST of mRNA_Ecto-sp9_F_contig953.17660.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRW4_ECTSI) HSP 1 Score: 399 bits (1025), Expect = 5.420e-125 Identity = 238/480 (49.58%), Postives = 310/480 (64.58%), Query Frame = 1
Query: 133 GHFEAAAVYDVE-AGTNSLAAYPGGGSFEEETFAFMVVPAASADLDGLEAAEEDAEAAWDEYTSGAEDATVLASGESATPSADVVYQVTLEDPLVLVQVEVTAAGAYAVFLEHGSDEEG-------GDEXXXXXXXXXDEI-----GTATAGKWGNALVASLVVSACSFAGIVVVASKHVANNVDLSHAFVFASGALLTAALLHIIPEALEGLEESYDSLHDLGLYAGLAVMGGISLGIVLHALLESGHSHSPGESXXXXXXXXEAXXXXXKAAADTGTSEA-TLPLSPVESNSDNLQALITARKGKSLLDVKGLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNGGMSLMQAFVYNFLSALSAVLGTVIILALQDTLSEKDIAIVLLVGAGSFIFIALCELLPGALAVAALVAKKGGGAIARSQVLKLGSFLLGAIVIGIPLLFDEHCGSG 1530
GHFEAAAVY +E AGT+S+ A PG E T AFM+VPAASAD +GL AEEDAEAAWD + G EDATVLASGE+ P A VVYQ TL++ +++V EVT AGAYA+ LEHG E G DE T + KW A+VA+ + SF GI ++ +K +AN VDLSHA++FA+GA+LTA+L+HI+PE+ E E+S L+DLG++ G+ ++ GI+ +++ A+ +GHSH+ A AD G S T P P DNL L+ RKG++L D KGL+P+CWNVI GD VH+F G IGAAFLSC +TMGWT+ AS ++HEVP E+ADF+ALLNGGMS+ QA +N +S + A+LG V+ILAL D + IAI+LL+GAGSFIFI L ELLP AL++ + KG G + KLGSF GA++IGIPL+F HC +G
Sbjct: 50 GHFEAAAVYVLEEAGTHSVIAVPG--EDFEGTLAFMLVPAASADYEGLAGAEEDAEAAWDAFMDGEEDATVLASGETVIPDATVVYQTTLDESIIVVPAEVTDAGAYALLLEHGGGEVSTALISPLGTAVAASVSEFMDEEEEEEGDTVSGAKWAQAIVATCIACFTSFVGIFLLINKRIANGVDLSHAYMFATGAILTASLIHIVPESFERFEDSELGLYDLGIHTGVTMLAGITASVIIRAVCTAGHSHTG------------APATAKVVEADGGQSRGPTTPTIP-----DNLLELVEQRKGRALFDFKGLKPICWNVIVGDAVHSFTCGFTIGAAFLSCGSTMGWTITASTLIHEVPSEMADFVALLNGGMSIKQALTWNLVSGIPAILGAVLILALGDQFTNFQIAIILLLGAGSFIFIGLTELLPEALSLT--MDGKGLG----DSIRKLGSFAFGALIIGIPLMFHAHCHAG 504
BLAST of mRNA_Ecto-sp9_F_contig953.17660.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNP7_ECTSI) HSP 1 Score: 357 bits (916), Expect = 7.760e-111 Identity = 222/394 (56.35%), Postives = 282/394 (71.57%), Query Frame = 1
Query: 412 VLVQVEVTAAGAYAVFLEHGSDEEG-----------------GDEXXXXXXXXXDEIGTATAGKWGNALVASLVVSACSFAGIVVVASKHVANNVDLSHAFVFASGALLTAALLHIIPEALEGLEESYDSLHDLGLYAGLAVMGGISLGIVLHALLESGHSHSPGESXXXXXXXXEAXXXXXKAAADTGTSEATLPLSPVESNSDNLQALITARKGKSLLDVKGLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNGGMSLMQAFVYNFLSALSAVLGTVIILALQDTLSEKDIAIVLLVGAGSFIFIALCELLPGALAVAALVAKKGGGAIARSQVLKLGSFLLGAIVIGIPLLFDEHC-GSGHDH 1539
+++ V+V GAYA+ EHGSDE G GDEXXXXXXXXX +ATA +WGNA++A+++VS CSF GI+ + ++ VAN + LSH F FASGALLTA+LLHI+PE+LEG+ YD LHD GL+AGLA++GGI I++HALLESGH XXXXXXXX XXXXX A T PL+ + K +SL D+KGL+PVCWNVIAG+LVHNFADGV IGAAFL+C ++MGWT+ AS VLHE+P E+ADF+ALL GGMSL QAF++NFLSAL+ VLG V+IL+L+ LS+ D++++LL+G+GSFIFIAL ELLPGAL V + K GGA+ +Q+ KLGSF+LGA +IG L+FD+HC GHDH
Sbjct: 1 MMIPVDVVDTGAYALLFEHGSDEVGTALVSESGDVLVGTSEEGDEXXXXXXXXXXXX-SATAAQWGNAILATVIVSLCSFTGILTIINQKVANAIGLSHTFTFASGALLTASLLHIVPESLEGIAAEYDHLHDAGLWAGLAILGGIGFSILIHALLESGHXXXXXXXXXXXXXXXXXXXXXXXXXAGTA------PLALTD-------------KERSLFDLKGLKPVCWNVIAGELVHNFADGVTIGAAFLTCGSSMGWTITASTVLHEIPQELADFIALLAGGMSLKQAFLFNFLSALTCVLGAVVILSLRSQLSDADVSVILLLGSGSFIFIALTELLPGALEVTKAESDKAGGAVMCNQMKKLGSFVLGAALIGGALIFDQHCEAEGHDH 374
BLAST of mRNA_Ecto-sp9_F_contig953.17660.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K199_9PHAE) HSP 1 Score: 185 bits (469), Expect = 9.810e-46 Identity = 133/306 (43.46%), Postives = 175/306 (57.19%), Query Frame = 1
Query: 622 SKHVANNVDLSHAFVFASGALLTAALLHIIPEALEGLEESYDSLHDLGLYAGLAVMGGISLGIVLHALLESGHSHSPGESXXXXXXXXEAXXXXXKAAADTGTSEATLPLSPVESNSDNLQALITARKGKSLLDVKGLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNGGMSLMQAFVYNFLSALSAVLGTVIILALQDTLSEKDIAIVLLVGAGSFIFIALCELLPGALAVAALVAKKGGGAIARSQVLKLGSFLLGAIVIGIPLLFDEHCGSGHDH 1539
S VA+ + LSH F FAS ALLT LLHIIPE+LEG+ +D LHD GL+AG A++ I++HAL+ESGH XXXXXXXX XXXXX A T ++P NL AL++ R+G+SL D+KGL+ VCWNVIAG+LV NFADG AF +NFLSA + VLG V+I++L+ LS+ D+ + +L+G+GSFIFIA LLPG L V + + + GGA+ +QV KLGSFL GA + G L+F+++C H
Sbjct: 10 STKVAHAIGLSHTFTFASDALLTTFLLHIIPESLEGIVAKHDHLHDAGLWAGPAILDRTGFSILIHALMESGHXXXXXXXXXXXXXXXXXXXXXXXXXAGTAPLALKGKVTP-----GNLWALVSERQGRSLFDLKGLQLVCWNVIAGELVRNFADG----------------------------------------------AFRFNFLSAPTCVLGAVVIISLRSKLSDADVWVTILLGSGSFIFIAPTGLLPGVLEVTKVESGRAGGAVTCNQVKKLGSFLHGAALTGGALIFNQYCEGEGSH 264
BLAST of mRNA_Ecto-sp9_F_contig953.17660.1 vs.
Match: Hypothetical (protein n=8 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBT4_HETAK) HSP 1 Score: 177 bits (449), Expect = 2.550e-43 Identity = 160/489 (32.72%), Postives = 237/489 (48.47%), Query Frame = 1
Query: 202 GGSFEEETFAFMVVPAASADLDGLEAAEEDAEAAWDEYTSGAEDATVLASGESATPSAD---VVYQVTLEDPLVLVQVEVTAAGAYAVFLEHGSDE------------------EGGDEXXXXXXXXX------DEIGTATAGKWGNALVASLVVSACSFAGI----------VVVASKHVANNVDLSHAFVFASGALLTAALLHIIPEALEGLEESYDSLHDLGLYAGLAVMGGISLGIVLHALLESGHSHSPGESXXXXXXXXEAXXXXXKAAADTGTSEATLPLSPVESNSDNLQALITARKGKSLLDVKGLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNGGMSLMQAFVYNFLSALSAVLGTVIILALQDTLSEKDIAIVLLVGAGSFIFIALCELLPGALAVAALVAKKGGGAIARSQVLKLGSFLLGAIVIGIPLLFDEHCGSG-----HDHD 1542
G ++E++ + V AD GLE AEE E D D +++G T D + ++ E+ L + E AG+YAVF EHG DE E ++ DE ++ WG + A+L+ SA + AG+ V V + H+A+ F SGA+L AALLH+IPE +E D +G AG ++GG+S +++HA G + XXXXXXXX XXXX ++ + + EA P +E +D +A K + + + P WNV+ GD +HN DG+ I AF C +MGWT+ +V+ HE+P E+ADF LL+ G+S +QA + N S AVLG +I+L L + I +LL G+G F+F+ ELLP L++ +G G ++ +L F LGA+V+ +PLL HC +G HDHD
Sbjct: 84 GSEYDEDSLSIFFVAVDDADEHGLEEAEEHIEEDDDH------DPVYVSNGNILTLHQDELLLTLELEAENNLTIFTFETHDAGSYAVFFEHGPDELPFSLKNASGTALVAALSESAEDHSHESSTSEXXXXXDDEELEVSSATWGLVMGATLIASAGAAAGLALFSLLKTDRVKVLAMHLASA--------FGSGAILAAALLHLIPEGYAYIEAFVDE-EAIGWKAGATILGGLSFSLLVHA----GFAQHXXXXXXXXXXXXXXXXXXVRSGSGSRVEEA--PPQELEV-ADVKKAAGPKEKRSAAATLAEVRPQAWNVVVGDALHNCLDGMVIAVAFAGCGNSMGWTILGAVMAHEIPQEIADFFVLLDSGLSFVQALLLNLFSGFCAVLGGIIVLTAPG-LDAEGIGYMLLFGSGIFLFVGAAELLPD------LLSGRGTGGAPKALGTRLALFALGAVVVSLPLLAHLHCDAGFLAGAHDHD 543
BLAST of mRNA_Ecto-sp9_F_contig953.17660.1 vs.
Match: Hypothetical (protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U7C3_HETAK) HSP 1 Score: 145 bits (365), Expect = 1.320e-32 Identity = 144/528 (27.27%), Postives = 230/528 (43.56%), Query Frame = 1
Query: 199 GGGSFEEETFAFMVVPAASADLDGLEAAEEDAEAAWDEYTSGAEDATVLASGESATPSADVVYQVTL---EDPLVLVQVEVTAAGAYAVFLEHGSDE------------------EGGDEXXXXXXXXX---DEIGTATAGKWGNALVASLVVSACSFAGIVVVASKHVANN----VDLSHAFVFASGALLTAALLHIIPEALEGLEESYDSLHDLGLYAGLAVMGGISLGIVLHALLESGHSH----------------SPGESXXXXXXXXEAXXXXXKAAADTGTSEATLPLSPVESNSDNLQALITA------------------RKGKSLLD----------VKGLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNGGMSLMQAFVYNFLSALSAVLGTVIILALQDTLSEKDIAIVLLVGAGSFIFIALCELLPGALAVAALVAKKGGGAIARSQVLKLGSFLLGAIVIGIPLLFDEHCGSG-------HDHDH 1545
GGG + EE+ + V D GLE AE+ D +A +++G T D + + E+ + E A YA+F +H DE E E XXXXX DE+ ++ WG + A+++ A + G+V+ + + + + A F SGALL+AA++H+IPE L ES+ LG AGL ++GG+ ++LH ++ H+ +P + + +A A G EA + VE +S + + + A R+G+S + V+G+ P WN++ GD + N DG+ I AF C ++MGW V +V+ HE+P E+ DF L++ G+S QA + N S + A+ G +I+L L +L+ + +LL G+G F+F ELLP L+A GG +A V + LGA + + L+ HC +G H DH
Sbjct: 49 GGGDYSEESLSVFFVAVDDTDAHGLEEAEDHLAEDNDH------EAVYVSNGNGLTLRQDELLLTLVLDNENDETVFTFETLDASGYALFFQHSPDELDFTLKDASGTTLVAELSESSTEDHDHXXXXXXXXDELEVSST-VWGLVIGANVLAGAAAMVGLVLFSLMRGMGDRTKAIAMQLATAFGSGALLSAAIVHLIPEGY-ALIESFVDGEQLGTNAGLTILGGLMFSLILHMAIQHKHAAVDAEPGCSVKEERAAVAPTSTFEASPGGDDVVEMALEAEAVEGPPEAQVH---VEGDSCDDECGLAATNEVGDCNDCAEEGGGRLRQGRSAVKLLAALPRVGPVRGVRPQAWNLVLGDCICNGLDGMVIAVAFAGCDSSMGWIVFGAVMSHEIPQEIGDFFVLIDSGLSFGQALLANLFSGVCAIFGGIIVLLLNSSLTADVVGYMLLFGSGMFLFAGAAELLPE------LLAAPGGPKLA---VARAAMVALGAAAVVVSLMSHAHCDAGFLGAAHAHHDDH 556
BLAST of mRNA_Ecto-sp9_F_contig953.17660.1 vs.
Match: Serine (threonine protein phosphatase 2a n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AM43_PLAHL) HSP 1 Score: 131 bits (330), Expect = 1.710e-27 Identity = 93/294 (31.63%), Postives = 153/294 (52.04%), Query Frame = 1
Query: 538 ATAGKWGNALVASLVVSACSFAGIVVVASKHVANNVDLSHAFVFASGALLTAALLHIIPEALE------GLEESYDSLHDLGLYAGLAVMGGISLGIVLHALLESGHSHSPGESXXXXXXXXEAXXXXXKAAADTGTSEATLPLSPVESNSDNLQALITARKGKSLLDVKGLEPVCWNVIAGDLVHNFADGVAIGAAFLSCSTTMGWTVAASVVLHEVPHEVADFMALLNGGMSLMQAFVYNFLSALSAVLGTVIILALQDTLSEKDIAIVLLVGAGSFIFIALCELLPGALAV 1401
ATA W N LVA +V+ S GI ++ + + + ++GAL AA LHI+PE++E + + + +G + V + L + +L++ G SH+ E + T+ LS S ++ +L +D + ++P+ + ++ GDL HNF DGV I AFL+C ++G +V AS VLHE+P E ADF+ L++ G + QA ++NFLSALSA +G +++LA +E + ++L VG+G+ ++IA +LLPG L V
Sbjct: 178 ATAAVWINTLVAVAIVTILSIVGIFLLIFRVKFSTKLMDAMIALSAGALFGAAFLHILPESIEFYSAYGQMNFTLSMMFTVGFVVAMVVEMALELWV---SLVQDGESHTHDHHPATIVLDHETGKQNVTPETGEYNAADTVSLSSQNETSVSVFSL--------KVDWQTIKPMAYIILLGDLFHNFVDGVLIATAFLACDDSLGISVTASAVLHELPQEFADFIILVDSGFTPFQAVLFNFLSALSAFVGAIVVLAAVPVTNET-MGLLLAVGSGTLVYIAGTDLLPGVLRV 459 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig953.17660.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig953.17660.1 >prot_Ecto-sp9_F_contig953.17660.1 ID=prot_Ecto-sp9_F_contig953.17660.1|Name=mRNA_Ecto-sp9_F_contig953.17660.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=516bp MRRVLNTTALLCLLACAAAHTSHTSHSDHDHESHTDESSHSEGEGHFEAAback to top mRNA from alignment at Ecto-sp9_F_contig953:19543..26225- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig953.17660.1 ID=mRNA_Ecto-sp9_F_contig953.17660.1|Name=mRNA_Ecto-sp9_F_contig953.17660.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=6683bp|location=Sequence derived from alignment at Ecto-sp9_F_contig953:19543..26225- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig953:19543..26225- >mRNA_Ecto-sp9_F_contig953.17660.1 ID=mRNA_Ecto-sp9_F_contig953.17660.1|Name=mRNA_Ecto-sp9_F_contig953.17660.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3096bp|location=Sequence derived from alignment at Ecto-sp9_F_contig953:19543..26225- (Ectocarpus species9 EcSCA_722f female)back to top |