mRNA_Ecto-sp9_F_contig95.17639.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig95.17639.1
Unique NamemRNA_Ecto-sp9_F_contig95.17639.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig95.17639.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU9_ECTSI)

HSP 1 Score: 650 bits (1678), Expect = 3.600e-229
Identity = 329/343 (95.92%), Postives = 331/343 (96.50%), Query Frame = 1
Query:  118 MLGSDHRQTIAAVSRLAAYMSRTGKGINHIFKDLDSSGDGRLSHQELERALVELDINITTVQAHALVTFMDNDGDGEIDVKELDSTIRLYKRRKRAGELSTWRGNLDAQQDPVFPNWLIGRDDFQQVFSRQAKNNESTNGDRFSEEDGAYGVPEIKKALQKQPEERLHRDVQAITGWLGQQDSLRSLGAKRLMEVTNVVECQELRPGEKLFSEGDESEAFYMILDGHVVVLVKQCPVAVLGPGETFGELGLQNLEKRTATVKADPSGALLVTMRTSDYRHILSKYLMDKMQMKINLLQDTFELAKNWSHSKIRAFAYCMAHHSHAKGEYIYRQGEPAHNLYIV 1146
            MLGSDHRQTIAAVS+LAAYMSRTGKGINHIFKDLDSSGDG+LSHQELERALVELDINITTVQAHALVTFMDNDGDGEIDVKELDSTIRLYKRRKRAGELSTWRGNLDAQQDPVFPNWLIGRDDFQQVFSR            FSEEDGAYGVPEIKKALQKQPEERLHRDVQAITGWLGQQDSLRSLGAKRLMEVTNVVECQELRPGEKLFSEGDESEAFYMILDGHVVVLVKQCPVAVLGPGETFGELGLQNLEKRTATVKADPSGALLVTMRTSDYRHILSKYLMDKMQMKINLLQDTFELAKNWSHSKIRAFAYCMAHHSHAKGEYIYRQGEPAHNLYIV
Sbjct:    1 MLGSDHRQTIAAVSQLAAYMSRTGKGINHIFKDLDSSGDGKLSHQELERALVELDINITTVQAHALVTFMDNDGDGEIDVKELDSTIRLYKRRKRAGELSTWRGNLDAQQDPVFPNWLIGRDDFQQVFSR------------FSEEDGAYGVPEIKKALQKQPEERLHRDVQAITGWLGQQDSLRSLGAKRLMEVTNVVECQELRPGEKLFSEGDESEAFYMILDGHVVVLVKQCPVAVLGPGETFGELGLQNLEKRTATVKADPSGALLVTMRTSDYRHILSKYLMDKMQMKINLLQDTFELAKNWSHSKIRAFAYCMAHHSHAKGEYIYRQGEPAHNLYIV 331          
BLAST of mRNA_Ecto-sp9_F_contig95.17639.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5V3_9PHAE)

HSP 1 Score: 623 bits (1606), Expect = 1.530e-216
Identity = 337/438 (76.94%), Postives = 339/438 (77.40%), Query Frame = 1
Query:  118 MLGSDHRQTIAAVSRLAAYMSRTGKGINHIFK--------DLDSSGDGRLSHQELERALVELDINITTVQAHALVTFM------------------------------------------------------------DNDGDGEIDVKELDSTIRLYKRRKRAGELSTWRGNLDAQQDPVFPNWLIGRDDFQQVFSRQAKNNESTNGDR---------------------------FSEEDGAYGVPEIKKALQKQPEERLHRDVQAITGWLGQQDSLRSLGAKRLMEVTNVVECQELRPGEKLFSEGDESEAFYMILDGHVVVLVKQCPVAVLGPGETFGELGLQNLEKRTATVKADPSGALLVTMRTSDYRHILSKYLMDKMQMKINLLQDTFELAKNWSHSKIRAFAYCMAHHSHAKGEYIYRQGEPAHNLYIV 1146
            MLGSDHRQTIAAVSRLAAYM RTGKGINHIFK        +LDSSGDGRLSHQELERALVELDINITTVQAHALVTFM                                                            DNDGDGEIDVKELDSTIRLYKRRKRAGELSTWRGNLDAQQDPVFPNWLIGRDDFQQVFSRQAKNNEST GDR                           FSEEDGAYGVPEIKKALQKQPEERLHRDVQAITGWLGQQDSLRSLGAKRLMEVTNVVECQELRP EKLFSEGDESEAFYMILDGHVVVLVKQCPVAVLGPGETFGELGLQNLEKRTATVKADPSGALLV MRTSDYRHILSKYLMDKMQMKINLLQDTFELAKNWSHSKIRAFAYCMAHHSHAKGEYIYRQG+PAHNLYIV
Sbjct:    1 MLGSDHRQTIAAVSRLAAYMGRTGKGINHIFKGAASSELQNLDSSGDGRLSHQELERALVELDINITTVQAHALVTFMGENNDGGAGREAGQEAGSHIIRGIPRSTLLYLHLVTWHVKNTALHSGIYVKLSSPLRVSPDNDGDGEIDVKELDSTIRLYKRRKRAGELSTWRGNLDAQQDPVFPNWLIGRDDFQQVFSRQAKNNESTRGDRSNEHTTWGAVESSFAFSRGPWRPINIEFSEEDGAYGVPEIKKALQKQPEERLHRDVQAITGWLGQQDSLRSLGAKRLMEVTNVVECQELRPEEKLFSEGDESEAFYMILDGHVVVLVKQCPVAVLGPGETFGELGLQNLEKRTATVKADPSGALLVRMRTSDYRHILSKYLMDKMQMKINLLQDTFELAKNWSHSKIRAFAYCMAHHSHAKGEYIYRQGDPAHNLYIV 438          
BLAST of mRNA_Ecto-sp9_F_contig95.17639.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C935_9STRA)

HSP 1 Score: 253 bits (645), Expect = 7.760e-73
Identity = 152/429 (35.43%), Postives = 235/429 (54.78%), Query Frame = 1
Query:  127 SDHRQTIAAVSRLAAYMSRTGKGINHIFKDLDSSGDGRLSHQELERALVELDINITTVQAHALVTFMDNDGDGEIDVKELDSTIRLYKRRKRAGELSTWRGNLDAQQDPVFPNWLIGRDDFQQVFSRQAKNNESTNGDRFSEEDGAYGVPEIKKALQKQPEERLHRDVQAITGWLGQQDSLRSLGAKRLMEVTNVVECQELRPGEKLFSEGDESEAFYMILDGHVVVLVKQCPVAVLGPGETFGELGLQNLEKRTATVKADPSGAL--LVTMRTSDYRHILSKYLMDKMQMKINLLQDTFELAKNWSHSKIRAFAYCMAHHSHAKGEYIYRQGEPAHNLYIVQ---VLAQRVLRYRFVNRWPVSNKKTHQRNSMKQARTRPNHYSYPCSMYFLRHCPLLKVTINLKTSTVGEVTGEDCVLGFETRQYQV 1398
            SD   T+ A+++L ++M +  K +  + +  +S G G++ H++L  A+  L + +T+ Q  AL+ F D++G G I +K   S +++ ++R + G +      L+  +D VFPNWLI R DFQ VFSR            F    G       + +L+K P ER+H D+Q I  WL Q  +L++LGA+R +E  +VV  ++  PG  +F++G  S+AFY++  G V V +    VA L  G TFGE+GL +   R AT++A  + A+  +V +R +DY+HI+SK    +M  KI+LL        +WS SKIRAF+YCMA+  H  G+ +Y   E AH  YIV     + QR L YR  NRWP  +++  +  +++Q                        +T+NL+    G+  GED VLGF+ RQYQV
Sbjct:    9 SDPVDTVIAINKLTSFMEQRRKRLVQLLRGFESGGRGKVLHRDLYLAISNLPVQLTSQQFLALLNFADSEGTGRISIKNFCSMVQVLQQRLKEGFMG--HDALELPKDTVFPNWLISRADFQLVFSR------------FLTAGGRDLQSATENSLRKNPFERVHEDLQYIANWLSQSPALQALGAQRCLEFASVVRMEDHAPGHVVFAQGSISDAFYVVHSGSVDVEIDGVWVANLAAGATFGEMGLDSNAARIATIRASQAFAVTSVVNIRLTDYKHIMSKVNAARMARKIDLLSRHCRFGADWSCSKIRAFSYCMAYQRHPLGKVVYDTSEVAHTFYIVASGTAVLQRKLVYRLSNRWPGQSREGGEMRAVQQV-----------------------ITVNLRDVKQGDTFGEDAVLGFDKRQYQV 400          
BLAST of mRNA_Ecto-sp9_F_contig95.17639.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GSM6_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.460e-18
Identity = 79/272 (29.04%), Postives = 130/272 (47.79%), Query Frame = 1
Query:  439 AQQDPVFPNWLIGRDDFQQVFSRQAKNNESTNGDRFSEEDGAYGVPEIKKALQKQPEERLHRDVQAITGWLGQQDSLRSLGAKRLMEVTNVVECQELRPGEKLFSEGDESEAFYMILDGHVVVLVKQCPVAVLGPGETFGELGLQNLEK-RTATVKADPSG-ALLVTMRTSDYRHILSKYLMDKMQMKINLLQDTFELAKNWSHSKIRAFAYCMAHHSHAKGEYIYRQGEPAHNLYIVQV----LAQRVL------RYRFVNRWPVSNKKTH 1218
             + +P+FP WL+ R DFQ  F R         G R   ED      +++ A QK+PE+R   D+Q ++ WL    SL++L   +  E+   +      P + +F +GD  +A Y+I++G V ++V    V  L  G  FGE+ L+  +  RTA ++   SG A L+ +R  DY+  + +Y   + +     L+    + +++S +K+R F           G  +Y +GE    LYIV+     L + VL      R   +  W V + KTH
Sbjct:   34 TELNPIFPQWLVERKDFQTFFPRF--------GTRALSED-----EKLRMAAQKEPEKRNGIDIQLLSKWLLNVPSLKALNVMQAGEIAKRMRWASFAPNQLVFKKGDIGDACYIIVNGQVDIVVNGEKVGRLVKGMNFGEVALEQEDALRTADIQVTESGPADLLLIRAEDYQKNVYRYQSKRRKKLTKWLRTEVSIFRDFSDNKLRYFESVSIDLFLHPGNCVYMEGEAVGALYIVKSGTISLEKNVLFETKHRRPTGIKAWSVQSHKTH 292          
BLAST of mRNA_Ecto-sp9_F_contig95.17639.1 vs.
Match: cGMP-dependent (protein kinase n=2 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5BQD0_GADMO)

HSP 1 Score: 67.8 bits (164), Expect = 5.480e-8
Identity = 61/262 (23.28%), Postives = 109/262 (41.60%), Query Frame = 1
Query:  661 DSLRSLGAKRLMEVTNVVECQELRPGEKLFSEGDESEAFYMILDGHVVVLVKQCPVAVLGPGETFGELGLQNLEKRTATVKADPSGALLVTMRTSDYRHILSKYLMDKMQMKINLLQDTFELAKNWSHSKIRAFAYCMAHHSHAKGEYIYRQGEPAHNLYIVQVLAQRVLRYRFVNRWPVSNKKTHQRNSMKQARTRPNHYSYPCSMYFLRHCPLLKVTINLKTSTVGEVTGEDCVLGFETRQYQVVALSQDVQVCVVSRHN 1446
            D L+ L  + L ++ + +  ++   G+ +  EG+     Y++ +G + V+     +  + PG  FGEL +    KRTATVKA  S AL+  +    ++ I+ +    + +   N L+    L K     K+   A C+      +GE+I R+GE  +  +I+              +  VS  +T       +A ++P                       +KT  VG+  GE  ++  + R   +V  + D Q  VV R N
Sbjct:  150 DFLKKLEPQHLRDMVDCMYPRKYTQGQLVIQEGEPGNYLYVLAEGLLEVIQNGKLLGEMRPGTAFGELAILYNCKRTATVKAAVSCALIWALDRQTFQSIMMRTTKARHEEYFNFLRSV-SLLKELPEEKLAKIADCLEVDYFNRGEFIIREGEEGNTFFIIA-------------KGEVSVTQT------TEAHSQPK---------------------EIKTLGVGDYFGEKALISEDVRSANIVCNTNDTQCLVVDREN 370          
BLAST of mRNA_Ecto-sp9_F_contig95.17639.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A7C1F4G1_9PROT)

HSP 1 Score: 62.4 bits (150), Expect = 8.560e-8
Identity = 31/73 (42.47%), Postives = 49/73 (67.12%), Query Frame = 1
Query:  688 RLMEVTNVVECQELRPGEKLFSEGDESEAFYMILDGHVVVLVKQCPVAVLGPGETFGELGLQNLEKRTATVKA 906
            ++ ++T ++   +++ GEKLFSE DES+A Y+I +G V+V      +++L  GE  GE+ L N EKRTAT+ A
Sbjct:   23 KIKQITMLI---QVKTGEKLFSENDESDALYIIKNGSVMVKKGSIVLSILNQGECIGEITLLNREKRTATITA 92          
BLAST of mRNA_Ecto-sp9_F_contig95.17639.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=2 Tax=Polyangium TaxID=55 RepID=A0A4U1IR91_9DELT)

HSP 1 Score: 62.4 bits (150), Expect = 1.260e-7
Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = 1
Query:  676 LGAKRLMEVTNVVECQELRPGEKLFSEGDESEAFYMILDGHVVVLVK-----QCPVAVLGPGETFGELGLQNLEKRTATVKA-DPSGALLVTMRTSD--YRHILSKY 972
            LG + L +++  ++  EL PG  +F EGD     +++LDG + VL +     +  VAVLGPG+ FGE+ + ++  R+ATV+A  PS  L +T    D  YR  L  Y
Sbjct:   22 LGDEVLQDLSGSLDMIELPPGAVVFREGDSGREMFVLLDGEMEVLKQSKRKHETRVAVLGPGDWFGEMSILDVLPRSATVRAVAPSRLLRLTAHDLDSLYRRDLRAY 128          
BLAST of mRNA_Ecto-sp9_F_contig95.17639.1 vs.
Match: Uncharacterized (protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CZK9_9CILI)

HSP 1 Score: 65.9 bits (159), Expect = 1.430e-7
Identity = 73/343 (21.28%), Postives = 141/343 (41.11%), Query Frame = 1
Query:  433 LDAQQDPVFPNWLIGRDDFQQVFSRQAKN-NESTNGDRFSEEDGAYGVPEIKKALQKQPEERLHRDVQAITGWLGQQDSLRSLGAKRLMEVTNVVECQELRPGEKLFSEGDESEAFYMILDGHVVVLVKQCP-VAVLGPGETFGELGLQNLEKRTATVKADPSGALLVTMRTSDYRHILSKYLMDKMQMKINLLQ--DTFELAKNWSHSKIRAFAYCMAHHSHAKGEYIYRQGEPAHNLYIVQ---VLAQRVLRYRFVNRWPVSNKKTHQRNSMKQARTRPNHYSYPCSMYFLRHCPLLKVTINLKTSTVGEVTGEDCVLGFETRQYQVVALSQDVQVCVVSR 1440
             D +   VFP WL+GR DFQ   S  + + N +T                     +K   +R   +V+A+  W  +    + L  +   EV   +       G+ +F + D  + FY++  G V V       + ++GP  T GE  L+N   R+AT+ A    +LL  ++  DY  I+ +    K + ++++++   +      +  SK+   A+ +    + K + IY   +   N YI++   V  ++ +  +  +R P                       Y    +F+R    L+V   L+  + GE  GE+ ++    R  +VV  + D  + ++++
Sbjct:   57 FDPKLSDVFPQWLLGRQDFQDALSAHSSDLNPAT-------------------ICRKPHYQRDSLEVRALKAWTQECFFFQHLTERTANEVRKKLRTLNFNKGDTIFKQNDPGDCFYIVAKGLVEVYKDGIEFIDIIGPKNTIGECALENNCLRSATLIAKTPVSLLF-LKNDDYNDIVHR---QKHKERLDMIEYLKSIPFFCTFYGSKLERIAWNLFPMQYKKNQIIYSINDEPMNFYIIRKGSVKMEKTVSLKLKSRMPCG---------------------YKSQKFFVRERTYLQV---LRECSNGEFFGEEEIVKGIGRGCKVVCANDDTILWLLNK 352          
BLAST of mRNA_Ecto-sp9_F_contig95.17639.1 vs.
Match: Cytochrome (P450 n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6A0INT1_9BACT)

HSP 1 Score: 66.6 bits (161), Expect = 1.440e-7
Identity = 53/171 (30.99%), Postives = 83/171 (48.54%), Query Frame = 1
Query:  664 SLRSLGAKRLMEVTNVVECQELRPGEKLFSEGDESEAFYMILDGHVVVLVKQC-----PVAVLGPGETFGELGLQNLEKRTATVKADPSGALLVTMRTSDYR-----HILSKYLMDKMQMKINLLQDTFELAKNWSHSKIRAFAYCMAHHSHAKGEYIYRQGEPAHNLYIV 1146
            +L  L   R  EV + +  + +  GE +F +GD S+  Y++  G V VL+++      PVA LGPGE FGE+GL     RTATV+A     LL   R + +       +  + L+  M+ + ++      L +  + +  R    C A      GE I RQGEP+   Y++
Sbjct:  670 ALWGLSPGRREEVLSDLALRTVAAGEVVFRQGDASDRIYVVRSGEVEVLLEEPGVEPRPVARLGPGEPFGEIGLLQGVPRTATVRATTRSTLLSLGREAFHALAVEGDLTRQELVQVMERRASVSNLARALPQMDAEAVGRLAGTC-ASQGFGAGEEIVRQGEPSDRFYVL 839          
BLAST of mRNA_Ecto-sp9_F_contig95.17639.1 vs.
Match: Protein (kinase n=1 Tax=Cyanobacteria bacterium UBA8156 TaxID=2055767 RepID=A0A3C1M4R1_9CYAN)

HSP 1 Score: 65.5 bits (158), Expect = 1.700e-7
Identity = 33/102 (32.35%), Postives = 57/102 (55.88%), Query Frame = 1
Query:  610 ERLHRDVQAITGWLGQQDSLRSLGAKRLMEVTNVVECQELRPGEKLFSEGDESEAFYMILDGHVVVLVKQCPVAVLGPGETFGELGLQNLEKRTATVKADPS 915
            ER   +  A+   +   + +R+L       + ++++   + PGE +  EG+  ++FY+I++G   V+    PVAVLGPGE FGE+ L   + R+A+V A  S
Sbjct:   92 ERRREETSAVLARVAHVEVMRNLPPGEAQAMVSLLQPVSVEPGEAICREGEPGDSFYLIVEGEADVVKGDRPVAVLGPGEVFGEMALLTNQPRSASVVARTS 193          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig95.17639.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized3.600e-22995.92protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.530e-21676.94protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized7.760e-7335.43protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized1.460e-1829.04protein n=2 Tax=Aphanomyces astaci TaxID=112090 Re... [more]
cGMP-dependent5.480e-823.28protein kinase n=2 Tax=Gadus morhua TaxID=8049 Rep... [more]
Cyclic8.560e-842.47nucleotide-binding domain-containing protein n=1 T... [more]
Cyclic1.260e-737.38nucleotide-binding domain-containing protein n=2 T... [more]
Uncharacterized1.430e-721.28protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID... [more]
Cytochrome1.440e-730.99P450 n=1 Tax=Acidobacteria bacterium TaxID=1978231... [more]
Protein1.700e-732.35kinase n=1 Tax=Cyanobacteria bacterium UBA8156 Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig95contigEcto-sp9_F_contig95:46437..55993 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score651.0
Seed ortholog evalue5.9e-184
Seed eggNOG ortholog2880.D8LRU9
KEGG koko:K04345,ko:K10273
KEGG Pathwayko01522,ko04010,ko04014,ko04020,ko04024,ko04062,ko04113,ko04114,ko04138,ko04140,ko04211,ko04213,ko04261,ko04270,ko04310,ko04340,ko04341,ko04371,ko04530,ko04540,ko04611,ko04713,ko04714,ko04720,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04740,ko04742,ko04750,ko04910,ko04911,ko04912,ko04913,ko04914,ko04915,ko04916,ko04918,ko04919,ko04921,ko04922,ko04923,ko04924,ko04925,ko04926,ko04927,ko04934,ko04961,ko04962,ko04970,ko04971,ko04976,ko05012,ko05020,ko05030,ko05031,ko05032,ko05110,ko05146,ko05165,ko05166,ko05169,ko05200,ko05203,ko05205,ko05414,map01522,map04010,map04014,map04020,map04024,map04062,map04113,map04114,map04138,map04140,map04211,map04213,map04261,map04270,map04310,map04340,map04341,map04371,map04530,map04540,map04611,map04713,map04714,map04720,map04723,map04724,map04725,map04726,map04727,map04728,map04740,map04742,map04750,map04910,map04911,map04912,map04913,map04914,map04915,map04916,map04918,map04919,map04921,map04922,map04923,map04924,map04925,map04926,map04927,map04934,map04961,map04962,map04970,map04971,map04976,map05012,map05020,map05030,map05031,map05032,map05110,map05146,map05165,map05166,map05169,map05200,map05203,map05205,map05414
KEGG ModuleM00695
EggNOG free text desc.cAMP-dependent protein kinase regulator activity
EggNOG OGsCOG0664@1,KOG1113@2759
EC2.7.11.11
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko03019,ko03036,ko04121
Hectar predicted targeting categoryother localisation
Exons14
Model size2185
Cds size1929
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931034.324734-CDS-Ecto-sp9_F_contig95:46436..465371622931034.324734-CDS-Ecto-sp9_F_contig95:46436..46537Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 46437..46537 +
1692279002.3157752-CDS-Ecto-sp9_F_contig95:46436..465371692279002.3157752-CDS-Ecto-sp9_F_contig95:46436..46537Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 46437..46537 +
1622931034.3403723-CDS-Ecto-sp9_F_contig95:46873..469861622931034.3403723-CDS-Ecto-sp9_F_contig95:46873..46986Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 46874..46986 +
1692279002.326626-CDS-Ecto-sp9_F_contig95:46873..469861692279002.326626-CDS-Ecto-sp9_F_contig95:46873..46986Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 46874..46986 +
1622931034.35654-CDS-Ecto-sp9_F_contig95:47582..476961622931034.35654-CDS-Ecto-sp9_F_contig95:47582..47696Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 47583..47696 +
1692279002.335823-CDS-Ecto-sp9_F_contig95:47582..476961692279002.335823-CDS-Ecto-sp9_F_contig95:47582..47696Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 47583..47696 +
1622931034.3731732-CDS-Ecto-sp9_F_contig95:48153..483671622931034.3731732-CDS-Ecto-sp9_F_contig95:48153..48367Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 48154..48367 +
1692279002.3535938-CDS-Ecto-sp9_F_contig95:48153..483671692279002.3535938-CDS-Ecto-sp9_F_contig95:48153..48367Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 48154..48367 +
1622931034.3874822-CDS-Ecto-sp9_F_contig95:48834..489521622931034.3874822-CDS-Ecto-sp9_F_contig95:48834..48952Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 48835..48952 +
1692279002.3629136-CDS-Ecto-sp9_F_contig95:48834..489521692279002.3629136-CDS-Ecto-sp9_F_contig95:48834..48952Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 48835..48952 +
1622931034.4008436-CDS-Ecto-sp9_F_contig95:49386..494971622931034.4008436-CDS-Ecto-sp9_F_contig95:49386..49497Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 49387..49497 +
1692279002.374743-CDS-Ecto-sp9_F_contig95:49386..494971692279002.374743-CDS-Ecto-sp9_F_contig95:49386..49497Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 49387..49497 +
1622931034.4150553-CDS-Ecto-sp9_F_contig95:50241..503731622931034.4150553-CDS-Ecto-sp9_F_contig95:50241..50373Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 50242..50373 +
1692279002.383896-CDS-Ecto-sp9_F_contig95:50241..503731692279002.383896-CDS-Ecto-sp9_F_contig95:50241..50373Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 50242..50373 +
1622931034.4271343-CDS-Ecto-sp9_F_contig95:51012..511051622931034.4271343-CDS-Ecto-sp9_F_contig95:51012..51105Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 51013..51105 +
1692279002.3927162-CDS-Ecto-sp9_F_contig95:51012..511051692279002.3927162-CDS-Ecto-sp9_F_contig95:51012..51105Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 51013..51105 +
1622931034.4453406-CDS-Ecto-sp9_F_contig95:51887..520361622931034.4453406-CDS-Ecto-sp9_F_contig95:51887..52036Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 51888..52036 +
1692279002.401018-CDS-Ecto-sp9_F_contig95:51887..520361692279002.401018-CDS-Ecto-sp9_F_contig95:51887..52036Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 51888..52036 +
1622931034.4675229-CDS-Ecto-sp9_F_contig95:52279..524451622931034.4675229-CDS-Ecto-sp9_F_contig95:52279..52445Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 52280..52445 +
1692279002.4092577-CDS-Ecto-sp9_F_contig95:52279..524451692279002.4092577-CDS-Ecto-sp9_F_contig95:52279..52445Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 52280..52445 +
1622931034.4796262-CDS-Ecto-sp9_F_contig95:53347..534311622931034.4796262-CDS-Ecto-sp9_F_contig95:53347..53431Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 53348..53431 +
1692279002.4180927-CDS-Ecto-sp9_F_contig95:53347..534311692279002.4180927-CDS-Ecto-sp9_F_contig95:53347..53431Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 53348..53431 +
1622931034.4997854-CDS-Ecto-sp9_F_contig95:53761..538661622931034.4997854-CDS-Ecto-sp9_F_contig95:53761..53866Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 53762..53866 +
1692279002.427208-CDS-Ecto-sp9_F_contig95:53761..538661692279002.427208-CDS-Ecto-sp9_F_contig95:53761..53866Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 53762..53866 +
1622931034.5163152-CDS-Ecto-sp9_F_contig95:54825..549221622931034.5163152-CDS-Ecto-sp9_F_contig95:54825..54922Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 54826..54922 +
1692279002.4393177-CDS-Ecto-sp9_F_contig95:54825..549221692279002.4393177-CDS-Ecto-sp9_F_contig95:54825..54922Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 54826..54922 +
1622931034.5324829-CDS-Ecto-sp9_F_contig95:55405..557371622931034.5324829-CDS-Ecto-sp9_F_contig95:55405..55737Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 55406..55737 +
1692279002.451957-CDS-Ecto-sp9_F_contig95:55405..557371692279002.451957-CDS-Ecto-sp9_F_contig95:55405..55737Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig95 55406..55737 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931034.546083-UTR-Ecto-sp9_F_contig95:55737..559931622931034.546083-UTR-Ecto-sp9_F_contig95:55737..55993Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig95 55738..55993 +
1692279002.463298-UTR-Ecto-sp9_F_contig95:55737..559931692279002.463298-UTR-Ecto-sp9_F_contig95:55737..55993Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig95 55738..55993 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig95.17639.1prot_Ecto-sp9_F_contig95.17639.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig95 46437..55737 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig95.17639.1

>prot_Ecto-sp9_F_contig95.17639.1 ID=prot_Ecto-sp9_F_contig95.17639.1|Name=mRNA_Ecto-sp9_F_contig95.17639.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=643bp
MDNASCRNSLSRSSNRRSLSLESKHDDESDSSAGQHFDQMLGSDHRQTIA
AVSRLAAYMSRTGKGINHIFKDLDSSGDGRLSHQELERALVELDINITTV
QAHALVTFMDNDGDGEIDVKELDSTIRLYKRRKRAGELSTWRGNLDAQQD
PVFPNWLIGRDDFQQVFSRQAKNNESTNGDRFSEEDGAYGVPEIKKALQK
QPEERLHRDVQAITGWLGQQDSLRSLGAKRLMEVTNVVECQELRPGEKLF
SEGDESEAFYMILDGHVVVLVKQCPVAVLGPGETFGELGLQNLEKRTATV
KADPSGALLVTMRTSDYRHILSKYLMDKMQMKINLLQDTFELAKNWSHSK
IRAFAYCMAHHSHAKGEYIYRQGEPAHNLYIVQVLAQRVLRYRFVNRWPV
SNKKTHQRNSMKQARTRPNHYSYPCSMYFLRHCPLLKVTINLKTSTVGEV
TGEDCVLGFETRQYQVVALSQDVQVCVVSRHNAFLYLTSGELDQLYNQTQ
QDLYRYAGDSNTSYYKAVKGWQDASRMKNEVGGPLYRNRLEASERQARMP
RGSKNSRRHKHLREQASKRAVKGGLGSKSLQSTSSSAPTLPARKPAKDGG
GSRSQSSRAHSTLPTPGNAPGQLSRKELALKFPLIESGRSIR*
back to top

mRNA from alignment at Ecto-sp9_F_contig95:46437..55993+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig95.17639.1 ID=mRNA_Ecto-sp9_F_contig95.17639.1|Name=mRNA_Ecto-sp9_F_contig95.17639.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=9557bp|location=Sequence derived from alignment at Ecto-sp9_F_contig95:46437..55993+ (Ectocarpus species9 EcSCA_722f female)
ATGGACAACGCCAGCTGTCGGAACTCGCTCTCACGGAGTTCGAATAGAAG GAGCTTGTCGCTGGAGTCGAAGCACGACGATGAATCGGACAGCTCGGCGG GGTAGGCGCTCATACCAGACCACCACCAGTAAGATAGGCCTCGGCGGTGG TGGTGAACTTCACCTACCCGCCAAAACCTCGTCGTCGCATTCAATTCTTG TTTCCCCCAAAGCCGACAACTACGTACGTACGTGCTTATGTATTGTATAG CTTTTGAAACGCGTTCAATTGTTACATAAGATCAGCGGACAGATGAAAGT ACTAACTATCTTGTATGTGGGTGGAGAGTTCGGAACGGTTAGTAGACTAA ATGTAAAGACAACAACACAACAACTTCTTCAGCAACTTTCTGGCGCCTTA TTCTCTTCTATCTTACCATGGTATTATGTTACTGCAGGCAGCATTTTGAT CAAATGTTGGGCAGCGACCATCGACAAACAATCGCGGCGGTATCGCGGCT TGCTGCGTACATGAGCCGTACGGGCAAGGGCATCAACCACATCTTCAAAG GTGCAGCCTCGTCTTTTAAAACTATAGTCTGAGCTATGCAACTTCTGCCC TTGACATTGTCACGCTTTGCGTGGAGTGCAACAAGCTAAAAGTTGTGTGT TGTGGATGGCACCAGTCTAGCTTTGCTGCTTGCAAGGTCGGCACTGATGA GGAGCCACGCCAAAGTGTTCATTGGAACTATTGGTGGTCTACGTCCTTAC CGTCCTGCGCATACGCTTGAACAAGCCTTGGTTCGCAGCTGAGAAGGAAG GTCTTCGCCTACATTAAATGCATCAGACAAGAGGACAATTTTCATGTTCC TGTTCTTCTGTGTAATAACTTGTTTGTTGCCACAGAATTTTATAGTTGGC CTGTGACCACGGAAGGAAGCGGTCCGGGTCAGTTGGATCGGTACGGGTGT TCGAAGGTACCGATCAGAGACCGGGAACAGTTTTTGATATCAAGAAACAA ATGAAAGCAACCTAACCCAATCCAAGTGTTCGTGTGCTAAACATTTAGCC TATGGTAATGAGAAGCAGCGTGTGTGTGATAGGATGGCACGGCTATTGCT TGTGAACGCTGCCACCGATCAAACGCACACTGACATTCATTCACAGATCT TGACTCCAGTGGTGATGGAAGGCTCTCGCACCAAGAGCTGGAACGGGCGC TCGTGGAGCTGGACATCAATATCACGACGGTACAAGCCCACGCTCTTGTG ACCTTCATGGGTGAGAACAACGATGGGGTCCAGTTGACCACCTGTTTGGG GGGGGTAGCATAAGCGGTGGAATATGGTCGACCAGTTCACCCACGTTTTC AATATGAGCTGCCTTTGATAATAGTTATTTTATCCGTACAGTGCAGTATT CTCCCCGTATTGATCAAAGTTGTTCCGTGACACAATATTGAAAGCATCGA CGAAACAGTAATAGTAGTTGCAGGATGTTTGTGTTTTGATGAGCCTCAAC GTTGGTAGGGTGTGTTCCCTCTGGCACGGATTGTCCAGTCTCCCCCCTCG GGACAGGGAGCTGGACGGGAAGCTGGACAGGAAGCTGGCAGCCATATCAT AAGGGGAATTCCCTCGAAGCACTTTGCGTTATATGCACCTCGTAACGTGG CACGTGAAAAGCGCGAACCTACACAGCGGCATCTACGTTGTGCTTTCTCC TTTGCGTGTGTCCCCAGACAACGACGGAGATGGCGAGATCGACGTGAAGG AGTTAGACAGCACAATTCGGCTGTACAAGCGCCGAAAGCGAGCGGGCGAG CTGAGCACCTGGCGCGGCAACCTCGACGCCCAACAAGACCCGGTGTTTCC CAATTGGCTGATCGGCAGGGACGATTTTCAGCAGGTGTTTTCCAGGCAAG CAAAGAACAACGAATCCACCAACGGTGACAGGTCGAACGAACACACCAAA CGGGGTGCCGTCGACTCGTCTTTCGCCTTTTCACGAGGACCGTGGCGACC GATCAACGTTGGGTATGTTTAGAGGCCTCTTGGAGCACGCGTTCTGTCAA GGCAGCGTAGTTGCGGATCGGTCAAGCCATCGCCAAAAATCATGCGGTCC CTACAAGAAACAGACGACTTTCGAATACGAACCCAGGTGCTTCGCTTATT CCGAAGGATTTCGGCTTGAGACAAGGGACATCCGTCATAGGAGCACATCA CGTTGAACGAACGCAACCAAGGCATAGGCATCCGAGCACAAGGCACCAAA ACACTTGTGTCGAACATGCCTACAGCAACAAGGCCGCTTTTCCCCCTGCC AACAGTCCCCTAGCTGTCATCGCCTGGAGGGATGCAGGTAGTGTCTTCAG TTCCTGGCTCACTCATGAGGTGATGCTCGTTCACGTTCGCTGAATCAGGT TTTCGGAGGAAGATGGGGCCTATGGGGTGCCAGAAATAAAAAAAGCTCTC CAGAAACAACCGGAAGAACGACTTCACCGCGATGTGCAGGCCATTACCGG CTGGCTGGGGCAGCAGGTATCTTCCCTTGTGCACAGAACACACCTGCCAG AGTTTGTACGCTTGAAAAGCACACATTTTTGAAAGTACGACCAGGATCTA TGTGCGTGCGTGTTTCGCAGGGGAAACTCTTCAAGATTTTTCATTTCAAT TAGAGTACAACGGGCAGCCCCGATGAGAGCTACCTTGTATTCCTACCCCA AAGACTGCAAGGCGCAGGATGCTACCGTGCCCACGACATGGCTGCTGGAA GTCAGGTCATAATAACGTGTGCGCCTTCGCCCCGTCTAGCCAATACTCCA CAATGACGACGGCTAGCGCGCACCTACACAGTCGTAGAACATCATCTCAC AAATTACCACCTGATGTCCTGCTGGGTTGGATCAGGCACGATCTAAGAGC CGTCCATGACACAGACACTGGTCGTATTTTCTTTCGAATTTTCCCTTCAG GATTCGTTGCGGTCTTTGGGGGCGAAACGGCTAATGGAAGTGACCAACGT GGTGGAGTGTCAAGAGCTTCGGCCCGGGGAGAAGCTTTTCTCGGAAGGGG ACGAATCCGAGGTGCATGGAAAGACGTACCAGCACTCAGCAGCGCACCTT TGGCTACTAGATTTTGTTGAAGAGCCAAAGTCTGGCTGATAAGGGACTTG GTGGCTGGGAACGGATACGATACGTTGCAAACAGCGCTTTCAGGTGAAAC AGGGTTTCGTCGGTCAACCTTGCGTGTTTGTGTGGCGCCCGCAGTTTCAG CAGACGGAACTGCACCGGTATCACGGGATTCTCCTGAGCAACCTGTACCT TCTCTAAACGTATTTCTTGTTGCATGCACTACTCCGAACGCCATGGTGTA CATTATGCATTGTGTTATCTAGAGGACGCGAGTAATCAAACGGCTGACCG TGGCTCGGTTTTGGCTCGTCTTCCTCGCGAGTCACACTGTTTCAGTTGTC TTGTCTTGTCTTTCCCTTGCTACGAGAACGTCGCGTCGACTTTTTCCGAA CAGGGTCCCCGGCTCCGACACCGCGGTGACAGCGGGCGGTCCCTTGAAGA GACAGGAACTTGTTTCCTCCTTCTGGCAAACGCCCCGTACCATCAGCCCG TGTCTCGAGTACATGCCCAAATCACACCAATTATACCCGAAGGGTATCGT CTTCAGTAGATCACTGTTTCGGTCACAAAACACCTGAAAACTAGACGTCT TACTTTGTCGCGTTGAAGAGGGCCGCGTCCTACAGCAGTTGCGTACTGTC TCGAGCCGATCTTCCGTCCATGCCGCCCCCACCCCACTGCACGACGTGAT TACAGGCATTCTACATGATACTGGACGGGCACGTCGTGGTTCTTGTGAAA CAATGCCCTGTGGCCGTTCTAGGGCCGGGGGAGACGTTTGGAGAGCTGGG TCTGCAGAATCTTGAGAAACGAACCGCGACTGTCAAGGTGGGCTGATGAC TTGGAGTACCAATATTCTTCGTATACCGTGTACCATATTGTACGACGTAA AAAGGGTTCGTTTATTTCAGACCCGCCGTATACTTCGTACGGCACAGATG GCTGGAAGAGCGGCCGTGAGGTGGTGTGCACCGTGCTGGTTTGTCGGTGC AAATACTGATCAGTAGTGTGGGTTACTGCACGACGATACCCAACTATGCG ACGTGCTCGACATGTGCTGCGCACAGTACCCGGAATCTGTGTCTTCGTAG GGTTGCTTCTAGCAGAAGGAACCCGCTGGACCTCGTAAGCGCGGCCTCAA CGACAATTTCAGACTACAAAGTACCGGAGAACGAATACGCGCACAGAAGG ACCACAGTTGACAGAACATTGTTAGTGTGTAAGGTGTGGCTGACACTACA GAGCGATTCAAAACAGTCTTGTTTTTTCGTGTGTCGTAGTTAGAACACAG GTCGTTCCTTGCCGTCCAAGGGCTCCTAGTCGGGAAGATGCCGGTAGTTG CCTTGGTGACAAATTGCCGACGCTGCGGCAGTCTACTCTTTTTCGACCCG AAAGAAAGTAGCAAAGCGTGTTAAGCCTTCTCGCCGCTGGTCAACTGAAC GGCCGTTTGTGCGTCAACTTCCATAGGCCGATCCATCGGGAGCTTTGCTA GTGACGATGCGTACCAGCGACTATCGACACATTCTTTCAAAGTACCTGAT GGACAAGATGCAAATGAAGGTACGAAGGCATTTCTGCAACGAGGGGAGGG GGGAGGGGGCTTCTGTGGCGCCTGTTTGGGTATTTCTCTGGGCAGCAACG CAGATCAAGATACCTATGCTGCACGGTGCGGCATGAATGTCCTAATGGAC AAGATGCTTGCCAAGTTTAGCGTGCGTGAATGCTGAGCTACTTCGGTGAT GGCGAATGGGCGATTGAACAAACACCTGAGACCTCGGAACCCCAGCACCA GCTTCAACACCTATTGAGAACCCTTCGTGACTTACACCTCAACCCAACCC CAACCCTCTAGCCCCACCACCCTTGGCCCTGGAAGTGTTCGCTGCCGTAG CCACGGGACATTTCTACGTTGCAACTAATTTGTGGCGTATTTACTCTCGG GATATGTGTTTGGCCACGTGCTTACAGAACGCTACGCCAGACATAGTTCG AAACTGGGTTGGACACTGACAGGAGCATCCAAATGCTAGAGGCATCGATT TTGTATCCTCCAAATTTCCGCTACTAGGTGCTTGGTGTGGTGAAACCAAC GTCAAATTGTATGGTGACCCTTCGGGTGGGAGAATTCGTGTTTCTGGAAC CCCCTCCGCAGTGTGGGGTGTTTACGCGTTTGCCGAGAAGACTGTGTAGT GAAATAAAAGCCCGCCCGTTGTTGAAGTCACCGATGCCGCAGCTGCCGCG ATCTGGTGAGGAAAATCATGCCATCATTGCTTTCCGTCCCTGTGTTTAGT TCCAACGCACACATGGCCCGTGGTATGATGTGCGTGACATGAACGAAACA GATCAACCTCCTCCAAGACACGTTCGAGCTGGCTAAGAACTGGTCTCACT CCAAGATCAGGGCGTTTGCGTACTGTATGGCGCACCACAGCCACGCGAAG GGCGAATACATCTACCGGCAGGGCGAGCCTGCACACAACCTCTACATCGT GTTCAGTGGAAAGGCGAGAAGATGTTGACGAATCATACTTCGTGTTGTAC GGGATGATGATGATGACTATGGTGATGATGATGATGATGACGATATGACA CGATGTTGTCGTGTCGCGGAGAATACAACACCTCGTGTGTGTAGATCTTT CGTTCTTCTTTTTGCTCTGAATCGCTCCCTCAAGCTGCCACGTTCCCTCG GTGCGTTTTGGCGCGTCTACTCTCCCACTTCAAATCGAACGAGCCAGGTG TTGGCCCAAAGGGTGTTACGGTACCGCTTCGTGAACCGTTGGCCGGTCTC CAACAAGAAGACTCACCAACGAAATTCCATGAAGCAGGCAAGAACTCGAC CAAATCACTATTCCTACCCTTGCAGCATGTACTTTTTGCGGCATTGCCCG TTGTTGAAGGTAGGCCCAAGCCAACGAGCTACCGCGGATTTGCAAAGAGA TTGCTTTTTGGCGAAGACATAGTCTGTTCAAGCTGACGCGTTCCTGTGCG AAGACACTTGTAGCGTGTGTTCGATGCCAAACGGAGTGGGGCGAACGCTC AGTGCATGGTCGCAGACGCCGGGTGTGATCGTTGTGAGACACACATAAAC AAACCGGGACGTATACCCTGGGACATGGAAATGTTGCATGGCTAGTCATG CACAGGCGGTGGTGAATACCCTAAGAGCGGCTTTCAGAAGCTGGCAGGAA TGCTCCCCCGCTCCCCAGGCCTTTGACATCTGACGGTGCTAAACGCACCA CGCACTGAAGTTGAGGCTGAGGTTGCGAAGCTTAGTTTGGACTGAACACC AACCCAACACGGAAAGGCGCAGACGGCAAGAAACCGGACTTGCTTTCATT TTCCCAGATATTATGCATCCCTCACCACTCTGTCTCGGTGCAAAGAAAGC TATCGATCGATCTAGTTTCGTGTCATTGTTGGGTGAACGGGTTAACTCCG TCAGAGATCCCTTGGGTTCGGACAGCGCGTGTTGATCGTTGTTGCACATG CGAATGCCTCGGATTTGAAGGCCCACAAGATGTTTTCACCTGTGTCCGAG TGAGCCATTACTCCCTCACTGGGCATCACGTTGGTGTAGTGGAAGATACA TGTTAAAGGCCATCACTTTTCAAAATTGGGGTAAGATGCGCAGTGTGTTC AACTTGGAACAATAACCTGGTGCAAGAAGAACACAGCTAGTGAGTGGTGT TGATGGAGTGCAACAGTTTGAGACACCGACTCACCGCCGTCTGATGCGTG TGTTGACACCGGCGATAGAAGTCTCTGGCTCCAGCATTCCCTCCCGCTCC TTCGTGCACAGGTGACGATAAACCTGAAGACCTCGACAGTGGGAGAGGTG ACGGGAGAGGATTGCGTGCTAGGATTCGAAACCAGACAATACCAGGTATA ATATTGTAGTGTCCCGAGGGCTAAAATAGTTTTGAGTAGCTTACCGCACG ACGCTCGATCGTTATACCCCCCTTCTGAACTATGGATTGAATGAAATGGT TGGAACAAGAGCTGCGACACGAATGTAGTAAAGCGCTGAGAGAATGGAGC GACTTTATCGGTGTAAAAGCAACGGAATCCTGGCGGTGGCTGGCTGGCTT TTATTGTTGCTTGTGAAGCACGAAGTAGCGAGTCGTAGGGAAGGAATCTG TGCCACTTGGAAACCGTAAACAAACCCGTTGGTGCGTGCATGTATCTGTG GTACTCTCTCTGCCTTGCTTGACAGGTGGTGGCTCTCTCGCAGGATGTAC AGGTTTGCGTGGTTTCGAGACACAACGCTTTTCTGTACTTGACGTCGGGA GAATTGGATCAGCTCTACAACCAAACGCAGGTACGCTTATTCAGAGTGCA GTAGATTCCTCTCCTCGCAAAATCTCGTACCTACATTGTAATCATCTAGT AGCATATTCTGAAAACGCCCAGTTCGCTCGAGGAAAAATAGTTTTTTCGT AAAGCAGAGATGATTCCCTTGAGAAGCCCAACTTTCTCAAGCGACTTGCA GGACCCTCGCTTCACTAGACCAAGCATTTCCCGTCCAAGATCTTGCGAGA GAAAAAATGCAACCCACTCCCATCTTGAATTGAAGCCTCTGGAACTTGAT TTTCGCCATTAGGAGCTTTGTTGGTGCATATTCCTACACATTTATCGGGG TTTTTTTACGAGAACAACACCGGTCGGTCCAACGGATAAACACAAAACAA ACGATGACGAAAAGATCCTCCGTGTGCACCTCCTTTCGTTGTGGCGGTCG GTCACCTGTTCGAGGCCAGCCAACTCGACTCGCGATGCAAGGCACAGCAC ATGTCATGTCCGGGCTACACAGAGTAAACTCGCTATTATAGTCCAAGAGA ACCAACCAATCCGAGAACAGTACAGTTAGTTGTAGTCGTCTTGCAGCCCC CTTGTTTCAGCACGACAAATACTACCTCCGCGTAGGATAGATTTTGACTA TGCCGTTTGTCGATCTTTTTGCGGCGTGTCACATGCCAAGCCTGACTGTT TGGGAGACCTAACTTCTCGTTTTCATTTCTGTCGTGTTTTTTGGGTTTTA TGGATCCTTCCTCTCATTATATTTCATGTTTCACTAATATGTTTCGACCC TATCTAGGCAGCTAGCCTGGGAACACGGATTGTGTCCGCGTCGGTCGCAC CAGTAGAACGCAATGATCAGCAAACTGCCTACCTCGGAGCTTAGAACACC CGTGTGGTGTAGTGCGGTCTGAGGACTACAGCAGTAACAAGCGCATCCCT CGGTCTTGCGGTATTTCCTGTATGCACTGTTGTGGTGAGCAGGACCTGTA TCGATATGCGGGGGATTCGAACACATCCTACTACAAGGCCGTCAAGGGGT GGCAAGACGCCAGCAGAATGAAGAATGAGGTGGGAGGTGTCCAAAACGAC AGCGGTGTCCTTCGTACAGTAGTCTAGAAGACGATGCCCGCCCAACTAGT ACGTGGGTGTCGTCGAAGTACTTGGCCATCATACTTCAGAATCGATAACG CTACGGCACCTCCTTGACTCGTCTTTCCAATATGCAGAGGTACTGTATAG TCTACTTGTTGGTTTCATCTGTATTTGATGTACTACGCTGGTATTTCGGG ATGAAGGGGTGGGGCTGACCATGCACAAATGCCCGCCAAAACGGACCTGG TGGAGAACATCCCCTGCCCGACTCTGTAGTAACAAATGCCGGTGTTGGGC CGTGATCGTTTCTCCCGTAATGTAGTGCTCTGATGTTTGTGCAGTTTTGT TTCGTCCCGGCGCGATGCATCTATCATTTGCCGCCTGGTCGTACGCTCTC GTTGCCACGGGGGAGGGTTGGATAAAGTGTTAACGGGTACCCATCATCCA TTTCAATCGCAGGTGATAGGACCACTGTATCGGAACAGGCTCGAGGCCAG CGAACGACAGGCGAGAATGCCGCGAGGAAGCAAGAATTCCCGAAGACATA AACATCTTCGTGAGCAGGCCAGCAAGCGGGCCGTCAAGGGGGGTCTGGGT TCGAAGTCGTTGCAATCGACATCGTCATCAGCACCGACACTCCCCGCTAG AAAACCTGCCAAGGACGGCGGAGGGTCGAGATCGCAATCGTCGCGAGCAC ATTCGACTCTACCGACGCCTGGTAATGCTCCTGGACAGCTATCAAGAAAA GAGTTGGCTCTCAAGTTTCCCCTGATCGAGAGCGGCCGGAGTATACGCTG AACATAGGTAGCCTTGAAACGTGGGAGAGAGGTTTGTTTGTTGCTGCAGG ATGGCGCAGGTAGGTGTCATTTATCACGGAAACACAAACCCCACTTTGAG GAGAATCACATGCTCCACGCGTCGCCTTGTCGAGACTACGTACGTCGTTG CCGGGTAGGTTGTCAAACAGCCAGACAGCTAAACTAACAAGCGTGGGAAT CTTCACCGAGCAACAACTGATGCTCGAAGGCAATTTTTCTGGAATGTTAT CTGTGAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig95:46437..55993+

>mRNA_Ecto-sp9_F_contig95.17639.1 ID=mRNA_Ecto-sp9_F_contig95.17639.1|Name=mRNA_Ecto-sp9_F_contig95.17639.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3858bp|location=Sequence derived from alignment at Ecto-sp9_F_contig95:46437..55993+ (Ectocarpus species9 EcSCA_722f female)
ATGGACAACGCCAGCTGTCGGAACTCGCTCTCACGGAGTTCGAATAGAAG
GAGCTTGTCGCTGGAGTCGAAGCACGACGATGAATCGGACAGCTCGGCGG
GATGGACAACGCCAGCTGTCGGAACTCGCTCTCACGGAGTTCGAATAGAA
GGAGCTTGTCGCTGGAGTCGAAGCACGACGATGAATCGGACAGCTCGGCG
GGGCAGCATTTTGATCAAATGTTGGGCAGCGACCATCGACAAACAATCGC
GGCGGTATCGCGGCTTGCTGCGTACATGAGCCGTACGGGCAAGGGCATCA
ACCACATCTTCAAAGGCAGCATTTTGATCAAATGTTGGGCAGCGACCATC
GACAAACAATCGCGGCGGTATCGCGGCTTGCTGCGTACATGAGCCGTACG
GGCAAGGGCATCAACCACATCTTCAAAGATCTTGACTCCAGTGGTGATGG
AAGGCTCTCGCACCAAGAGCTGGAACGGGCGCTCGTGGAGCTGGACATCA
ATATCACGACGGTACAAGCCCACGCTCTTGTGACCTTCATGGATCTTGAC
TCCAGTGGTGATGGAAGGCTCTCGCACCAAGAGCTGGAACGGGCGCTCGT
GGAGCTGGACATCAATATCACGACGGTACAAGCCCACGCTCTTGTGACCT
TCATGGACAACGACGGAGATGGCGAGATCGACGTGAAGGAGTTAGACAGC
ACAATTCGGCTGTACAAGCGCCGAAAGCGAGCGGGCGAGCTGAGCACCTG
GCGCGGCAACCTCGACGCCCAACAAGACCCGGTGTTTCCCAATTGGCTGA
TCGGCAGGGACGATTTTCAGCAGGTGTTTTCCAGGCAAGCAAAGAACAAC
GAATCCACCAACGGTGACAGACAACGACGGAGATGGCGAGATCGACGTGA
AGGAGTTAGACAGCACAATTCGGCTGTACAAGCGCCGAAAGCGAGCGGGC
GAGCTGAGCACCTGGCGCGGCAACCTCGACGCCCAACAAGACCCGGTGTT
TCCCAATTGGCTGATCGGCAGGGACGATTTTCAGCAGGTGTTTTCCAGGC
AAGCAAAGAACAACGAATCCACCAACGGTGACAGGTTTTCGGAGGAAGAT
GGGGCCTATGGGGTGCCAGAAATAAAAAAAGCTCTCCAGAAACAACCGGA
AGAACGACTTCACCGCGATGTGCAGGCCATTACCGGCTGGCTGGGGCAGC
AGGTTTTCGGAGGAAGATGGGGCCTATGGGGTGCCAGAAATAAAAAAAGC
TCTCCAGAAACAACCGGAAGAACGACTTCACCGCGATGTGCAGGCCATTA
CCGGCTGGCTGGGGCAGCAGGATTCGTTGCGGTCTTTGGGGGCGAAACGG
CTAATGGAAGTGACCAACGTGGTGGAGTGTCAAGAGCTTCGGCCCGGGGA
GAAGCTTTTCTCGGAAGGGGACGAATCCGAGGATTCGTTGCGGTCTTTGG
GGGCGAAACGGCTAATGGAAGTGACCAACGTGGTGGAGTGTCAAGAGCTT
CGGCCCGGGGAGAAGCTTTTCTCGGAAGGGGACGAATCCGAGGCATTCTA
CATGATACTGGACGGGCACGTCGTGGTTCTTGTGAAACAATGCCCTGTGG
CCGTTCTAGGGCCGGGGGAGACGTTTGGAGAGCTGGGTCTGCAGAATCTT
GAGAAACGAACCGCGACTGTCAAGGCATTCTACATGATACTGGACGGGCA
CGTCGTGGTTCTTGTGAAACAATGCCCTGTGGCCGTTCTAGGGCCGGGGG
AGACGTTTGGAGAGCTGGGTCTGCAGAATCTTGAGAAACGAACCGCGACT
GTCAAGGCCGATCCATCGGGAGCTTTGCTAGTGACGATGCGTACCAGCGA
CTATCGACACATTCTTTCAAAGTACCTGATGGACAAGATGCAAATGAAGG
CCGATCCATCGGGAGCTTTGCTAGTGACGATGCGTACCAGCGACTATCGA
CACATTCTTTCAAAGTACCTGATGGACAAGATGCAAATGAAGATCAACCT
CCTCCAAGACACGTTCGAGCTGGCTAAGAACTGGTCTCACTCCAAGATCA
GGGCGTTTGCGTACTGTATGGCGCACCACAGCCACGCGAAGGGCGAATAC
ATCTACCGGCAGGGCGAGCCTGCACACAACCTCTACATCGTATCAACCTC
CTCCAAGACACGTTCGAGCTGGCTAAGAACTGGTCTCACTCCAAGATCAG
GGCGTTTGCGTACTGTATGGCGCACCACAGCCACGCGAAGGGCGAATACA
TCTACCGGCAGGGCGAGCCTGCACACAACCTCTACATCGTCCAGGTGTTG
GCCCAAAGGGTGTTACGGTACCGCTTCGTGAACCGTTGGCCGGTCTCCAA
CAAGAAGACTCACCAACGAAATTCCATGAAGCAGGCAAGAACTCGACCAA
ATCACTATTCCTACCCTTGCAGCATGTACTTTTTGCGGCATTGCCCGTTG
TTGAAGCCAGGTGTTGGCCCAAAGGGTGTTACGGTACCGCTTCGTGAACC
GTTGGCCGGTCTCCAACAAGAAGACTCACCAACGAAATTCCATGAAGCAG
GCAAGAACTCGACCAAATCACTATTCCTACCCTTGCAGCATGTACTTTTT
GCGGCATTGCCCGTTGTTGAAGGTGACGATAAACCTGAAGACCTCGACAG
TGGGAGAGGTGACGGGAGAGGATTGCGTGCTAGGATTCGAAACCAGACAA
TACCAGGTGACGATAAACCTGAAGACCTCGACAGTGGGAGAGGTGACGGG
AGAGGATTGCGTGCTAGGATTCGAAACCAGACAATACCAGGTGGTGGCTC
TCTCGCAGGATGTACAGGTTTGCGTGGTTTCGAGACACAACGCTTTTCTG
TACTTGACGTCGGGAGAATTGGATCAGCTCTACAACCAAACGCAGGTGGT
GGCTCTCTCGCAGGATGTACAGGTTTGCGTGGTTTCGAGACACAACGCTT
TTCTGTACTTGACGTCGGGAGAATTGGATCAGCTCTACAACCAAACGCAG
CAGGACCTGTATCGATATGCGGGGGATTCGAACACATCCTACTACAAGGC
CGTCAAGGGGTGGCAAGACGCCAGCAGAATGAAGAATGAGGTGGGAGCAG
GACCTGTATCGATATGCGGGGGATTCGAACACATCCTACTACAAGGCCGT
CAAGGGGTGGCAAGACGCCAGCAGAATGAAGAATGAGGTGGGAGGACCAC
TGTATCGGAACAGGCTCGAGGCCAGCGAACGACAGGCGAGAATGCCGCGA
GGAAGCAAGAATTCCCGAAGACATAAACATCTTCGTGAGCAGGCCAGCAA
GCGGGCCGTCAAGGGGGGTCTGGGTTCGAAGTCGTTGCAATCGACATCGT
CATCAGCACCGACACTCCCCGCTAGAAAACCTGCCAAGGACGGCGGAGGG
TCGAGATCGCAATCGTCGCGAGCACATTCGACTCTACCGACGCCTGGTAA
TGCTCCTGGACAGCTATCAAGAAAAGAGTTGGCTCTCAAGTTTCCCCTGA
TCGAGAGCGGCCGGAGTATACGCTGAGACCACTGTATCGGAACAGGCTCG
AGGCCAGCGAACGACAGGCGAGAATGCCGCGAGGAAGCAAGAATTCCCGA
AGACATAAACATCTTCGTGAGCAGGCCAGCAAGCGGGCCGTCAAGGGGGG
TCTGGGTTCGAAGTCGTTGCAATCGACATCGTCATCAGCACCGACACTCC
CCGCTAGAAAACCTGCCAAGGACGGCGGAGGGTCGAGATCGCAATCGTCG
CGAGCACATTCGACTCTACCGACGCCTGGTAATGCTCCTGGACAGCTATC
AAGAAAAGAGTTGGCTCTCAAGTTTCCCCTGATCGAGAGCGGCCGGAGTA
TACGCTGA
back to top