prot_Ecto-sp9_F_contig9466.17612.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9466.17612.1
Unique Nameprot_Ecto-sp9_F_contig9466.17612.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length146
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9466.17612.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNT3_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 2.760e-85
Identity = 137/145 (94.48%), Postives = 140/145 (96.55%), Query Frame = 0 
Query:    1 MLRRFADRSGLQKELQGFKKQLHPLKAQLKEGLRTGVEEAQRKIDEGKQASAASSVPMAGHSSGNTGDGASAGHHHRTPQQELERHLIAEEWRRAQAQMNAVTIANNQKKINANLRAGTGIHFGPTRRVWVKEDTSPYGGAGIKF 145
            MLRRFADRSGLQKELQGFKK   PLKAQLKEGLRTGVEEAQRKI+EGKQASAASSVPMAGHSSGNTGDGASAGHHHRTPQQELERHLIAEE RRAQAQMNAVTIANNQK+INANLRAG GIHFGPT+RVWVKEDTSPYGGAGIKF
Sbjct:  135 MLRRFADRSGLQKELQGFKKXXXPLKAQLKEGLRTGVEEAQRKINEGKQASAASSVPMAGHSSGNTGDGASAGHHHRTPQQELERHLIAEERRRAQAQMNAVTIANNQKRINANLRAGAGIHFGPTKRVWVKEDTSPYGGAGIKF 279
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BLAST of mRNA_Ecto-sp9_F_contig9466.17612.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU64_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 2.440e-54
Identity = 98/111 (88.29%), Postives = 102/111 (91.89%), Query Frame = 0 
Query:    1 MLRRFADRSGLQKELQGFKKQLHPLKAQLKEGLRTGVEEAQRKIDEG----KQASAASSVPMAGHSSGNTGDGASAGHHHRTPQQELERHLIAEEWRRAQAQMNAVTIANN 107
            MLRRFADRSGLQKELQGFKK+L PLKAQ KEGLRTGVEEAQRK +EG    KQAS+ASSVPMA HSSGNTGDGA AGHHHRTPQQELERH+IAEEWRRAQAQMNAVTIANN
Sbjct:    1 MLRRFADRSGLQKELQGFKKKLQPLKAQFKEGLRTGVEEAQRKTNEGTLGDKQASSASSVPMADHSSGNTGDGACAGHHHRTPQQELERHIIAEEWRRAQAQMNAVTIANN 111
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9466.17612.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized2.760e-8594.48protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.440e-5488.29protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9466contigEcto-sp9_F_contig9466:2344..3063 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9466.17612.1mRNA_Ecto-sp9_F_contig9466.17612.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9466 806..4237 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9466.17612.1 ID=prot_Ecto-sp9_F_contig9466.17612.1|Name=mRNA_Ecto-sp9_F_contig9466.17612.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=146bp
MLRRFADRSGLQKELQGFKKQLHPLKAQLKEGLRTGVEEAQRKIDEGKQA
SAASSVPMAGHSSGNTGDGASAGHHHRTPQQELERHLIAEEWRRAQAQMN
AVTIANNQKKINANLRAGTGIHFGPTRRVWVKEDTSPYGGAGIKF*
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