prot_Ecto-sp9_F_contig9459.17606.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9459.17606.1
Unique Nameprot_Ecto-sp9_F_contig9459.17606.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length104
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9459.17606.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFL4_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 6.280e-39
Identity = 72/105 (68.57%), Postives = 83/105 (79.05%), Query Frame = 0 
Query:    1 MFDTLDNALNYQARCQRDDQFSLPILVAEDGTWLERNGFMPPAKDP-GLNKLKVVYAAMPPHLKPEYLKTERLIMQLKQNLIPALEEVLSWTTKVSEVDQSHDAD 104
            MFDT DNA  YQ RC++   FSLPILV EDG  LERNG+MPPAKDP  LN+LK+VY AMPPHL PEY+KTER + QLK NLIPALE+VL  T +VSEV+  +DAD
Sbjct:    1 MFDTHDNAHAYQVRCKKVGTFSLPILVEEDGASLERNGYMPPAKDPDSLNRLKIVYGAMPPHLTPEYVKTERFVKQLK-NLIPALEQVLEATAEVSEVESGNDAD 104
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BLAST of mRNA_Ecto-sp9_F_contig9459.17606.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR4_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 5.590e-36
Identity = 72/105 (68.57%), Postives = 83/105 (79.05%), Query Frame = 0 
Query:    1 MFDTLDNALNYQARCQRDDQFSLPILVAEDGTWLERNGFMPPAKDP-GLNKLKVVYAAMPPHLKPEYLKTERLIMQLKQNLIPALEEVLSWTTKVSEVDQSHDAD 104
            MFDT DNA  YQ RC++   FSLPILV EDG  LERNG+MPPAKDP  LN+L++VY AMPPHL PEY+KTER + QLK NLIPALE+VL  T +VSEV+  HDAD
Sbjct: 2147 MFDTHDNAHAYQVRCKKVGTFSLPILVEEDGASLERNGYMPPAKDPDSLNRLRIVYGAMPPHLTPEYVKTERFVKQLK-NLIPALEQVLEATAEVSEVESGHDAD 2250
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9459.17606.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized6.280e-3968.57protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.590e-3668.57protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9459contigEcto-sp9_F_contig9459:3423..5286 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9459.17606.1mRNA_Ecto-sp9_F_contig9459.17606.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9459 3423..5290 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9459.17606.1 ID=prot_Ecto-sp9_F_contig9459.17606.1|Name=mRNA_Ecto-sp9_F_contig9459.17606.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=104bp
MFDTLDNALNYQARCQRDDQFSLPILVAEDGTWLERNGFMPPAKDPGLNK
LKVVYAAMPPHLKPEYLKTERLIMQLKQNLIPALEEVLSWTTKVSEVDQS
HDAD
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