prot_Ecto-sp9_F_contig9458.17605.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9458.17605.1
Unique Nameprot_Ecto-sp9_F_contig9458.17605.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length281
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9458.17605.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM66_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 1.450e-86
Identity = 204/231 (88.31%), Postives = 208/231 (90.04%), Query Frame = 0 
Query:    1 MSRELVVVCPASNEADPLHISAEFEIDNSSDSFGLSLRRKRERGAALPSLLPPPPFALSSLPSLLSPGAAVTPTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPVAGKAEQKNNKPRPPAHRYNGKGQTDRRSSESSYNRRPRSPQREAXXXXXXX--SGGVCGAGGRLSAFATTSAVPLSTTGGVGAAXXXXXXXXXXXGKDSRDRACVRVTVTTEMSYK 229
            MSRELVVVCPA+NEADPLHISAEFEIDNSSDSFGL+LRRKRE GAALPS LPPPPFALSSLPSLLSPGAAVTPTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   TPVAG+AEQKNNKP PPAHRYNG GQ  RRSSE SYNRRPRSPQREA         SGG+CGAGGRLSAFAT S VPLST GGVGAAXXXXXXXXXXXGK SRDRACVRVTVTTEMSYK
Sbjct:  167 MSRELVVVCPATNEADPLHISAEFEIDNSSDSFGLNLRRKREGGAALPSPLPPPPFALSSLPSLLSPGAAVTPTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---TPVAGEAEQKNNKPPPPAHRYNGTGQAHRRSSEGSYNRRPRSPQREAAAAVAAAVTSGGICGAGGRLSAFATASTVPLSTRGGVGAAXXXXXXXXXXXGKVSRDRACVRVTVTTEMSYK 394
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BLAST of mRNA_Ecto-sp9_F_contig9458.17605.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG52_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 8.780e-68
Identity = 130/166 (78.31%), Postives = 137/166 (82.53%), Query Frame = 0 
Query:  115 VAGKAEQKNNKPRPPAHRYNGKGQTDRRSSESSYNRRPRSPQREAXXXXXXXSGGVCGAGGRLSAFATTSAVPLSTTGGVGAAXXXXXXXXXXXGKDSRDRACVRVTVTTEMSYKICDANPSSEDDAVIAVVTGVFERVFRVRVSGAVQGVQPTDENPIVGIKLER 280
            +AG+AE+KNNKPRPP H  +G GQ DRRSSE SYNRRPRSPQ EA       + GVCGAGGRLSAFA+TSAVP ST GGVGAA           GKDSRDRACVRVTVTTEMSYKICDANPS+EDDAVIAVVTGVFERVFRV VSGAVQGVQPTDENPIVGIKLER
Sbjct:  709 LAGEAEKKNNKPRPPTHLDSGTGQADRRSSEGSYNRRPRSPQGEAAAAAAATNEGVCGAGGRLSAFASTSAVP-STRGGVGAATGAAGPGAGEGGKDSRDRACVRVTVTTEMSYKICDANPSNEDDAVIAVVTGVFERVFRVGVSGAVQGVQPTDENPIVGIKLER 873
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9458.17605.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.450e-8688.31protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized8.780e-6878.31protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9458contigEcto-sp9_F_contig9458:1579..4847 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9458.17605.1mRNA_Ecto-sp9_F_contig9458.17605.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9458 1360..4901 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9458.17605.1 ID=prot_Ecto-sp9_F_contig9458.17605.1|Name=mRNA_Ecto-sp9_F_contig9458.17605.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=281bp
MSRELVVVCPASNEADPLHISAEFEIDNSSDSFGLSLRRKRERGAALPSL
LPPPPFALSSLPSLLSPGAAVTPTTATTTGTASGTSSGGSVGVPTASGAA
TPAAAPAAVAAATPVAGKAEQKNNKPRPPAHRYNGKGQTDRRSSESSYNR
RPRSPQREAAAAAAATSGGVCGAGGRLSAFATTSAVPLSTTGGVGAAAGA
AGAGAGEGGKDSRDRACVRVTVTTEMSYKICDANPSSEDDAVIAVVTGVF
ERVFRVRVSGAVQGVQPTDENPIVGIKLER*
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