prot_Ecto-sp9_F_contig9453.17603.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9453.17603.1
Unique Nameprot_Ecto-sp9_F_contig9453.17603.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length363
Homology
BLAST of mRNA_Ecto-sp9_F_contig9453.17603.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIG1_ECTSI)

HSP 1 Score: 617 bits (1592), Expect = 2.250e-221
Identity = 349/362 (96.41%), Postives = 352/362 (97.24%), Query Frame = 0
Query:    1 MTSGVGSERKQYGQQTAAAATDVEEGLGARSRTSXXXXXXXXXRRRWRGGVRVERGSLQRRFSSTALGQQGGWAARAKGLLGGVGALFCSPRADGDDSGDSDEEQAIEEAFERKLQEAIAVGAAAEEAGGGVLGGAGASGRDGSGGVVDMTAAGRGGAVDVPPGISWAALVAVAATQLAFVGLFVWVASAAMREQVVSACMVSPAATALGVAGMVPLLGYGLLLDRWTEWEWVRKIDEATSEVALQLFGSKRQLGKVTGVVIPLSMLVGLCEECAFRGFLPLILAAKTGLPMAAIVALSATIFGSLHAATVAYFLTATLSGMFFHGLFLSTGNIFVPIVAHAVYDAIALVRYHVKVTAPKPQ 362
            MTSGVGSERKQ GQQTAAAATD+EEGLGARSRTS XXXXXXXXRRRWRGGVRVERGSLQRR SSTALGQQGGWAARAKGLLGGVGALFCSPRADGDDSGDSDEEQAIEEAFERK+QEAIAVGAAAEEAGGGVLGGAGASGRD    VVDMTA+GRGGAVDVPPGISW ALVAVAATQLAFVGLFV VASAAMREQVVSACMVSPAATALGVAGMVPLLGYGLLLDRWTEWEWVRKIDEATSEVALQLFGSKRQLGKVTGVVIPLSMLVGLCEECAFRGFLPLILAAKTGLPMAAIV LSATIFGSLHAATVAYFLTATLSGMFFHGLFLSTGNIFVPIVAHAVYDAIALVRYHVKVTAPKPQ
Sbjct:   17 MTSGVGSERKQCGQQTAAAATDLEEGLGARSRTSSXXXXXXXXRRRWRGGVRVERGSLQRRLSSTALGQQGGWAARAKGLLGGVGALFCSPRADGDDSGDSDEEQAIEEAFERKIQEAIAVGAAAEEAGGGVLGGAGASGRDXXXXVVDMTASGRGGAVDVPPGISWVALVAVAATQLAFVGLFVLVASAAMREQVVSACMVSPAATALGVAGMVPLLGYGLLLDRWTEWEWVRKIDEATSEVALQLFGSKRQLGKVTGVVIPLSMLVGLCEECAFRGFLPLILAAKTGLPMAAIVGLSATIFGSLHAATVAYFLTATLSGMFFHGLFLSTGNIFVPIVAHAVYDAIALVRYHVKVTAPKPQ 378          
BLAST of mRNA_Ecto-sp9_F_contig9453.17603.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIG3_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 2.800e-53
Identity = 107/198 (54.04%), Postives = 129/198 (65.15%), Query Frame = 0
Query:  164 GISWAALVAVAATQLAFVGLFVWVASAAMREQVVSACMVSPAATALGVAGMVPLLGYGLLLDRWTEWEWVRKIDEATSEVALQLFGSKRQLGKVTGVVIPLSMLVGLCEECAFRGFLPLILAAKTGLPMAAIVALSATIFGSLHAATVAYFLTATLSGMFFHGLFLSTGNIFVPIVAHAVYDAIALVRYHVKVTAPKP 361
            GI+W  LV     Q  F G+F  +A  AMR QV S+  V+     +G+ G +PL  YGL L+   +W WVRK    T    L+LFGSKRQ+ KV  V IPLSMLV   EEC FRG LPLILA  T LP AAIV LS    G LHA ++AYFL ATL+G+FFH L LSTGNIFVP+VAHAV++A ALV  H+K +  +P
Sbjct:  132 GINWRLLVEDILVQPLFFGIFAVLAKPAMRGQVKSSLSVTLHGACVGILGSLPLFAYGLFLETRRDWGWVRKAQATTERAVLKLFGSKRQVTKVAAVSIPLSMLVSASEECGFRGLLPLILATHTSLPTAAIVVLSGIFCGVLHAVSLAYFLNATLNGIFFHCLLLSTGNIFVPMVAHAVHNAFALVHCHIKTSGGEP 329          
BLAST of mRNA_Ecto-sp9_F_contig9453.17603.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEH8_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 1.990e-43
Identity = 94/203 (46.31%), Postives = 136/203 (67.00%), Query Frame = 0
Query:  162 PPGISWAALVAVAATQLAFVGLFVWVASAAMREQVVSACMVSPAATALGVAGMVPLLGYGLLLDRWTEWEWVRKIDE-ATSEVA-LQLFGSKRQLGKVTGVVIPLSMLVGLCEECAFRGFLPLILAAKTGLPMAAIVALSATIFGSLHAATVAYFLTATLSGMFFHGLFLSTGNIFVPIVAHAVYDAIALVRYHVKVTAPKPQ 362
            P GI+W +++     Q+ F+G F W+A+ A+REQ+ S+ ++S     LG AG VP+  YGL L     W W+++ ++ A +++  L LFG +RQ+ +V  V +PL+MLV LCEEC +RG +PL+L AKTGLP+AA+V +SA   G+ HA T+   + A + GM+ H L LST +I VPIVAHAV+DAI  V  H+K TA +PQ
Sbjct:  141 PAGINWTSILLSVVDQVLFLGFFAWLATPAIREQLRSSFVLSFPGIGLGAAGAVPMFVYGLYLGT-QNWPWLKRHEQKAAADIKDLNLFGRRRQVARVAVVSVPLAMLVALCEECVYRGLVPLLLVAKTGLPVAAVVGISAVFCGARHAGTLGSAIDAAVLGMYVHCLLLSTRSILVPIVAHAVFDAILFVVGHLKETA-RPQ 341          
BLAST of mRNA_Ecto-sp9_F_contig9453.17603.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG43_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 8.150e-27
Identity = 60/96 (62.50%), Postives = 72/96 (75.00%), Query Frame = 0
Query:  266 MLVGLCEECAFRGFLPLILAAKTGLPMAAIVALSATIFGSLHAATVAYFLTATLSGMFFHGLFLSTGNIFVPIVAHAVYDAIALVRYHVKVTAPKP 361
            M+V + EEC FRGFLPLILA  T LP AAIV LS    G LHA ++AYFL ATL+G+FFH L LSTGNI VP+VAHAV++A ALV  H+K +  +P
Sbjct:    1 MIVSVSEECGFRGFLPLILATHTSLPTAAIVVLSGIFCGVLHAVSLAYFLNATLNGIFFHCLLLSTGNILVPMVAHAVHNAFALVHCHLKTSGGEP 96          
BLAST of mRNA_Ecto-sp9_F_contig9453.17603.1 vs.
Match: CAAX (protease self-immunity-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC13_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.790e-13
Identity = 58/143 (40.56%), Postives = 82/143 (57.34%), Query Frame = 0
Query:  210 GVAGMVPLLGYGLLLDRWTEWEWVRKIDEATSEVALQLFGSKRQLGKVTGVVIPLSMLV--GLCEECAFRGFLPLILAAKTGLPMAAIVALSATIFGSLHAATVAYFLTATLSGMFFHGLFLSTGNIFVPIVAHAVYDAIALV 350
            GV G +P+ G   LL+  T+W WV++I E T    + L G  +  G + G+   L + +  G+ EE  FRG L   L  +  L   A VA SA +FG LHA T  Y + A ++G +F  L+L +GN+ VPIVAHAVYD  A++
Sbjct:   37 GVLGALPVAGVMALLEI-TQWGWVQRISERTRTFLITLLG--KDGGGIFGLFFALGVGIAAGVGEELMFRGLLQGGL--QRYLSTEAAVAASAVVFGLLHAVTPMYAVCAGITGAYFSLLWLWSGNLVVPIVAHAVYDIGAML 174          
BLAST of mRNA_Ecto-sp9_F_contig9453.17603.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIM6_THAOC)

HSP 1 Score: 79.3 bits (194), Expect = 8.270e-13
Identity = 53/153 (34.64%), Postives = 83/153 (54.25%), Query Frame = 0
Query:  202 VSPAATALGVAGMVPLLGYGLLLDRWTEWE-WVRKIDEATSEVALQLFGSKRQLGKVTGVVIPLSMLVGLCEECAFRGFLPLILAAKTGLPMAAIVALSATIFGSLHAATVAYFLTATLSGMFFHGLFLSTGNIFVPIVAHAVYDAIALVRYH 353
            V+PAA   G+   VPL G   ++     +   ++ + +AT    L + G KR+LG      I L +  G+ EE  FRG    +L+ K G   +A+  +S  +FG LHA T  Y L A  + +FF  ++++TGN+ +P+VAH +YD  AL+  H
Sbjct:  195 VNPAAILQGLQYCVPLFGLAGIMRVIEPYSPALQGVTKATERTVLFVMGKKRRLGFALAFSILLGLCAGVGEELLFRGVFQTLLSTKLGSSNSAL-CISGVVFGLLHAVTPLYALLAGAASVFFGYIYITTGNLAIPMVAHTIYDVGALIWAH 346          
BLAST of mRNA_Ecto-sp9_F_contig9453.17603.1 vs.
Match: Uncharacterized (protein n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12 TaxID=1797224 RepID=A0A1F3ACK4_9PROT)

HSP 1 Score: 75.1 bits (183), Expect = 4.420e-12
Identity = 56/144 (38.89%), Postives = 82/144 (56.94%), Query Frame = 0
Query:  208 ALGVAGMVPLLGYGLLLDRW---TEWEWVRKIDEATSEVALQLFGSKRQLGKVTGVVIPLSMLVGLCEECAFRGFLPLILAAKTGLPMAAIVALSATIFGSLHAATVAYFLTATLSGMFFHGLFLSTGNIFVPIVAHAVYDAIA 348
            A G+A ++PL     LL RW   T+W  + +   +  E     F +    G     ++ L+++ G+ EE  FRG L  I+  + G+  AA +A ++ IFG LHA TV Y + AT+ G +F  LFL+TG++  PIVAHAVYD IA
Sbjct:   60 AFGLAAVMPLA----LLLRWFMKTKWRPLAEFRASQLE-----FFAGIGFGLTRPRIVTLAIIAGVSEELMFRGVLQEIIDRRFGI--AAAIAATSMIFGLLHARTVLYAVIATMVGAYFSLLFLATGSLIAPIVAHAVYDFIA 192          
BLAST of mRNA_Ecto-sp9_F_contig9453.17603.1 vs.
Match: CPBP (family intramembrane metalloprotease n=1 Tax=Wenzhouxiangella sp. TaxID=1979961 RepID=A0A5Q4GZ09_9GAMM)

HSP 1 Score: 73.2 bits (178), Expect = 1.410e-11
Identity = 52/143 (36.36%), Postives = 81/143 (56.64%), Query Frame = 0
Query:  211 VAGMVPLLGYGLLLDRWTEWEWVRKIDEATSEVALQLFGSKRQLGKVTGVVIPLSMLVGLCEECAFRGFLPLILAAKTGLPMAAIVALSATIFGSLHAATVAYFLTATLSGMFFHGLFLSTGNIFVPIVAHAVYDAIALVRYH 353
            V G +PLL  G  L R + W W+R++     E+   LF          G V  +++L G+ EE  FRG +   L+   G P  A++A S  +FG++HA T AYF+ AT+ G++   ++L TGN+ +PI+ H +YD + L RY+
Sbjct:   55 VLGTLPLLLAGWWLFR-SSWAWMRELKRLVQEMVTLLFRDAPP-----GTVFLVALLAGVGEELLFRGVVQGGLSGLIG-PWGALLAAS-LLFGAMHALTRAYFVVATIMGLYLGLIYLWTGNLLIPILIHFLYDWVVL-RYY 188          
BLAST of mRNA_Ecto-sp9_F_contig9453.17603.1 vs.
Match: CPBP (family intramembrane metalloprotease n=3 Tax=Planctomycetia TaxID=203683 RepID=A0A2D7HDS7_9BACT)

HSP 1 Score: 70.5 bits (171), Expect = 2.020e-10
Identity = 51/153 (33.33%), Postives = 77/153 (50.33%), Query Frame = 0
Query:  209 LGVAGMVPLLGYGLLLDRWTEWEWVRKIDEATSEVALQLFGSKRQLGKVTGVVIPLSMLVGLCEECAFRGFLPLILA-----------AKTGLPMAAIVALSATIFGSLHAATVAYFLTATLSGMFFHGLFLSTGNIFVPIVAHAVYDAIALV 350
            +G     P+L +  ++ R   WE +R+++  T +  L+     R L      +I +S+  G+ EE  FRG+L   LA           A + L M   +  S+ +FG  H  T  Y + A L G++F GL L TGN+ VPI AHA YDA+ L+
Sbjct:   63 IGCVAAAPILLFVEIIRR-IPWEPIRELERLTDDGMLRSLLQLRPLE-----LIMVSLCAGIGEELLFRGWLMYWLANLIGLAEFSGGATSSLAMGIALVTSSLVFGFFHPITKLYIILAALMGLYFGGLLLYTGNLLVPIAAHATYDAVQLI 209          
BLAST of mRNA_Ecto-sp9_F_contig9453.17603.1 vs.
Match: CPBP (family intramembrane metalloprotease n=1 Tax=Spirochaetaceae bacterium TaxID=1898206 RepID=A0A6C1RG60_9SPIO)

HSP 1 Score: 67.0 bits (162), Expect = 2.110e-9
Identity = 57/164 (34.76%), Postives = 90/164 (54.88%), Query Frame = 0
Query:  188 ASAAMREQVVSACMVSPAATALGVAGMVPLLGYGLLLDRWTEWEWVRKIDEATSEVALQLFGSKRQLGKVTGVVIPLSMLVGLCEECAFRGFLPLILAAKTGLPMAAIVALSATIFGSLHAATVAYFLTATLSGMFFHGLFLSTGNIFVPIVAHAVYDAIALVR 351
            A+A +R  +    +VSPA+ A G+   VPLL +       T W  +R+I +    +   L     QL  +  +++ L+   G+ EE  FRG +   L A  G P+ A++  SA +FG++H  T AY + A L G++F  L L T ++  PIVAHA+YD +AL++
Sbjct:   26 AAALLRLPLSGMFVVSPASVAGGILATVPLLLF-FRFSLGTAWSPLRRIRQLLLRLLRPLL---HQLDVLRALLLGLA--AGIGEELLFRGLIQTGLTALIG-PLPALLTASA-LFGAVHWITNAYAVIAALLGVYFGLLLLLTESLVAPIVAHALYDTVALLQ 181          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9453.17603.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized2.250e-22196.41protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.800e-5354.04protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.990e-4346.31protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized8.150e-2762.50protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
CAAX3.790e-1340.56protease self-immunity-domain-containing protein n... [more]
Uncharacterized8.270e-1334.64protein n=1 Tax=Thalassiosira oceanica TaxID=15974... [more]
Uncharacterized4.420e-1238.89protein n=1 Tax=Alphaproteobacteria bacterium RIFC... [more]
CPBP1.410e-1136.36family intramembrane metalloprotease n=1 Tax=Wenzh... [more]
CPBP2.020e-1033.33family intramembrane metalloprotease n=3 Tax=Planc... [more]
CPBP2.110e-934.76family intramembrane metalloprotease n=1 Tax=Spiro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003675CAAX prenyl protease 2PFAMPF02517CPBPcoord: 261..346
e-value: 4.1E-14
score: 52.7
NoneNo IPR availablePANTHERPTHR40041FAMILY NOT NAMEDcoord: 193..358
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 188..198
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 199..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 260..280
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 292..316
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 345..362
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 317..321
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 281..291
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 224..259
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 165..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 322..344
NoneNo IPR availableTMHMMTMhelixcoord: 202..224
NoneNo IPR availableTMHMMTMhelixcoord: 165..187
NoneNo IPR availableTMHMMTMhelixcoord: 322..344
NoneNo IPR availableTMHMMTMhelixcoord: 295..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9453contigEcto-sp9_F_contig9453:1160..4586 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9453.17603.1mRNA_Ecto-sp9_F_contig9453.17603.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9453 1130..5295 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9453.17603.1 ID=prot_Ecto-sp9_F_contig9453.17603.1|Name=mRNA_Ecto-sp9_F_contig9453.17603.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=363bp
MTSGVGSERKQYGQQTAAAATDVEEGLGARSRTSSGSSSSSTSRRRWRGG
VRVERGSLQRRFSSTALGQQGGWAARAKGLLGGVGALFCSPRADGDDSGD
SDEEQAIEEAFERKLQEAIAVGAAAEEAGGGVLGGAGASGRDGSGGVVDM
TAAGRGGAVDVPPGISWAALVAVAATQLAFVGLFVWVASAAMREQVVSAC
MVSPAATALGVAGMVPLLGYGLLLDRWTEWEWVRKIDEATSEVALQLFGS
KRQLGKVTGVVIPLSMLVGLCEECAFRGFLPLILAAKTGLPMAAIVALSA
TIFGSLHAATVAYFLTATLSGMFFHGLFLSTGNIFVPIVAHAVYDAIALV
RYHVKVTAPKPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003675CAAX_protease_2