prot_Ecto-sp9_F_contig9452.17602.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9452.17602.1
Unique Nameprot_Ecto-sp9_F_contig9452.17602.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length83
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9452.17602.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U9_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 1.100e-47
Identity = 72/82 (87.80%), Postives = 75/82 (91.46%), Query Frame = 0 
Query:    1 MCDDNFSSFPTCVLKGRAHFHHDLQRLLGKAKWRAFKRSRAAATGGENEWYDKQWKAGACHGQGKIHFADSGDMHVGSWVGN 82
            MCD++ SS PTCVL+GRAHFHHDLQRLLGKAKWRAFKRS AAATGGENEWYDKQWKAGACHGQG I FA SGDM VGSWVGN
Sbjct:    1 MCDESLSSLPTCVLEGRAHFHHDLQRLLGKAKWRAFKRSCAAATGGENEWYDKQWKAGACHGQGGIRFAGSGDMCVGSWVGN 82
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9452.17602.1 vs.
Match: Phosphatidylinositol-4-phosphate (5-kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0U8_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 9.470e-11
Identity = 27/37 (72.97%), Postives = 33/37 (89.19%), Query Frame = 0 
Query:   40 RAAATGGENEWYDKQWKAGACHGQGKIHFADSGDMHV 76
            + AATGGENEWYD QWK+GA HGQG+ HFA+SGD++V
Sbjct:  152 KVAATGGENEWYDGQWKSGAFHGQGEYHFANSGDVYV 188
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9452.17602.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.100e-4787.80protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Phosphatidylinositol-4-phosphate9.470e-1172.975-kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9452contigEcto-sp9_F_contig9452:1215..2732 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9452.17602.1mRNA_Ecto-sp9_F_contig9452.17602.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9452 1215..5038 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9452.17602.1 ID=prot_Ecto-sp9_F_contig9452.17602.1|Name=mRNA_Ecto-sp9_F_contig9452.17602.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=83bp
MCDDNFSSFPTCVLKGRAHFHHDLQRLLGKAKWRAFKRSRAAATGGENEW
YDKQWKAGACHGQGKIHFADSGDMHVGSWVGN*
back to top