mRNA_Ecto-sp9_F_contig10139.176.1 (mRNA) Ectocarpus species9 EcSCA_722f female
|
Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF90_9PHAE) HSP 1 Score: 839 bits (2168), Expect = 7.960e-304 Identity = 446/463 (96.33%), Postives = 453/463 (97.84%), Query Frame = 3
Query: 153 MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVAGEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXXKKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGARDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVEPTASQSACQVHTQQTLYLEALSFLMGSIHQDCDCECDWCDDLGCQRWSVMCQDLSKFSDALACEKVNLLEGDSDGGVEFWGR 1541
M+VDRTIEIRGEERVVRQQRK H RGILLISQLLRKGTTEAAGKPVQSVVA EVELLEKGREHVEGIRERASKRGKRQPA XXXXXXXXXX AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAA+VAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDAR RMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG +DMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLV+PTASQ ACQ+HTQQTLYLEALSFLMGSIHQDCDCEC+WCDDLGC+RWSVMCQDLSKFSDALACEKVNLLEGDSDGG EFWGR
Sbjct: 1 MEVDRTIEIRGEERVVRQQRKNHIRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXX-AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG-KDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEALSFLMGSIHQDCDCECNWCDDLGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFWGR 461
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE) HSP 1 Score: 839 bits (2168), Expect = 1.960e-297 Identity = 446/463 (96.33%), Postives = 453/463 (97.84%), Query Frame = 3
Query: 153 MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVAGEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXXKKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGARDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVEPTASQSACQVHTQQTLYLEALSFLMGSIHQDCDCECDWCDDLGCQRWSVMCQDLSKFSDALACEKVNLLEGDSDGGVEFWGR 1541
M+VDRTIEIRGEERVVRQQRK H RGILLISQLLRKGTTEAAGKPVQSVVA EVELLEKGREHVEGIRERASKRGKRQPA XXXXXXXXXX AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAA+VAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDAR RMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG +DMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLV+PTASQ ACQ+HTQQTLYLEALSFLMGSIHQDCDCEC+WCDDLGC+RWSVMCQDLSKFSDALACEKVNLLEGDSDGG EFWGR
Sbjct: 1 MEVDRTIEIRGEERVVRQQRKNHIRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXX-AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG-KDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEALSFLMGSIHQDCDCECNWCDDLGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFWGR 461
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE2_9PHAE) HSP 1 Score: 465 bits (1196), Expect = 1.550e-159 Identity = 274/314 (87.26%), Postives = 276/314 (87.90%), Query Frame = 3
Query: 153 MQVDRTIEIRGEERVVR-QQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVAGEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXXKKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNTNHDIAPKIAASEGCYV-------------------------YNERKTRSDVTNP 1016
MQVDRTIEIRGEER VR QQRKKHSRG LLISQLLRKGTTEAAGKPVQ VVA EVELLEKGRE+VEGIRERASKRGKRQPAAXXXXXXXXX KKAK K ADAALSDPLALAHDGGTRSGATPETSREEA AEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAA+VAAIDAANTRALRASLQALKQHCNSS GWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDAR RMHNTNHDIAPKIA SEGCY YNERKTRSDVTNP
Sbjct: 1 MQVDRTIEIRGEEREVRLQQRKKHSRGTLLISQLLRKGTTEAAGKPVQCVVADEVELLEKGREYVEGIRERASKRGKRQPAAXXXXXXXXX-KKAKLKEADAALSDPLALAHDGGTRSGATPETSREEADAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSTGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAVSEGCYXXXXXXXXXXXXXXXXXXXXXXXXXXYNERKTRSDVTNP 313
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K647_9PHAE) HSP 1 Score: 450 bits (1158), Expect = 5.620e-154 Identity = 233/283 (82.33%), Postives = 253/283 (89.40%), Query Frame = 3
Query: 435 KRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGARDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCG 1283
KRKGAD ALSDPLALAHD GTRSGATPE SREE +EERRSSA++L+Q D VLMERVRAML A AA+QAAA+ AA++AANTRALRASLQALK+H NSSIGWT Y TALA AAGAGEHTC+D ++CHPG+RCKP E GGVS AERA SLGIR+ETFSDAR RMHNTNHDIAP+ A S+GCYVYNERKTRSDVTNPEVMALA+AFWHSDDVSRA ++MYKESKKRDAPSHPRRQLMHKGD VWRMFLESRRYLALK RLLEQDS+FTDPGRTTFLSTRCG
Sbjct: 36 KRKGADVALSDPLALAHDVGTRSGATPEASREEQASEERRSSALELIQKDHVLMERVRAMLGASAADQAAAKEAAVNAANTRALRASLQALKRHSNSSIGWTAYTTALATAAGAGEHTCSDPNLCHPGKRCKPAEPGGVSFAERAKSLGIRYETFSDARVRMHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKAFWHSDDVSRA------KNMYKESKKRDAPSHPRRQLMHKGDRVWRMFLESRRYLALKGRLLEQDSSFTDPGRTTFLSTRCG 312
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQS4_9PHAE) HSP 1 Score: 432 bits (1110), Expect = 1.790e-146 Identity = 240/311 (77.17%), Postives = 264/311 (84.89%), Query Frame = 3
Query: 153 MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVAGEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXXKKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG 1085
M VDR I +RGE+RVVRQ RKKH+RGILL S LL+KGTT+AAG + SVVA E +L EKGREH E I+ERASKRG +Q A XXXXXX K KRKGAD ALSDPLALAHDGGTRSGATPE SREE +EERRSSA++L+Q D VLMERVRAML A AA+QAAA+ AA++AANTRALRASLQALK+H NSSIGWT Y TALA AAGAGEHTC D ++C PG RCKP E GGVS AERA SLGIR+ETFSDAR RMHNTNHDIAP+ A S+GCYVYNERKTRSDVTNPEVMALA+AFWHSDDVSRATGNSG
Sbjct: 1 MLVDRIIHVRGEKRVVRQHRKKHNRGILLTSWLLKKGTTKAAGSKLSSVVADEDQLREKGREHAEAIQERASKRGNQQAAXXXXXXXSG---KGKRKGADVALSDPLALAHDGGTRSGATPEASREEQASEERRSSALELIQKDHVLMERVRAMLGASAADQAAAKEAAVNAANTRALRASLQALKRHSNSSIGWTAYTTALATAAGAGEHTCPDPNLCPPGNRCKPAEPGGVSFAERAKSLGIRYETFSDARVRMHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKAFWHSDDVSRATGNSG 308
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH54_9PHAE) HSP 1 Score: 421 bits (1081), Expect = 1.480e-142 Identity = 250/288 (86.81%), Postives = 258/288 (89.58%), Query Frame = 3
Query: 153 MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVAGEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXXKKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNP 1016
MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKP+QSV A EVELLE GREHVEGIRERASKRGKRQPA XXXXXXXXXX AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVA+ERRSSAMDLMQNDPVL+ERVRAMLD GAAEQAAA+VAAIDAANTRALRASLQALKQHCNS +A + H +DVCH GQRCKPVESGGVSLAERANSLGIRHETFSDARRRM+NTNHDIAPKIAASEG Y YNERKTRSDVTNP
Sbjct: 1 MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPMQSVFADEVELLETGREHVEGIRERASKRGKRQPAXXXXXXXXXXXX-AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVADERRSSAMDLMQNDPVLIERVRAMLDTGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSCRADHFPDSARCSSRSGRAHV---SDVCHAGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMYNTNHDIAPKIAASEGYYEYNERKTRSDVTNP 284
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBP5_9PHAE) HSP 1 Score: 386 bits (991), Expect = 1.350e-129 Identity = 225/231 (97.40%), Postives = 227/231 (98.27%), Query Frame = 3
Query: 153 MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVAGEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXXKKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESG 845
MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVA EVELLEKGREHVEGIRERASKRGKRQPA XXXXXXXXXX AKR+GADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAA+VAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESG
Sbjct: 1 MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVADEVELLEKGREHVEGIRERASKRGKRQPAXXXXXXXXXXXX-AKREGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESG 230
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA34_9PHAE) HSP 1 Score: 388 bits (996), Expect = 1.390e-128 Identity = 221/244 (90.57%), Postives = 223/244 (91.39%), Query Frame = 3
Query: 312 VELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXXKKAKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAF 1043
VE + K E VEGIRERASKRGKRQPA XXXXXXXXXX AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQ AA VAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVA GAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHN NHDIAPKIA SEGCYVYN+RKTRSDVT P R F
Sbjct: 9 VESMLKASEXVEGIRERASKRGKRQPAXXXXXXXXXXXX-AKRKGADAALSDPLALAHDGGTRSGATPETSREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQVAANVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAPGAGEHTCTDTDVCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNMNHDIAPKIAVSEGCYVYNDRKTRSDVTIPRSWLSPRLF 251
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2F6_9PHAE) HSP 1 Score: 366 bits (939), Expect = 5.240e-122 Identity = 175/202 (86.63%), Postives = 187/202 (92.57%), Query Frame = 3
Query: 918 MHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGARDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVEPTASQSACQVHTQQTLYLEALSFLMGSIHQDCDCECDWCDDLGCQRWSVMCQDLSKFSDALACEKVNLLEGDSDGG 1523
MHNTNHDIAP+ A S+GCYVYNERKTRSDVTNPEVMALA+AFWHSDDVSRATGNSG +DMYKES KRDAPSHPRRQLMHKGD VWRMFLESRRYLALK RLLEQDS+FTDPGRTTFLSTRCG LVEP SQ AC+ HTQQ LYLE+LSFLMGSIHQ+CDC+CDWCD LGC++WSVMC+DLSKFSDA ACEKV LLEGDSDGG
Sbjct: 1 MHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKAFWHSDDVSRATGNSG-KDMYKESNKRDAPSHPRRQLMHKGDRVWRMFLESRRYLALKGRLLEQDSSFTDPGRTTFLSTRCGWLVEPIVSQYACETHTQQVLYLESLSFLMGSIHQNCDCKCDWCDGLGCKKWSVMCRDLSKFSDASACEKVYLLEGDSDGG 201
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Match: MULE (domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE) HSP 1 Score: 385 bits (990), Expect = 1.090e-116 Identity = 254/524 (48.47%), Postives = 315/524 (60.11%), Query Frame = 3
Query: 30 SAIDSAWSNYMQRTPLS------RSSDLISF*DGRPDLGLAVARGSLMQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVAGEVELLEKGREHVEGIRERASKRGKRQPAAXXXXXXXXXX------KKAKRKGADAAL--SDPLALAHDGGTRSGATPETS----REEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAQVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTD-VCHPGQRCKPVESGGVSLAERANSLGIRHETFSDARRRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSGARDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVEPTASQSACQVHTQQTLYLEALSFLMGSIHQDCDCECDWCDD-LGCQRWSVMCQDLSKFSDALACEKVNLLEGDSDGGVEFWGR 1541
S IDSAWSNY QR L R +S + VA + M + R ++I GE RV+R + + H RG L S LL+KGT AA K + SVV + REHV+ ++ERA+KR XXXXXXXXXX ++ R GADA L SDPL G R P T+ R+ A+ R ++++D VL E +R +L G +AAA AA+DA NTRAL AS++ALKQH +S+IG T Y T +A AAGA +HTC D G VSL RA SLG+R TF AR RMH T+H I P+ A +G Y++ RK RSD + VM LAR FWHSDD+SRA+G+SG + M++ SKK HPRRQLM GD VW FL+ YL LK+ LL +D++FTDPGRT FLSTRCGCLVEP SQ ACQ+HTQQ LYL+A LM +IH +CDC C WCD GC +W MC+DL FS+ALACEKV+ LE D G E WGR
Sbjct: 583 SPIDSAWSNYPQRNSLQGLPTPPRRDTALSL-----SVSWTVAAAATM-LRRDVKIAGEARVIRHRWRTHPRGYHLTSTLLKKGTETAATKAIGSVVDNLEGVARMAREHVDDLQERATKRXXXXXXXXXXXXXXXXXXXXXXAERGPRLGADARLARSDPLEAHLFSGPRRSPQPTTTPPRQRQTAIDGHRDGVKQSVLEDD-VLKEELRELLRVGELGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGA-QHTCDPDDPXXXXXXXXXXXXHGAVSLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAIHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGR 1098 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10139.176.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10139.176.1 >prot_Ecto-sp9_F_contig10139.176.1 ID=prot_Ecto-sp9_F_contig10139.176.1|Name=mRNA_Ecto-sp9_F_contig10139.176.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=463bp MQVDRTIEIRGEERVVRQQRKKHSRGILLISQLLRKGTTEAAGKPVQSVVback to top mRNA from alignment at Ecto-sp9_F_contig10139:2166..4395- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10139.176.1 ID=mRNA_Ecto-sp9_F_contig10139.176.1|Name=mRNA_Ecto-sp9_F_contig10139.176.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2230bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10139:2166..4395- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10139:2166..4395- >mRNA_Ecto-sp9_F_contig10139.176.1 ID=mRNA_Ecto-sp9_F_contig10139.176.1|Name=mRNA_Ecto-sp9_F_contig10139.176.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2778bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10139:2166..4395- (Ectocarpus species9 EcSCA_722f female)back to top |