mRNA_Ecto-sp9_F_contig9445.17597.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig9445.17597.1
Unique NamemRNA_Ecto-sp9_F_contig9445.17597.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig9445.17597.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K691_9PHAE)

HSP 1 Score: 501 bits (1289), Expect = 2.480e-171
Identity = 246/254 (96.85%), Postives = 248/254 (97.64%), Query Frame = 1
Query:    1 GRPLRPSLLWMDMRSADCAEQVAETGDDALRVNSGGRGPVSAEWMIPKALWLKKNEPELFARAHYVCEYQDFINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAAAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPGLGVVEGGQTSTGSAIAWFRRLVSGGGEGLVSYKTLNEEAEAVPIGCEGLV 762
            GRPLRPSLLWMDMRSA CAEQVA+TGDDALRVNSGGRGPVSAEWMIPKALWLKKNEPELFARAHYVCEYQDFINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEV+ALGGVVGGISA AAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHG GMWGAYPDAVLPGLGV EGGQTSTGS IAWFRRLVSGGGE LVSYKTLNEEAEAVPIGCEGLV
Sbjct:   93 GRPLRPSLLWMDMRSAGCAEQVAKTGDDALRVNSGGRGPVSAEWMIPKALWLKKNEPELFARAHYVCEYQDFINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVIALGGVVGGISAEAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGSGMWGAYPDAVLPGLGVAEGGQTSTGSVIAWFRRLVSGGGEELVSYKTLNEEAEAVPIGCEGLV 346          
BLAST of mRNA_Ecto-sp9_F_contig9445.17597.1 vs.
Match: Xylulose (kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM7_ECTSI)

HSP 1 Score: 458 bits (1179), Expect = 3.180e-161
Identity = 224/228 (98.25%), Postives = 225/228 (98.68%), Query Frame = 1
Query:    1 GRPLRPSLLWMDMRSADCAEQVAETGDDALRVNSGGRGPVSAEWMIPKALWLKKNEPELFARAHYVCEYQDFINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAAAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPGLGVVEGGQTSTGSAIAWFRRLVSG 684
            GRPLRPSLLWMDMRSA CAEQVAETGDDALRVNSGGRGPVSAEWMIPKALWLKKNEPELFARAHYVCEYQDFINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVVALG VVGGISAAAAQHLGLPEG+PVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPGLGVVEGGQTSTGS IAWFRRLVSG
Sbjct:   93 GRPLRPSLLWMDMRSAGCAEQVAETGDDALRVNSGGRGPVSAEWMIPKALWLKKNEPELFARAHYVCEYQDFINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVVALGSVVGGISAAAAQHLGLPEGIPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPGLGVVEGGQTSTGSGIAWFRRLVSG 320          
BLAST of mRNA_Ecto-sp9_F_contig9445.17597.1 vs.
Match: Glycerol (kinase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TT72_CHLSO)

HSP 1 Score: 358 bits (918), Expect = 7.170e-116
Identity = 180/256 (70.31%), Postives = 207/256 (80.86%), Query Frame = 1
Query:    1 GRPLRPSLLWMDMRSADCAEQVAETGDDALRVNSGGRGPVSAEWMIPKALWLKKNEPELFARAHYVCEYQDFINFRLTGRMVASVNNASIRWHYSTTH--GWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAAAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPGLGVVEGGQTSTGSAIAWFRRLVSGGGEGLVSYKTLNEEAEAVPIGCEGLV 762
            G+ LRP+LLWMDMRSA  A +VA  GD+AL VNS G GPVSAEWM+PKALWLK+NE E+F RA  +CEYQDFINF LTGR  ASVNN SIRWHYST    GWP+S+L+KL L  LQ KWPQEV+ LG VVGG++AAAA HLGLPEGLPVAQGGADA +GMVGLGV+  G++ALLTGSSHLHLG+T D+  HG G+WG YPDA+LPG+ +VEGGQTSTGSA+AW+RRLV     G   Y  LNEEA AVP GCEG+V
Sbjct:   93 GKALRPALLWMDMRSAPQAAKVAACGDEALAVNSAGAGPVSAEWMVPKALWLKENEGEVFERAAVICEYQDFINFHLTGRWCASVNNVSIRWHYSTQRPGGWPISMLQKLGLEALQQKWPQEVLPLGAVVGGLTAAAAAHLGLPEGLPVAQGGADADIGMVGLGVIRPGQLALLTGSSHLHLGVT-DKVFHGKGIWGVYPDAILPGVHMVEGGQTSTGSAVAWYRRLV-----GEPDYAALNEEAAAVPPGCEGVV 342          
BLAST of mRNA_Ecto-sp9_F_contig9445.17597.1 vs.
Match: Glycerol (kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTS4_9STRA)

HSP 1 Score: 355 bits (912), Expect = 1.060e-114
Identity = 182/264 (68.94%), Postives = 205/264 (77.65%), Query Frame = 1
Query:    1 GRPLRPSLLWMDMR----------SADCAEQVAETGDDALRVNSGGRGPVSAEWMIPKALWLKKNEPELFARAHYVCEYQDFINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAAAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPGLGVVEGGQTSTGSAIAWFRRLVSGGGEGLVSYKTLNEEAEAVPIGCEGLV 762
            G  LRP LLWMDM            A+CA  V  TGD ALRVNS G+GPVSAEWMIPKALWLK+NEP+ +A A YVCEYQDF+N RLTGRMVAS+NNASIRWHY +  GWP SLL  LDL+DL  KWPQE++ LG V+GG++  AA HLGLPEGLPVAQGGADAFVG++GLGVVN GEMALLTGSSHLHLGL  DR + G GMWG+Y DAVL GL VVEGGQTSTGS  AWFR++V G     VSY+ L+ EA AVP GCEGL+
Sbjct:   91 GNALRPCLLWMDMXXXXXXXXXRSGAECAPAVLATGDAALRVNSAGQGPVSAEWMIPKALWLKRNEPDTYAAAKYVCEYQDFMNLRLTGRMVASINNASIRWHYCSKRGWPTSLLAALDLSDLMEKWPQEMLELGAVIGGLTRDAAAHLGLPEGLPVAQGGADAFVGILGLGVVNPGEMALLTGSSHLHLGLV-DREISGGGMWGSYSDAVLHGLYVVEGGQTSTGSVAAWFRKIVGGDS---VSYQELDAEAAAVPPGCEGLL 350          
BLAST of mRNA_Ecto-sp9_F_contig9445.17597.1 vs.
Match: Glycerol (kinase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VDM7_9CHLO)

HSP 1 Score: 347 bits (890), Expect = 1.580e-111
Identity = 174/256 (67.97%), Postives = 203/256 (79.30%), Query Frame = 1
Query:    1 GRPLRPSLLWMDMRSADCAEQVAETGDDALRVNSGGRGPVSAEWMIPKALWLKKNEPELFARAHYVCEYQDFINFRLTGRMVASVNNASIRWHYSTTH--GWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAAAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPGLGVVEGGQTSTGSAIAWFRRLVSGGGEGLVSYKTLNEEAEAVPIGCEGLV 762
            G+ LRP+LLWMDMRSA  A +VA  GD+AL VN GG GPVSAEWMIPKALWL + EPE+F  A  +CEYQD++NF LTGRMVASVNNASIRWHYST    GWP  LL+ + L  LQ KWPQEV+ LG VVGG++ AAA HLGLPEGLPVAQGGADA +GM+GLGV+  G++ALLTGSSHLHLG+T D+  HG G+WG YPDA+LPG+ +VEGGQTSTGSA+AW R+LV     G   Y+ LN EA AVP GCEGL+
Sbjct:   92 GQALRPALLWMDMRSAAQAARVAAAGDEALAVNGGGGGPVSAEWMIPKALWLAEKEPEVFEEAATICEYQDYLNFNLTGRMVASVNNASIRWHYSTQRPGGWPTGLLKAIGLEGLQAKWPQEVLPLGAVVGGLTPAAAAHLGLPEGLPVAQGGADADIGMIGLGVIKPGQLALLTGSSHLHLGVT-DKIFHGRGIWGVYPDALLPGVHMVEGGQTSTGSAVAWLRKLV-----GEPGYEALNAEAAAVPPGCEGLL 341          
BLAST of mRNA_Ecto-sp9_F_contig9445.17597.1 vs.
Match: Glycerol (kinase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PJ27_9CHLO)

HSP 1 Score: 329 bits (843), Expect = 7.050e-108
Identity = 160/254 (62.99%), Postives = 200/254 (78.74%), Query Frame = 1
Query:    1 GRPLRPSLLWMDMRSADCAEQVAETGDDALRVNSGGRGPVSAEWMIPKALWLKKNEPELFARAHYVCEYQDFINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAAAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPGLGVVEGGQTSTGSAIAWFRRLVSGGGEGLVSYKTLNEEAEAVPIGCEGLV 762
            G+PLRP+LLWMDMRSA  A QVA TGD AL+VNSGG GPVSAEWM+PKALWL + EP+ +  A Y+CEYQD++N+ LTG MVAS++N S+RWHY+++ GWPVSLLEKL L+ L  KWP+E++ LG  VG ++A+AA HLGLPEGL VAQGG+DAF+GMVGLGVV  G+MA+LTGSSHL LG+     LHG G++G YPDAV+PGL V+EGGQTSTGS + W    + G  +G   Y+ +N  A A+P GCEGL+
Sbjct:   93 GQPLRPALLWMDMRSAAQAAQVAATGDIALQVNSGGAGPVSAEWMVPKALWLSQEEPQTYQAASYICEYQDYMNYHLTGNMVASISNVSVRWHYNSSRGWPVSLLEKLGLSSLLDKWPKEILPLGATVGHLTASAAAHLGLPEGLLVAQGGSDAFIGMVGLGVVAPGQMAMLTGSSHLQLGMCA-APLHGRGIFGTYPDAVMPGLHVIEGGQTSTGSIVRWLSSTLIGQ-QGWPGYEAMNAAAAAIPPGCEGLL 344          
BLAST of mRNA_Ecto-sp9_F_contig9445.17597.1 vs.
Match: Glycerol (kinase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZGK8_CHLVA)

HSP 1 Score: 332 bits (851), Expect = 1.040e-105
Identity = 174/264 (65.91%), Postives = 204/264 (77.27%), Query Frame = 1
Query:    1 GRPLRPSLLWMDMRSADCAEQVAETGDDALRVNSGGRGPVSAEWMIPKALWLKKNEPELFARAHYVCEYQDFINFRLTGRMVASVNNASIRWHYSTTH--GWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAAAAQHLGLPEGLPVAQGGADAFVGMV--------GLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPGLGVVEGGQTSTGSAIAWFRRLVSGGGEGLVSYKTLNEEAEAVPIGCEGLV 762
            G+ LRP+LLWMDMRSA  A +VA  GD+AL VN GG GPVSAEWM+PK LWL+++EPE+F  A  VCEYQDF+NF LTGR VAS+NNASIRWHYST    GWP  +L  L L  L  KWP EV+ LG VVGG++AAAA+HLGLP+G+ VAQGGADA +GMV        GLGV+  G++ALLTGSSHLHLG+T D+  HG GMWG YPDA+LPG+ VVEGGQTSTGSA+AW+RRLV  G EG   Y+ LN EAEAV  GCEG+V
Sbjct:   96 GQALRPALLWMDMRSAAQAARVAACGDEALGVNGGGAGPVSAEWMVPKVLWLRESEPEVFEAAAGVCEYQDFVNFHLTGRWVASLNNASIRWHYSTRRAGGWPEGMLRTLGLEALLHKWPAEVLPLGAVVGGLTAAAAEHLGLPQGVVVAQGGADADIGMVRSGGGGGIGLGVIRPGQLALLTGSSHLHLGVT-DQVFHGKGMWGVYPDALLPGVHVVEGGQTSTGSAVAWYRRLV--GEEG---YEALNREAEAVAPGCEGVV 353          
BLAST of mRNA_Ecto-sp9_F_contig9445.17597.1 vs.
Match: Glycerol (kinase n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W972_TETOB)

HSP 1 Score: 332 bits (851), Expect = 1.560e-105
Identity = 163/254 (64.17%), Postives = 201/254 (79.13%), Query Frame = 1
Query:    1 GRPLRPSLLWMDMRSADCAEQVAETGDDALRVNSGGRGPVSAEWMIPKALWLKKNEPELFARAHYVCEYQDFINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAAAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPGLGVVEGGQTSTGSAIAWFRRLVSGGGEGLVSYKTLNEEAEAVPIGCEGLV 762
            G+PLRP+LLWMDMRSA  A QVA TGD AL+VNSGG GPVSAEWM+PKALWL + EPE F  A Y+CEYQD++NF LTGRMVAS++N S+RWHY+++ GWPVSLLEKL L+ L  KWP++++ LG  VG ++A+AA HLGLPEGL VAQGG+DAF+GMVGLGVV  G+MA+LTGSSHL LG+     LHG G++G YPDAV+PGL V+EGGQTSTGS + W    + G  +G   Y+ +N  A A+P GCEGL+
Sbjct:   93 GQPLRPALLWMDMRSAAQAAQVAATGDIALQVNSGGAGPVSAEWMVPKALWLFQEEPETFQAATYICEYQDYLNFHLTGRMVASISNVSVRWHYNSSRGWPVSLLEKLGLSSLVDKWPRDILPLGAPVGHLTASAAAHLGLPEGLLVAQGGSDAFIGMVGLGVVEPGQMAMLTGSSHLQLGMCA-APLHGKGIFGTYPDAVMPGLHVIEGGQTSTGSIVRWLSSSLIGE-QGWPGYEAMNAAAAAIPPGCEGLL 344          
BLAST of mRNA_Ecto-sp9_F_contig9445.17597.1 vs.
Match: Glycerol (kinase (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SEI4_9CHLO)

HSP 1 Score: 330 bits (845), Expect = 4.890e-105
Identity = 165/254 (64.96%), Postives = 194/254 (76.38%), Query Frame = 1
Query:    1 GRPLRPSLLWMDMRSADCAEQVAETGDDALRVNSGGRGPVSAEWMIPKALWLKKNEPELFARAHYVCEYQDFINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAAAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPGLGVVEGGQTSTGSAIAWFRRLVSGGGEGLVSYKTLNEEAEAVPIGCEGLV 762
            G  LRP+LLWMDMRSA   ++V  TGD  L+VNSGG GPVSAEWM+PKALW+K+NEP +F  A Y+CEYQDFINF LTGRM AS  NA++RWHYS   GWP SLL  L L  L+ KWP+EV+A G  VGG++  AA+HLGLP GL VAQGGADA +GMVGLGVVN GE+ALLTGSSHLHLG+T  R +HG G+WG Y DAV+ GL ++EGGQTSTGSA+ W R L++       SY  LN  AEA+P GCEGLV
Sbjct:  111 GVSLRPALLWMDMRSAPQTKEVLATGDPVLQVNSGGAGPVSAEWMVPKALWIKQNEPXVFEAATYICEYQDFINFHLTGRMCASRCNATVRWHYSPDRGWPSSLLRALGLEGLEAKWPKEVLAPGEPVGGLTQRAAEHLGLPAGLLVAQGGADAMIGMVGLGVVNDGELALLTGSSHLHLGMTR-RTMHGAGVWGTYKDAVIEGLNIIEGGQTSTGSAVNWLRLLLAE-----PSYDELNRAAEALPPGCEGLV 358          
BLAST of mRNA_Ecto-sp9_F_contig9445.17597.1 vs.
Match: Carbohydrate (kinase n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545STC5_9PROT)

HSP 1 Score: 321 bits (822), Expect = 1.570e-104
Identity = 162/255 (63.53%), Postives = 196/255 (76.86%), Query Frame = 1
Query:    1 GRPLRPSLLWMDMRSADCAEQVAETGDDALRVNSGGRGPVSAEWMIPKALWLKKNEPELFARAHYVCEYQDFINFRLTGRMVASVNNASIRWHYSTTHG-WPVSLLEKLDLADLQGKWPQEVVALGGVVGGISAAAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPGLGVVEGGQTSTGSAIAWFRRLVSGGGEGLVSYKTLNEEAEAVPIGCEGLV 762
            G  +RP+L+WMD+R+   A++VAETGD AL VNS G+GPVSAEWMIPKALWLK+NEP  F RA  +CEYQD+INF LTGR VAS+NNA++RWHY    G +  SLLEKL L  LQ KWPQEV+ LG V+GG+++ AA+HLGL E LPVAQGGADAF+ M+GLGVV  G+MA +TGSSHLHLGL  D   HG G+WG Y DA+LPG  VVEGGQTSTGS +AW +RL+    +  VSY  LN EA A+P G +GL+
Sbjct:   93 GHAVRPALIWMDVRAVAEAQRVAETGDPALGVNSDGKGPVSAEWMIPKALWLKENEPANFERASTICEYQDYINFHLTGRRVASINNAAVRWHYMAEGGGYQSSLLEKLGLGALQEKWPQEVLPLGEVIGGLTSRAAEHLGLQEALPVAQGGADAFIAMIGLGVVRPGKMAFITGSSHLHLGLA-DHAFHGQGIWGTYADALLPGYHVVEGGQTSTGSIVAWLKRLL----DPAVSYDQLNAEAAALPPGSDGLI 342          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9445.17597.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized2.480e-17196.85protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Xylulose3.180e-16198.25kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
Glycerol7.170e-11670.31kinase n=1 Tax=Chlorella sorokiniana TaxID=3076 Re... [more]
Glycerol1.060e-11468.94kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=... [more]
Glycerol1.580e-11167.97kinase n=1 Tax=Micractinium conductrix TaxID=55405... [more]
Glycerol7.050e-10862.99kinase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2... [more]
Glycerol1.040e-10565.91kinase n=1 Tax=Chlorella variabilis TaxID=554065 R... [more]
Glycerol1.560e-10564.17kinase n=1 Tax=Tetradesmus obliquus TaxID=3088 Rep... [more]
Glycerol4.890e-10564.96kinase (Fragment) n=1 Tax=Tetraselmis sp. GSL018 T... [more]
Carbohydrate1.570e-10463.53kinase n=1 Tax=Denitrobaculum tricleocarpae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9445contigEcto-sp9_F_contig9445:457..4904 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score435.3
Seed ortholog evalue1.9e-119
Seed eggNOG ortholog2880.D7FTM7
Preferred nameXK-RPE
EggNOG free text desc.glycerol kinase activity
EggNOG OGsCOG0554@1,KOG2517@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size762
Cds size732
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9445.17597.1prot_Ecto-sp9_F_contig9445.17597.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig9445 457..4874 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931027.4394438-CDS-Ecto-sp9_F_contig9445:456..5331622931027.4394438-CDS-Ecto-sp9_F_contig9445:456..533Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9445 457..533 -
1692278999.005111-CDS-Ecto-sp9_F_contig9445:456..5331692278999.005111-CDS-Ecto-sp9_F_contig9445:456..533Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9445 457..533 -
1622931027.4593158-CDS-Ecto-sp9_F_contig9445:1271..13991622931027.4593158-CDS-Ecto-sp9_F_contig9445:1271..1399Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9445 1272..1399 -
1692278999.0196493-CDS-Ecto-sp9_F_contig9445:1271..13991692278999.0196493-CDS-Ecto-sp9_F_contig9445:1271..1399Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9445 1272..1399 -
1622931027.474893-CDS-Ecto-sp9_F_contig9445:2135..22171622931027.474893-CDS-Ecto-sp9_F_contig9445:2135..2217Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9445 2136..2217 -
1692278999.0305455-CDS-Ecto-sp9_F_contig9445:2135..22171692278999.0305455-CDS-Ecto-sp9_F_contig9445:2135..2217Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9445 2136..2217 -
1622931027.490582-CDS-Ecto-sp9_F_contig9445:2632..27651622931027.490582-CDS-Ecto-sp9_F_contig9445:2632..2765Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9445 2633..2765 -
1692278999.0403302-CDS-Ecto-sp9_F_contig9445:2632..27651692278999.0403302-CDS-Ecto-sp9_F_contig9445:2632..2765Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9445 2633..2765 -
1622931027.5084078-CDS-Ecto-sp9_F_contig9445:3474..36061622931027.5084078-CDS-Ecto-sp9_F_contig9445:3474..3606Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9445 3475..3606 -
1692278999.0503137-CDS-Ecto-sp9_F_contig9445:3474..36061692278999.0503137-CDS-Ecto-sp9_F_contig9445:3474..3606Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9445 3475..3606 -
1622931027.5232563-CDS-Ecto-sp9_F_contig9445:4199..42651622931027.5232563-CDS-Ecto-sp9_F_contig9445:4199..4265Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9445 4200..4265 -
1692278999.0621316-CDS-Ecto-sp9_F_contig9445:4199..42651692278999.0621316-CDS-Ecto-sp9_F_contig9445:4199..4265Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9445 4200..4265 -
1622931027.5402827-CDS-Ecto-sp9_F_contig9445:4760..48741622931027.5402827-CDS-Ecto-sp9_F_contig9445:4760..4874Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9445 4761..4874 -
1692278999.0705864-CDS-Ecto-sp9_F_contig9445:4760..48741692278999.0705864-CDS-Ecto-sp9_F_contig9445:4760..4874Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9445 4761..4874 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931027.5572288-UTR-Ecto-sp9_F_contig9445:4874..49041622931027.5572288-UTR-Ecto-sp9_F_contig9445:4874..4904Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig9445 4875..4904 -
1692278999.0794287-UTR-Ecto-sp9_F_contig9445:4874..49041692278999.0794287-UTR-Ecto-sp9_F_contig9445:4874..4904Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig9445 4875..4904 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig9445.17597.1

>prot_Ecto-sp9_F_contig9445.17597.1 ID=prot_Ecto-sp9_F_contig9445.17597.1|Name=mRNA_Ecto-sp9_F_contig9445.17597.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=244bp
MDMRSADCAEQVAETGDDALRVNSGGRGPVSAEWMIPKALWLKKNEPELF
ARAHYVCEYQDFINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDL
ADLQGKWPQEVVALGGVVGGISAAAAQHLGLPEGLPVAQGGADAFVGMVG
LGVVNSGEMALLTGSSHLHLGLTHDRHLHGPGMWGAYPDAVLPGLGVVEG
GQTSTGSAIAWFRRLVSGGGEGLVSYKTLNEEAEAVPIGCEGLV
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mRNA from alignment at Ecto-sp9_F_contig9445:457..4904-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig9445.17597.1 ID=mRNA_Ecto-sp9_F_contig9445.17597.1|Name=mRNA_Ecto-sp9_F_contig9445.17597.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4448bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9445:457..4904- (Ectocarpus species9 EcSCA_722f female)
GGCCGTCCCCTGCGACCCTCCCTCCTGTGGATGGACATGCGATCCGCGGA CTGCGCGGAGCAGGTGGCCGAGACCGGAGACGACGCCTTGAGGGTTAACT CCGGGGGAAGGGGCCCCGTGTCTGCGGAGTGGATGATCCCCAAGGTTTGT TGGCTAGCTGCCTTGCTTCGGGACCCCGGGGTTTGTTTTTCTCACTCCTT GTTTGACGTCGGACGAAGAGAAAGGGTTTTGCATGCCGGTTGGGATTGAT GTCAGGGGAGGGGGAGGTGCTGGTTCGTGGAGACCAAGCCGGTTCATGAT TCGAATACTTGTTTGCAACCGTAACCACTATGGTTTTTCTTTTGACCCGC CACAGCCGCTGCTGCCGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTG CTGCTGCTGCTGCTGCTGCTGCTTGAATCATTTCGTGTATCGGATTTTGA ATGGGGGGCTTTCGTTCGAGGAACTGCTGTGTGCAACGGAGTTTCTTGAA GAAACAAAAAACGGCAGCAAGTGTTCGCAACAGCGGCCTATTTGCGATGC CCTGGCTTGGGCCCCCTCGATATAAAACGTCGCCTCCTCCGTCGCCCCTT TCTTAAATCCCCCCCTGTATCCTCTCCGTTGTTCGCCAGGCGCTCTGGCT CAAGAAAAACGAGCCGGAGCTGTTCGCGCGCGCGCACTACGTTTGCGAAT ATCAGGTAACATCGGAAATGCGTCTTCGCCTATCTTTCGATGTTTATTTA TGTATATGGTAAAAACACGGCATTCGACAACCAAGCATCGCCTCCTCTCG TTTGCTGGTCACCCCCCCCCAACTCCCGCGAACGCGGTGTGGAAAACCAC CTCGGTGCAGTTAAACAAAGATGTTGCAAGGTTCTGTTCACAGTCGGTTA GTCTCGAAAGTGCTTCCCATCACCTGTCGCTGACCTCTCCCTCCCCCGGC TCAACCTTAAGACTATTCTTCGCACTTGGGGAAGACGAGTGCTTCAAGAG ACGAAACGATTAACCCGGAAGACGTTAAGAGCATGCTGAGAGACCGATAC TCTCAAGATTACGCGAAGCAACGTGACCCCCGCGCCCGCCTTTCCAGACG CACGAATGATGACCAGCTTCTGGTCCATCCTTGTGAAACGTAGGTTGGGC GCGCGAAAACCCGGCGTTTGACTCCGTCCCGACATCGTAAAGGATGCGAG GTCAATGGTCTACCGACTACGGCATGCATTTACATGAGTTCGCGCGCCCC CTCCCCCGCCCGGCTCTCCGGTGCCCCATCCTTTTTGATATCCCCAAGGA CTTCATCAATTTTCGTCTGACCGGGCGCATGGTGGCCTCGGTCAACAATG CCTCGATTCGGTGGCACTACTCCACCACCCACGGATGGCCGGTGTCGCTT CTCGAGAAACTCGACCTCGCCGATCTACAGGTACAGAATGGGTTCACTAT TATAATAGCTACCGAAGAGAAAGAGAAGCGAAGATCAGAAAGTTCACAGC ACAACGGGTGTGATTGGAAGAAATGAAAAAGAAAATTGATTGTAACACTG GAAACCTTGTTTTCAGGGAAAGTCGTCGTGCTTGGCGCCATATCTACGGC CATATCGACGGAAGCACACCGCGTAACCCCTGGGCGTTTCATATAGTGGA CCTTTGGTTCGTTGCCGATGCCCGCCCGGCCAACTCAGAGCTTTGGCCAT ACACCAGACCCTTTTTTTTTTCGGTTGGGTGCTCGAAGGAAGGTAAGGTG CCTCGTGAGCCTTCTTGAGGCGGGTGTCCCGCCGTATTGTCGAACATATA TTGATATCCTTTGTCGTGACGCGTATCGTATCGTATCGTATCGTATCGCC TTCGCTCGCGGTGCGCACCTCTCCTGCGATCTCGCCTCTCTCGGCTGAAG AGCCCCGCCTGATCCACGGTGACACAGGAAGACTGTCGATTTCGTAGATG CCGTGTTTTCTTGTCTACCCAGCTCTCACGGCATGTTGTACGAAATGCCA TATGGATCGACTTTAGGAGCGGTCTCCACGTTTGGGCATTACTGTAGTTG TGCATTGCTACTACACTGCCACGCCCGAGACCTATCACAGCATGCCCTGG GTATGATACCTCCCTCCATCGTCTTTGCAAAACCCCAAGGGGAAATGGCC GCAGGAAGTGGTTGCCCTTGGCGGTGTCGTGGGCGGAATCTCCGCTGCAG CGGCGCAGCACCTGGGGCTGCCGGAAGGTCTCCCCGTCGCCCAGGGGGGC GCTGACGCGTTCGTAGGCATGGGTGAGATGGTTTTGCGATAGGGGATGAA TGTGCAGTGCTAGCTAGGGTATGATGAGCCCGGACCTATGTCGCTGGAAG AGGTAGGTACACGGTAAGTTCAATGTTTCTGCTGCTATCTGTTGTGAGGA TTGTTTACGGACACATGACCACCACCCGGGTACTTGATGTAAGCCCGCTT GATGTTTTCGTGAGCCCGCGCGACAAGCCACTCTCACCGCTACAATCACT CACTGCTCTCGTTTAGTCGTCTACCAGAACCCGCATGCAACACCACCGCC CATGCAACCAATGTATCGACGAGGCTCTTGCTGCCTGCCCCCGTCTTTCT CGTCCGACAACTTTGACCCACCTTCCTGCCGCTTGCCCCCTCGGGGTCGT CGATTGATTTAATTGGTCGGTCCATCGCCGCGGGTAGTCGGCTTGGGCGT GGTGAACAGCGGAGAGATGGCATTGCTCACGGGCTCGTCCCACCTACACC TGGGCCTCACCCACGACAGGTAGGCGCTCCTGTAGGGGAAGAAGGCGTTG GTTTTGTTTTGTTTTGGCCTGGGAGGGGCAGAAGGCATGATGTTTTATTT TGAGATGGAAAAGAAATGATCCTTGTAACGGATGGGATACGTTCGAACGG CACTCGGTTCGGTGGGTTTTGTACGAGGCAGCGGCTATTGCCAGATGCCA GGCGACGGTTGTTTTTGTCTTTTCGAGCACGATGTGTTCCCGCCGTCCCA ACTTGTTTTGATCGTGGTCGGTGCTTTGGCGCTGTAACAGCGCAACCGTG ACTTTGACCATACGCACGCCCCCCAGCCTTCTGCATTGGCATTTTTGATG TATGTTGTGCTGCTAAAAAGAAAACCTCATGTGTGTTGTATTTCCTCGTC CGTCACCCCTGCTGGTGGTACGTCAGAGTTCGACGCCGAAAGGGGTGTAG ACTGACGCTATTAATAGAATGAATGGGACGAGCACCACACACACACACAC ACCGCACACTTTTATTTTCTTGCCGCACCGAAGACTGACGTACTTTTTCA TTGGTCAGCCGGCTAGCGTGGTCGGTGCTATTGTATGTAACACACGCAAC ACACACGCACACACACCTTTGTTCTGCAGCTTGAAATATACTATACCATC TGCTTCCCCTAGAAGACCACGACCCTCCGACAGACACACACACACCCTCC GCCCCCACCTTACCACACACACCCTGTCGCAAACGGCCCCGCTGCCGCGG CGCAGGCACTTGCACGGCCCGGGCATGTGGGGCGCTTACCCCGACGCGGT GCTCCCGGGGCTGGGGGTGGTGGAGGGGGGGCAGACGTCTACCGGTAGCG CGATCGCGTGGTTCCGCCGCCTGGTCTCCGGCGGTGAGTTAGGCTGCAGA GGAGGGTTGTTGAACGTGCACGGGGTGGGGGGGGCGTACTCTTATGTTTT AGCATGCCTTAAATGATAAGGCCTTTGAAACGGATCCTCGAGAGGACGGA GGATTGTTCCCACAGGACCGATCATCGATGGCCAATCGTTCCTTCCTATT TTGCACGGGGTGGGGGGGGGTAAACGCATGCCGTAGTCGTTGGATCATTG ACCTCGCGTCCTTACGATGCCGGGAACAGGAGCGATACGCCGGGTTTTTC GCCCTCCTAGGCTGCGTTTCACAAGGATTAACGGCAGTCGTCTTTGCGTT TGCTGTGCCGGGGATGCGATAGAAGTGAATGGAGCCGTAGGGTTTCGGGG TCAAGAATATGGCAACGGAGGGAATCGTCCACGAGACAAAAGGTTGGGGG GGGGAAAGCGACCGTTCTTGAAGACCGTCTCCACACGATAAGTATCTACT GCAGCTAGCGGATGTATTTTTGCACAGTGTGTGGCCTTTTGGCCAGGAGG GCTGCCGCGAAAATCCACTCGCCATCATTCCTGTGTGGCGTGTCGGCGTG TATTTTGAGCATCTCCTTTTGCACAAACACATAGACGAACGTTTTCCTTT GCCTCGCTACCGCCCCCTTCCTCTGTCTCTCTCTCCCTCTTTCTCTCCCC CCGTGCTCGTGCCCATCGCCTTTGCTCTTACTTATGTCCCTGTTTCCGTC AACCTTCTACGGCAAGCCTAGGTGGAGAGGGGCTGGTCTCGTACAAAACG CTGAACGAGGAGGCGGAGGCCGTGCCCATCGGCTGCGAGGGGCTGGTG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9445:457..4904-

>mRNA_Ecto-sp9_F_contig9445.17597.1 ID=mRNA_Ecto-sp9_F_contig9445.17597.1|Name=mRNA_Ecto-sp9_F_contig9445.17597.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1464bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9445:457..4904- (Ectocarpus species9 EcSCA_722f female)
ATGGACATGCGATCCGCGGACTGCGCGGAGCAGGTGGCCGAGACCGGAGA
CGACGCCTTGAGGGTTAACTCCGGGGGAAGGGGCCCCGTGTCTGCGGAGT
GGATGATCCCCAAGATGGACATGCGATCCGCGGACTGCGCGGAGCAGGTG
GCCGAGACCGGAGACGACGCCTTGAGGGTTAACTCCGGGGGAAGGGGCCC
CGTGTCTGCGGAGTGGATGATCCCCAAGGCGCTCTGGCTCAAGAAAAACG
AGCCGGAGCTGTTCGCGCGCGCGCACTACGTTTGCGAATATCAGGCGCTC
TGGCTCAAGAAAAACGAGCCGGAGCTGTTCGCGCGCGCGCACTACGTTTG
CGAATATCAGGACTTCATCAATTTTCGTCTGACCGGGCGCATGGTGGCCT
CGGTCAACAATGCCTCGATTCGGTGGCACTACTCCACCACCCACGGATGG
CCGGTGTCGCTTCTCGAGAAACTCGACCTCGCCGATCTACAGGACTTCAT
CAATTTTCGTCTGACCGGGCGCATGGTGGCCTCGGTCAACAATGCCTCGA
TTCGGTGGCACTACTCCACCACCCACGGATGGCCGGTGTCGCTTCTCGAG
AAACTCGACCTCGCCGATCTACAGGGGAAATGGCCGCAGGAAGTGGTTGC
CCTTGGCGGTGTCGTGGGCGGAATCTCCGCTGCAGCGGCGCAGCACCTGG
GGCTGCCGGAAGGTCTCCCCGTCGCCCAGGGGGGCGCTGACGCGTTCGTA
GGCATGGGGGAAATGGCCGCAGGAAGTGGTTGCCCTTGGCGGTGTCGTGG
GCGGAATCTCCGCTGCAGCGGCGCAGCACCTGGGGCTGCCGGAAGGTCTC
CCCGTCGCCCAGGGGGGCGCTGACGCGTTCGTAGGCATGGTCGGCTTGGG
CGTGGTGAACAGCGGAGAGATGGCATTGCTCACGGGCTCGTCCCACCTAC
ACCTGGGCCTCACCCACGACAGTCGGCTTGGGCGTGGTGAACAGCGGAGA
GATGGCATTGCTCACGGGCTCGTCCCACCTACACCTGGGCCTCACCCACG
ACAGGCACTTGCACGGCCCGGGCATGTGGGGCGCTTACCCCGACGCGGTG
CTCCCGGGGCTGGGGGTGGTGGAGGGGGGGCAGACGTCTACCGGTAGCGC
GATCGCGTGGTTCCGCCGCCTGGTCTCCGGCGGCACTTGCACGGCCCGGG
CATGTGGGGCGCTTACCCCGACGCGGTGCTCCCGGGGCTGGGGGTGGTGG
AGGGGGGGCAGACGTCTACCGGTAGCGCGATCGCGTGGTTCCGCCGCCTG
GTCTCCGGCGGTGGAGAGGGGCTGGTCTCGTACAAAACGCTGAACGAGGA
GGCGGAGGCCGTGCCCATCGGCTGCGAGGGGCTGGTGGTGGAGAGGGGCT
GGTCTCGTACAAAACGCTGAACGAGGAGGCGGAGGCCGTGCCCATCGGCT
GCGAGGGGCTGGTG
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