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Homology
BLAST of mRNA_Ecto-sp9_F_contig9443.17596.1 vs.
Match: Novel (Sm-like protein with long N-and C-terminal domains n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK17_ECTSI) HSP 1 Score: 261 bits (668), Expect = 1.560e-84 Identity = 170/195 (87.18%), Postives = 172/195 (88.21%), Query Frame = 1
Query: 1 RSVKSWGTEGRLEGDQQIPPSDHLHACVNFRGEDIKDLHVHETAEAPAPPXXXXXXXXXXXXXXXXXXXTRVAPDVAAXXXXXXXXXXXXXXVRAAAENGDVEAEDAPGSSTMRDQGLKPGRYQPPHKNPNWKPPPTVQRGPPGXXXXXXXXXXALPGQGNHLLNRRTRXXXXXXXXXXXXFDFEAGLAKFDKEK 585
++VKSWGTEGRLEGDQQIPPSDHLHACVNFRGEDIKDLHVHETAEAPAPP XXXXXXXXXXX TRVAPDVAA VRAAAENGDVEAEDAPGSSTMRDQGLKPGRYQPPHKNPNWKPPPTVQRGPPGXXXXXXXXXXALPGQGNHLLNRRT XXXXXXXXXXXXFDFEAGLAKFDKEK
Sbjct: 37 QNVKSWGTEGRLEGDQQIPPSDHLHACVNFRGEDIKDLHVHETAEAPAPPPAAPVQXXXXXXXXXXXVATRVAPDVAAGGGAGG--------VRAAAENGDVEAEDAPGSSTMRDQGLKPGRYQPPHKNPNWKPPPTVQRGPPGXXXXXXXXXXALPGQGNHLLNRRTXXXXXXXXXXXXXFDFEAGLAKFDKEK 223
BLAST of mRNA_Ecto-sp9_F_contig9443.17596.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD7_9PHAE) HSP 1 Score: 247 bits (630), Expect = 2.880e-77 Identity = 168/195 (86.15%), Postives = 171/195 (87.69%), Query Frame = 1
Query: 1 RSVKSWGTEGRLEGDQQIPPSDHLHACVNFRGEDIKDLHVHETAEAPAPPXXXXXXXXXXXXXXXXXXXTRVAPDVAAXXXXXXXXXXXXXXVRAAAENGDVEAEDAPGSSTMRDQGLKPGRYQPPHKNPNWKPPPTVQRGPPGXXXXXXXXXXALPGQGNHLLNRRTRXXXXXXXXXXXXFDFEAGLAKFDKEK 585
++VKSWGTEGRLEGDQQIPPSDHLHACVNFRGEDIKDLHVHETAEAP PP XXXXXXXXXXXXXXXXTRVAPDVAA VRAAAENGDVEAED+PGS TMRDQGLKPGRYQPPHKNPNWKPPPTVQRGPPGXXXXXXXXXX LPGQGNHLLNRRT XXXXXXXXXXXX EAGLAKFDKEK
Sbjct: 37 QNVKSWGTEGRLEGDQQIPPSDHLHACVNFRGEDIKDLHVHETAEAPTPPPAAXXXXXXXXXXXXXXXXTRVAPDVAAGGGGAGG-------VRAAAENGDVEAEDSPGSPTMRDQGLKPGRYQPPHKNPNWKPPPTVQRGPPGXXXXXXXXXXXLPGQGNHLLNRRTXXXXXXXXXXXXXXXXEAGLAKFDKEK 224
BLAST of mRNA_Ecto-sp9_F_contig9443.17596.1 vs.
Match: Scd6-like (Sm domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C876_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 1.440e-10 Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 1
Query: 1 RSVKSWGTEGRLEGDQQIPPSDHLHACVNFRGEDIKDLHVHET-AEAPAP 147
+ VKSWGTE R+EG Q +P SD + C+ FRG+DIKDLHVH+T AEAP P
Sbjct: 38 QDVKSWGTENRVEGPQ-VPASDEIFGCIVFRGQDIKDLHVHDTPAEAPKP 86
BLAST of mRNA_Ecto-sp9_F_contig9443.17596.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pyrenochaeta sp. DS3sAY3a TaxID=765867 RepID=A0A178DLF2_9PLEO) HSP 1 Score: 58.2 bits (139), Expect = 1.530e-6 Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 4 SVKSWGTEGRLEGDQQIPPSDHLHACVNFRGEDIKDLHVHETAEAPAPP 150
+V+S+GTEGR G + PPSD ++ + FRG D+KDL + ETA+ APP
Sbjct: 37 NVRSFGTEGRKGGKDEYPPSDVVYEQIVFRGSDVKDLRIEETAKEKAPP 85
BLAST of mRNA_Ecto-sp9_F_contig9443.17596.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) TaxID=321614 RepID=Q0V4D7_PHANO) HSP 1 Score: 57.4 bits (137), Expect = 2.770e-6 Identity = 24/49 (48.98%), Postives = 36/49 (73.47%), Query Frame = 1
Query: 4 SVKSWGTEGRLEGDQQIPPSDHLHACVNFRGEDIKDLHVHETAEAPAPP 150
+V+S+GTEGR G+ + PPSD ++ + FRG D+KDL + E+A+ APP
Sbjct: 25 NVRSFGTEGRKGGNDEYPPSDVVYEQIVFRGSDVKDLRIEESAKEKAPP 73
BLAST of mRNA_Ecto-sp9_F_contig9443.17596.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ophiobolus disseminans TaxID=1469910 RepID=A0A6A6ZBU3_9PLEO) HSP 1 Score: 57.4 bits (137), Expect = 2.770e-6 Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = 1
Query: 4 SVKSWGTEGRLEGDQQIPPSDHLHACVNFRGEDIKDLHVHETAEAPAPP 150
+V+S+GTEGR G + PPSD ++ + FRG D+KDL + E+A+ APP
Sbjct: 37 NVRSFGTEGRKNGKDEYPPSDVVYEQIVFRGSDVKDLRIEESAKEKAPP 85
BLAST of mRNA_Ecto-sp9_F_contig9443.17596.1 vs.
Match: Scd6-like (Sm domain-containing protein n=1 Tax=Ampelomyces quisqualis TaxID=50730 RepID=A0A6A5QQY1_AMPQU) HSP 1 Score: 57.4 bits (137), Expect = 2.770e-6 Identity = 24/49 (48.98%), Postives = 36/49 (73.47%), Query Frame = 1
Query: 4 SVKSWGTEGRLEGDQQIPPSDHLHACVNFRGEDIKDLHVHETAEAPAPP 150
+V+S+GTEGR G+ + PPSD ++ + FRG D+KDL + E+A+ APP
Sbjct: 37 NVRSFGTEGRKGGNDEYPPSDVVYEQIVFRGSDVKDLRIEESAKEKAPP 85
BLAST of mRNA_Ecto-sp9_F_contig9443.17596.1 vs.
Match: Uncharacterized (protein n=1 Tax=Stagonospora sp. SRC1lsM3a TaxID=765868 RepID=A0A178AW65_9PLEO) HSP 1 Score: 57.4 bits (137), Expect = 3.250e-6 Identity = 24/49 (48.98%), Postives = 36/49 (73.47%), Query Frame = 1
Query: 4 SVKSWGTEGRLEGDQQIPPSDHLHACVNFRGEDIKDLHVHETAEAPAPP 150
+V+S+GTEGR G+ + PPSD ++ + FRG D+KDL + E+A+ APP
Sbjct: 1083 NVRSFGTEGRKGGNDEYPPSDVVYEQIVFRGSDVKDLRIEESAKEKAPP 1131
BLAST of mRNA_Ecto-sp9_F_contig9443.17596.1 vs.
Match: Uncharacterized (protein n=1 Tax=Lepidopterella palustris CBS 459.81 TaxID=1314670 RepID=A0A8E2EIQ7_9PEZI) HSP 1 Score: 57.0 bits (136), Expect = 3.850e-6 Identity = 26/51 (50.98%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 4 SVKSWGTEGRLEGDQQIPPSDHLHACVNFRGEDIKDLHVHETAEA--PAPP 150
+V S+GTEGR GD +IP SD+++ + FRG D+KDL + E A PAPP
Sbjct: 37 NVTSFGTEGRRNGDDEIPASDNIYEYIVFRGSDVKDLRIEEPARESKPAPP 87
BLAST of mRNA_Ecto-sp9_F_contig9443.17596.1 vs.
Match: Novel (Sm-like protein with long N-and C-terminal domains n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRU5_ECTSI) HSP 1 Score: 56.6 bits (135), Expect = 4.950e-6 Identity = 30/56 (53.57%), Postives = 38/56 (67.86%), Query Frame = 1
Query: 1 RSVKSWGTEGRLEGDQQIPPSDHLHACVNFRGEDIKDLHVHE------TAEAPAPP 150
++V+S+GTEGR+EG IPPS LH V FRG+DI DLHVH+ + AP PP
Sbjct: 42 QNVRSFGTEGRVEG-HVIPPSQVLHDFVCFRGQDIMDLHVHDAEADEGSQAAPPPP 96
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9443.17596.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 22
| Match Name | E-value | Identity | Description | |
|---|
| Novel | 1.560e-84 | 87.18 | Sm-like protein with long N-and C-terminal domains... | [more] |
| Uncharacterized | 2.880e-77 | 86.15 | protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... | [more] |
| Scd6-like | 1.440e-10 | 64.00 | Sm domain-containing protein n=1 Tax=Tribonema min... | [more] |
| Uncharacterized | 1.530e-6 | 51.02 | protein n=1 Tax=Pyrenochaeta sp. DS3sAY3a TaxID=76... | [more] |
| Uncharacterized | 2.770e-6 | 48.98 | protein n=2 Tax=Phaeosphaeria nodorum (strain SN15... | [more] |
| Uncharacterized | 2.770e-6 | 48.98 | protein n=1 Tax=Ophiobolus disseminans TaxID=14699... | [more] |
| Scd6-like | 2.770e-6 | 48.98 | Sm domain-containing protein n=1 Tax=Ampelomyces q... | [more] |
| Uncharacterized | 3.250e-6 | 48.98 | protein n=1 Tax=Stagonospora sp. SRC1lsM3a TaxID=7... | [more] |
| Uncharacterized | 3.850e-6 | 50.98 | protein n=1 Tax=Lepidopterella palustris CBS 459.8... | [more] |
| Novel | 4.950e-6 | 53.57 | Sm-like protein with long N-and C-terminal domains... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 265.0 |
| Seed ortholog evalue | 2.8e-68 |
| Seed eggNOG ortholog | 2880.D7FK17 |
| Preferred name | LSM14A |
| KEGG ko | ko:K18749 |
| GOs | GO:0000226,GO:0000242,GO:0000932,GO:0001817,GO:0001819,GO:0001959,GO:0001961,GO:0002218,GO:0002221,GO:0002252,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0002753,GO:0002757,GO:0002758,GO:0002764,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003725,GO:0003727,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0006417,GO:0006446,GO:0006950,GO:0006952,GO:0006996,GO:0007010,GO:0007017,GO:0007154,GO:0007165,GO:0008150,GO:0009605,GO:0009607,GO:0009615,GO:0009889,GO:0009890,GO:0009892,GO:0009966,GO:0009967,GO:0009987,GO:0010468,GO:0010494,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010646,GO:0010647,GO:0015630,GO:0016043,GO:0017148,GO:0017151,GO:0019222,GO:0019899,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023052,GO:0023056,GO:0030029,GO:0030036,GO:0030522,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031347,GO:0031349,GO:0031369,GO:0031370,GO:0032268,GO:0032269,GO:0032991,GO:0033962,GO:0034063,GO:0034248,GO:0034249,GO:0034622,GO:0035556,GO:0035770,GO:0036464,GO:0039528,GO:0039529,GO:0043186,GO:0043207,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0044764,GO:0045088,GO:0045089,GO:0045169,GO:0045495,GO:0045947,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051233,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051607,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0060293,GO:0060338,GO:0060340,GO:0060759,GO:0060760,GO:0065003,GO:0065007,GO:0070925,GO:0071826,GO:0071840,GO:0080090,GO:0080134,GO:0097159,GO:0098542,GO:0098586,GO:1901363,GO:1904688,GO:1904689,GO:1990124,GO:1990904,GO:2000112,GO:2000113,GO:2000765,GO:2000766 |
| EggNOG free text desc. | cytoplasmic mRNA processing body assembly |
| EggNOG OGs | KOG1073@1,KOG1073@2759 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko03019 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | Novel Sm-like protein with long N- and C-terminal domains. |
| Ec32 ortholog | Ec-18_002800.1 |
| Exons | 4 |
| Model size | 585 |
| Cds size | 585 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622931027.3151011-CDS-Ecto-sp9_F_contig9443:106..272 | 1622931027.3151011-CDS-Ecto-sp9_F_contig9443:106..272 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig9443 107..272 - |
| 1692278998.9576783-CDS-Ecto-sp9_F_contig9443:106..272 | 1692278998.9576783-CDS-Ecto-sp9_F_contig9443:106..272 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig9443 107..272 - |
| 1622931027.3661087-CDS-Ecto-sp9_F_contig9443:1599..1670 | 1622931027.3661087-CDS-Ecto-sp9_F_contig9443:1599..1670 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig9443 1600..1670 - |
| 1692278998.969381-CDS-Ecto-sp9_F_contig9443:1599..1670 | 1692278998.969381-CDS-Ecto-sp9_F_contig9443:1599..1670 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig9443 1600..1670 - |
| 1622931027.3795235-CDS-Ecto-sp9_F_contig9443:2357..2579 | 1622931027.3795235-CDS-Ecto-sp9_F_contig9443:2357..2579 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig9443 2358..2579 - |
| 1692278998.9790123-CDS-Ecto-sp9_F_contig9443:2357..2579 | 1692278998.9790123-CDS-Ecto-sp9_F_contig9443:2357..2579 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig9443 2358..2579 - |
| 1622931027.3945053-CDS-Ecto-sp9_F_contig9443:3192..3318 | 1622931027.3945053-CDS-Ecto-sp9_F_contig9443:3192..3318 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig9443 3193..3318 - |
| 1692278998.9887855-CDS-Ecto-sp9_F_contig9443:3192..3318 | 1692278998.9887855-CDS-Ecto-sp9_F_contig9443:3192..3318 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig9443 3193..3318 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9443.17596.1 >prot_Ecto-sp9_F_contig9443.17596.1 ID=prot_Ecto-sp9_F_contig9443.17596.1|Name=mRNA_Ecto-sp9_F_contig9443.17596.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=195bp
RSVKSWGTEGRLEGDQQIPPSDHLHACVNFRGEDIKDLHVHETAEAPAPP
PAAPVQPPPPPAPPVAPVATRVAPDVAAGGGGSGGGGGGAGGVRAAAENG
DVEAEDAPGSSTMRDQGLKPGRYQPPHKNPNWKPPPTVQRGPPGPGSGAG
SGTGALPGQGNHLLNRRTRGGGGGPSEAEGEFDFEAGLAKFDKEK back to topmRNA from alignment at Ecto-sp9_F_contig9443:107..3318- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp9_F_contig9443.17596.1 ID=mRNA_Ecto-sp9_F_contig9443.17596.1|Name=mRNA_Ecto-sp9_F_contig9443.17596.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3212bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9443:107..3318- (Ectocarpus species9 EcSCA_722f female)
CGTTCAGTCAAGAGCTGGGGCACGGAGGGTCGCTTGGAGGGCGATCAGCA
GATACCCCCCTCCGACCACCTTCACGCGTGCGTCAACTTCAGGGGGGAAG
ACATCAAGGACCTGCACGTGCACGAGGTGGGTCAAGACAACACTGATGTC
ACTGCTGTTGTGGGGATAAGATGCCGAAACTCTGGTGGCGGCAGTTTCTG
TGGCTGGGTATGGGGAGTGGTGGGAGAGCTGCAGACTACTGCTGTAGTTC
TTGGCCATGTTTTCCTTTTGAGTTAACTCTGATGGCGGTAGTTTCCGTGG
GCGCGTTCCCTTCGGGCCCTTCGGGTATGGGGAGTGTTGGGAGAGCTGTG
CTGCTGTAGTTCTGTGGCCAACATTTTGCTTGTGCTTGAAGTCGTGCGAA
TCAGCCACACGAGCATAACCTCATGCACTTGCAAACCCCCCCTTCCACAA
CATTGGGTGGTGTCTGATGTTGCTCGCCCTGGCTTCCGACTCTCCCCTCA
TCCACGTACACGTCATGCATGCACTCTTTGAAAAGCTAAGAACAACATCG
GCCGGAAGCAGCGGTAAACAAATAAAAATCGCTTATCGCCATCAACCAAG
CACATATTGGTCCCCTCGTCTGAGAGAAACTACAGCATCAGTAACGGCAG
CATCAGCAGAAGCAGCAGCAGCGGCAAACAAACAAAAATCACCATCACCA
ACAAACAAACACACCATCAAAATTCCCTCGGCCGCGCAGACGGCGGAGGC
ACCTGCTCCACCGCCAGCGGCACCGGTGCAGCCCCCTCCTCCTCCGGCAC
CCCCCGTGGCGCCGGTGGCAACTCGCGTAGCCCCCGACGTGGCGGCCGGC
GGCGGCGGCAGCGGCGGTGGCGGCGGCGGAGCGGGAGGAGTGAGGGCAGC
AGCGGAGAACGGAGACGTTGAGGCGGAAGACGCTCCTGGCTCTTCAACCA
TGAGGGACCAGGTAAGTTTTTATGTATGCGTACGCCGTAGCCTTGATGAG
GATGCGTGGAACTCTCGTTTCGTGTGATCTAGTGCTGTGTCGCAGTTGTG
AGCTGTCGTCGTCGTCGTCTTGGTTGGGATTTCTGCAGGGGGGGGGGTAG
ATATGTGGCGCGGTTAAATTTCTACGGTTGCAGTTTGCTCGCCTCACGAT
TCGTGGGGCATAAGAAGTGGGCTGAAAAGGCGGAAAGTGATACCGGATGG
GTAGACACGATAGGGAAAATATGTCTGAAGCCACCTTTGGCAAATTTTCT
AGCAAGGAACGATCGGCCATCGTTGATCGGTCCCGTGGGAACATTGCTCC
GTCTTCTCGAGGACGCGTGGTCACTGGTCTAACCGCTAAGGCGTGAAAAA
CATAAGAGTTCGCCCCCCCTCCCTTCACGATCACGCCCGTGTCCTATTTA
GTCGTCCACAGGCCGACAGGCTTCGCCCCAGCGTCGTAGATGGGGACGCA
ATGATGACCAATGACTTGAAGTAAGATGGCACCGGAGCGTTTTTTAATGT
GAAGACATGAGCAACAACAACGACAACAACAGCAACCATAGTTGGAGTAA
GAGCTGGGTCGTGCGTGGCGGTGTCACCAAGGAGTAAACTGCCCGTGTAC
TGACCGCATCGCCTCGCCTGCGTTGGCCCGTCCCCTCTCGTGCTGCAGGG
GCTCAAGCCCGGAAGGTACCAGCCGCCTCACAAGAATCCCAACTGGAAGC
CCCCCCCTACGGTCCAGAGGTACGTGGACGGGTACTCGCTCTCCGTGAGA
TCCCGAGATGGAAATTGGTGCGCTTGAAACCGTCAAGAAGCGGAAGCGTA
CCCCCGAGAGAGGGATATGTGCACGCGCATGCACGCTTTGCGACCAAGCA
TTTTTTTGTGTTTGGAGAAGGTGTATGTAGGTAGACCTTTGGCACCGCCT
TCTGGGTGTGTTTTTTCTTCGCCAAGGAGGGAGACTTTGAAGGGACACGT
CGACGACGCGATCGTGTTTACCGCAGGTGACGTAAGATATAATAACCACT
GGGCTGCTGTGTTTCAAAACTCGATTACTCCACAGCAGAAAGAACGGCGG
TGCCGAAAGTGGCAGCGTTGGAACGGTCTCGTCAAGAGCTTTCAGAAAAA
TCGATCGTTTCATTTTTGCGCCCTCTTCTTCGTGGAGTAATCGGGCTTTG
AAAATCGATCCAAGGGGGTGTGGTATCTTACGTTATGTTACCGACGGTCA
ATCCTGTATACCGACGGAAAAATCTAAGGGCCGTTCCGGGCGTCGTTCTG
AGGACCTTTCCTCGCGAGCTTTCCTTCAAATTCCCGCAACAAACACACCC
GTTTTACTGTTACTCCTTCTCCTAAATTCCCTTCCCACTGCTGACTAGTC
CACCGTCCACACGTCGCAATATTGCTACCCCTGTACCCCCTCCCCTCTAC
GCGACCTTCTTTCATTCCTGCCCGCGCGATCGTTCAAATTCCCGCGATTG
CAGGATTTAGGAGAAGGAATATTATCAAATATGGGCGCGTTTGTTGCGGG
AAGTTGAACGAACGAGCGGGCAGGAATGAATTTAGGAGAAGCTATATTAA
TAAAGGAGTCGTAGGTCAGAGGAGGACCAGGAAGAATGAGATAGACGTAC
TGTACGTGTTTTTGCTGTCGGCTCTCAAGGGACGCCGCAGGTACTTCGAT
CGTGCCAAGGACATCGCGATTGCGGTAGACAAGCCGTCTGCTCAAAAGCG
GTCGAGGGAGAGAAGTAGTACATACGTACGTCGGACGACTAACCAAGCCA
ATCGGAAACGGGCTTGGTAGGTGATTTGAGCGCCACATGCCATCAGATGA
ATTCCGTGCGAGTGATGCTGCACACGTGTTGTTGGAGACGGATCGCGTCC
TCGGAGTGCCCCCTTCACGTTCCCGTTCGCGACGGAAAAACACACCAGGA
CAGCGGTCCCGAAGGCCCACCTACACCCCGGTCGTTGCTCTCCTCGAACC
CCCAAAAACTAATGGTACATCATTTCCTTCTCCTTAAGTCCGTCCCTGCT
CGCGCTTTTGTTTCGTTCGTTCAAAATGTCCCGCCGCGCGTGGCAGGGGT
CCTCCGGGCCCCGGGAGCGGAGCAGGGTCGGGCACCGGCGCTCTGCCCGG
GCAGGGGAACCACCTCCTCAACAGGCGCACGCGCGGCGGGGGCGGCGGCC
CTTCGGAGGCGGAGGGGGAGTTCGACTTTGAGGCTGGCCTCGCGAAGTTC
GACAAGGAGAAG back to topCoding sequence (CDS) from alignment at Ecto-sp9_F_contig9443:107..3318- >mRNA_Ecto-sp9_F_contig9443.17596.1 ID=mRNA_Ecto-sp9_F_contig9443.17596.1|Name=mRNA_Ecto-sp9_F_contig9443.17596.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1170bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9443:107..3318- (Ectocarpus species9 EcSCA_722f female)
CGTTCAGTCAAGAGCTGGGGCACGGAGGGTCGCTTGGAGGGCGATCAGCA
GATACCCCCCTCCGACCACCTTCACGCGTGCGTCAACTTCAGGGGGGAAG
ACATCAAGGACCTGCACGTGCACGAGCGTTCAGTCAAGAGCTGGGGCACG
GAGGGTCGCTTGGAGGGCGATCAGCAGATACCCCCCTCCGACCACCTTCA
CGCGTGCGTCAACTTCAGGGGGGAAGACATCAAGGACCTGCACGTGCACG
AGACGGCGGAGGCACCTGCTCCACCGCCAGCGGCACCGGTGCAGCCCCCT
CCTCCTCCGGCACCCCCCGTGGCGCCGGTGGCAACTCGCGTAGCCCCCGA
CGTGGCGGCCGGCGGCGGCGGCAGCGGCGGTGGCGGCGGCGGAGCGGGAG
GAGTGAGGGCAGCAGCGGAGAACGGAGACGTTGAGGCGGAAGACGCTCCT
GGCTCTTCAACCATGAGGGACCAGACGGCGGAGGCACCTGCTCCACCGCC
AGCGGCACCGGTGCAGCCCCCTCCTCCTCCGGCACCCCCCGTGGCGCCGG
TGGCAACTCGCGTAGCCCCCGACGTGGCGGCCGGCGGCGGCGGCAGCGGC
GGTGGCGGCGGCGGAGCGGGAGGAGTGAGGGCAGCAGCGGAGAACGGAGA
CGTTGAGGCGGAAGACGCTCCTGGCTCTTCAACCATGAGGGACCAGGGGC
TCAAGCCCGGAAGGTACCAGCCGCCTCACAAGAATCCCAACTGGAAGCCC
CCCCCTACGGTCCAGAGGGGCTCAAGCCCGGAAGGTACCAGCCGCCTCAC
AAGAATCCCAACTGGAAGCCCCCCCCTACGGTCCAGAGGGGTCCTCCGGG
CCCCGGGAGCGGAGCAGGGTCGGGCACCGGCGCTCTGCCCGGGCAGGGGA
ACCACCTCCTCAACAGGCGCACGCGCGGCGGGGGCGGCGGCCCTTCGGAG
GCGGAGGGGGAGTTCGACTTTGAGGCTGGCCTCGCGAAGTTCGACAAGGA
GAAGGGGTCCTCCGGGCCCCGGGAGCGGAGCAGGGTCGGGCACCGGCGCT
CTGCCCGGGCAGGGGAACCACCTCCTCAACAGGCGCACGCGCGGCGGGGG
CGGCGGCCCTTCGGAGGCGGAGGGGGAGTTCGACTTTGAGGCTGGCCTCG
CGAAGTTCGACAAGGAGAAG back to top
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