prot_Ecto-sp9_F_contig9438.17584.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9438.17584.1
Unique Nameprot_Ecto-sp9_F_contig9438.17584.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length53
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9438.17584.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH5_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 9.250e-13
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 0 
Query:    1 MDYDAQPHLSGLARRGDMEGLQRAVDAGRRM 31
            MDYDAQPHLSGLARRGDMEGLQRAVD GRRM
Sbjct:    1 MDYDAQPHLSGLARRGDMEGLQRAVDTGRRM 31
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9438.17584.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAC0_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.930e-10
Identity = 29/31 (93.55%), Postives = 30/31 (96.77%), Query Frame = 0 
Query:    1 MDYDAQPHLSGLARRGDMEGLQRAVDAGRRM 31
            MDYDAQPHLSGLAR GDMEGLQRAV+AGRRM
Sbjct:  174 MDYDAQPHLSGLARTGDMEGLQRAVNAGRRM 204
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9438.17584.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized9.250e-1396.77protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.930e-1093.55protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9438contigEcto-sp9_F_contig9438:1109..3036 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9438.17584.1mRNA_Ecto-sp9_F_contig9438.17584.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9438 1109..3036 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9438.17584.1 ID=prot_Ecto-sp9_F_contig9438.17584.1|Name=mRNA_Ecto-sp9_F_contig9438.17584.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=53bp
MDYDAQPHLSGLARRGDMEGLQRAVDAGRRMVSWCHALLCNNRAVVVSLG
GG*
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