mRNA_Ecto-sp9_F_contig9410.17564.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR9_9PHAE) HSP 1 Score: 401 bits (1031), Expect = 2.020e-130 Identity = 205/209 (98.09%), Postives = 206/209 (98.56%), Query Frame = 1
Query: 28 EPPAIPLLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
EPPAIPLL SKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQ+G GVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD
Sbjct: 62 EPPAIPLLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQQGGGGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 270
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI6_ECTSI) HSP 1 Score: 353 bits (905), Expect = 8.410e-109 Identity = 188/209 (89.95%), Postives = 188/209 (89.95%), Query Frame = 1
Query: 28 EPPAIPLLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
EPPAIPLL SKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPV KTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD
Sbjct: 194 EPPAIPLLRSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPV--------------------KTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 382
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WWQ5_9STRA) HSP 1 Score: 241 bits (616), Expect = 5.910e-70 Identity = 130/207 (62.80%), Postives = 156/207 (75.36%), Query Frame = 1
Query: 37 AIPLLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRL-APTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
AI L DSFKVLTECPLIVMLLFQLYPKYI+ NIP L PLM+ L L AP L R RYKE IACQ VKTLSFLTYLLRGF+ LM+PYE+ IS +VI L+ +CP DA++TRKELLVATRHILATEFR+GFY +D +LDE++L+G G +RDTLRPLA+STLADLVHHV+ + + Q+S V+ +FS+N+HD
Sbjct: 228 AISALQGLDSFKVLTECPLIVMLLFQLYPKYIQENIPLLTPLMMGGLALHAPILAHKLQ-------RNRYKEFIACQ------VKTLSFLTYLLRGFSELMKPYEEAISKAVITLMIACPGDAISTRKELLVATRHILATEFRRGFYQHIDTLLDENVLIGVGHPSRDTLRPLAFSTLADLVHHVRAELSISQLSCVVLLFSRNLHD 421
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHH3_AURAN) HSP 1 Score: 241 bits (616), Expect = 5.960e-70 Identity = 129/203 (63.55%), Postives = 154/203 (75.86%), Query Frame = 1
Query: 46 LLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
+L DSFKVLTECPLIVMLLFQLYPKYI+ NIP L PLM+ L L L R RY+E +ACQ VKTLSFLTYLLRGF+ LM+PYE+ IS +VI L+ +CP DAVATRKELLVATRHILATEFR+GFY VD +LDE +L+G GR +RD LRPLA+STLADLVHHV+ ++L Q+SRV+ +FS+N+HD
Sbjct: 922 VLQGLDSFKVLTECPLIVMLLFQLYPKYIQDNIPLLTPLMMGGLALRAPLAAYK------LQRERYREFVACQ------VKTLSFLTYLLRGFSELMKPYEEAISKAVIALMIACPGDAVATRKELLVATRHILATEFRRGFYRHVDTLLDEKVLIGLGRPSRDALRPLAFSTLADLVHHVRAELNLSQLSRVVLLFSRNLHD 1112
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DVY0_9EUKA) HSP 1 Score: 212 bits (540), Expect = 1.010e-62 Identity = 114/203 (56.16%), Postives = 146/203 (71.92%), Query Frame = 1
Query: 46 LLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
L S +SFKVLTECPLIVMLLFQLYP+Y++ NI LIPLM+ AL + P Y + IA Q VKTLSFLTY+LRGF MQP++ +S VI LL +CP+ ++ +RKELLVATRHILAT FRKGF+++++ ML ED+L+G GR A + +RPLAYSTLADLVHHV+ + +DQ+S+VI +FS+NIHD
Sbjct: 52 LCKSVESFKVLTECPLIVMLLFQLYPRYVEQNIHHLIPLMMRALNIQPPTNLTQQH------SQLYSDFIAAQ------VKTLSFLTYVLRGFADRMQPHQDNLSKCVIQLLLNCPTSSINSRKELLVATRHILATNFRKGFFNKLNMMLKEDVLIGQGR-AHEIVRPLAYSTLADLVHHVRADLSIDQLSKVIYIFSRNIHD 241
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MWT5_9CHLO) HSP 1 Score: 196 bits (498), Expect = 2.710e-60 Identity = 104/200 (52.00%), Postives = 143/200 (71.50%), Query Frame = 1
Query: 55 SKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLA-PTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIH 651
S+ SFKV+ ECPLIVM LFQLYP+ I+ N P L+PLM++ + ++ P L G +P L+A + ++ A Q VKT+SFLTY+LR F + ++ I+ SV++LLR+CP D V+TRKELLVATRH++AT+FRKGF+ V +LDE +LVG GR LRPLAYS LA+L+HHV+ + L Q+SRVI +FS+N+H
Sbjct: 2 SRCSFKVVIECPLIVMFLFQLYPRNIQHNTPRLLPLMVETISISGPPL-----GHIPAHLKATHADLKAAQ------VKTMSFLTYMLRSFADHFRSHQDSIAGSVVDLLRTCP-DIVSTRKELLVATRHVIATDFRKGFHGYVATLLDEQVLVGSGRACHQALRPLAYSLLAELIHHVRTELSLQQLSRVIYLFSRNVH 189
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Phosphatidylinositol (3-and 4-kinase family protein with FAT domain n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I709_KLENI) HSP 1 Score: 211 bits (538), Expect = 1.780e-59 Identity = 111/208 (53.37%), Postives = 152/208 (73.08%), Query Frame = 1
Query: 31 PPAIPLLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
PP L PS SFKV+TECPLIVM LFQLYP+++ NIP L+PLM+ + + G + V P L+ + ++ A Q VKT+SF+TYLLR F+ ++PY + +S S++NLL +CP D++ATRKELLVATRH+LAT+FRKGF++ +D +LDE +LVG GR +TLRPLAYS LA+L+HHV+ + L Q+SR+I +FSKN+HD
Sbjct: 249 PPLGQLNPSVRSFKVVTECPLIVMFLFQLYPRFLGVNIPTLLPLMVTTISIP-----GPNNV-PPHLKQTFSDLKAAQ------VKTVSFMTYLLRSFSDDIRPYTENVSKSIVNLLVTCP-DSIATRKELLVATRHVLATDFRKGFFTHIDILLDERVLVGTGRSCYETLRPLAYSLLAELIHHVRIDLSLQQLSRIIYLFSKNVHD 443
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Uncharacterized (protein n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XKQ8_MARPO) HSP 1 Score: 209 bits (532), Expect = 1.140e-58 Identity = 108/203 (53.20%), Postives = 150/203 (73.89%), Query Frame = 1
Query: 46 LLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
L PS SFKV+TECPLIVM LFQLYP+Y++ NIP L+PLM++A+ + Q +P L+ + E+ Q VKT+SFLTYLL+ F ++ +E+ IS S++NLL SCP D+V+ RKELLVATRH+LAT+FR+GF+S++D +LDE +LVG GR +TLRPLAYS LA+L+HHV+ + L Q+SR++ +FS+N+HD
Sbjct: 192 LNPSTRSFKVVTECPLIVMFLFQLYPRYLQTNIPLLLPLMVNAISITGPSQ------VPTNLKNAFAELKGAQ------VKTVSFLTYLLKSFADCIRSHEESISKSIVNLLVSCP-DSVSIRKELLVATRHVLATDFRRGFFSQIDTLLDERVLVGTGRACYETLRPLAYSLLAELIHHVRLDLSLPQLSRIVYLFSRNVHD 381
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: FAT (domain-containing protein n=4 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CBB9_DIALT) HSP 1 Score: 208 bits (529), Expect = 2.890e-58 Identity = 115/211 (54.50%), Postives = 147/211 (69.67%), Query Frame = 1
Query: 37 AIPLLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQRGSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVG----PG-RQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
A+ L S +SFKVLTECPLIVMLLFQLYP YI+A IP+LIPLM+ AL L G P R +Y + +A Q VKTLSFLTYLLR F M Y++ I VI LL + P+D+ + RK++L+ATRHILAT+FR GF+S VD +L+E+LL+G PG R + + LRPLA STLADLVHHV+ + + Q+SRV+ +F+KNIHD
Sbjct: 447 AVRLTKSTESFKVLTECPLIVMLLFQLYPSYIQATIPELIPLMVSALALRA-------GPPPPAQRVQYADCMAAQ------VKTLSFLTYLLRAFADFMSSYQESIPKCVIQLLHAAPADSASIRKDVLIATRHILATDFRTGFFSHVDALLNEELLLGGRVSPGSRSSHEALRPLACSTLADLVHHVRGALSMGQLSRVVHLFAKNIHD 644
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Match: Uncharacterized (protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HAR4_SPIPD) HSP 1 Score: 206 bits (525), Expect = 9.870e-58 Identity = 109/224 (48.66%), Postives = 151/224 (67.41%), Query Frame = 1
Query: 1 GTAAAAAAAEPPAIPLLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDLIPLMIDALRLAPTLQR------GSDGVLPVCLRARYKEMIACQARDCFMVKTLSFLTYLLRGFTPLMQPYEKQISSSVINLLRSCPSDAVATRKELLVATRHILATEFRKGFYSEVDRMLDEDLLVGPGRQARDTLRPLAYSTLADLVHHVKDRIDLDQVSRVIQVFSKNIHD 654
G+ A + + EP L S SFKVLTECP+I+ LLFQLY KY+ AN+P +PL+I L L P QR + GV+ V + A + A VKT+SF+ Y+LR F P+++PY++QI+ +V+ L+RSCP DA ATRKELLVATRHI T+FR F VD +L+ED+LVG G A++TLRP+A+S L DL+HHV+ + + Q+SR I ++S+N+HD
Sbjct: 186 GSPAQSDSGEPSTRVLQKSLYSFKVLTECPIIIALLFQLYRKYVNANVPVFVPLIIHCLTLLPAQQRQELADADAAGVVYVGISANVRNRAALTDFIMLQVKTVSFIAYILRSFVPILKPYQQQIADAVVVLMRSCPPDAAATRKELLVATRHIWYTDFRHAFVKHVDILLNEDVLVGSGVTAKETLRPIAHSVLVDLIHHVRADLSIAQLSRAIHMYSRNLHD 409 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9410.17564.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9410.17564.1 >prot_Ecto-sp9_F_contig9410.17564.1 ID=prot_Ecto-sp9_F_contig9410.17564.1|Name=mRNA_Ecto-sp9_F_contig9410.17564.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=218bp GTAAAAAAAEPPAIPLLPSKDSFKVLTECPLIVMLLFQLYPKYIKANIPDback to top mRNA from alignment at Ecto-sp9_F_contig9410:2108..4692- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9410.17564.1 ID=mRNA_Ecto-sp9_F_contig9410.17564.1|Name=mRNA_Ecto-sp9_F_contig9410.17564.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2585bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9410:2108..4692- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9410:2108..4692- >mRNA_Ecto-sp9_F_contig9410.17564.1 ID=mRNA_Ecto-sp9_F_contig9410.17564.1|Name=mRNA_Ecto-sp9_F_contig9410.17564.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1308bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9410:2108..4692- (Ectocarpus species9 EcSCA_722f female)back to top |