prot_Ecto-sp9_F_contig939.17545.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig939.17545.1
Unique Nameprot_Ecto-sp9_F_contig939.17545.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length199
Homology
BLAST of mRNA_Ecto-sp9_F_contig939.17545.1 vs.
Match: 60S (ribosomal protein L13a n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6W9_ECTSI)

HSP 1 Score: 388 bits (997), Expect = 2.030e-136
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
Query:    1 MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAELIKRLEAQRKIKSEAYYVDKKAAKQLKDKATAEANLAAVAPVLEEYGF 198
            MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAELIKRLEAQRKIKSEAYYVDKKAAKQLKDKATAEANLAAVAPVLEEYGF
Sbjct:    1 MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAELIKRLEAQRKIKSEAYYVDKKAAKQLKDKATAEANLAAVAPVLEEYGF 198          
BLAST of mRNA_Ecto-sp9_F_contig939.17545.1 vs.
Match: 60S (ribosomal protein L13a n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9N1_9STRA)

HSP 1 Score: 286 bits (732), Expect = 5.060e-96
Identity = 142/197 (72.08%), Postives = 169/197 (85.79%), Query Frame = 0
Query:    1 MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAELIKRLEAQRKIKSEAYYVDKKAAKQLKDKATAEANLAAVAPVLEEYG 197
            + E PV VDGRGHLLGRLAS+VAK+LL GQKV+VVR EQI ISGSLVRNKVKY Q++KKR NTNP RGP+HFRSPARIFWRT+RGM+P KT RG+ A+ARL  FEGIPAP+DK+KRMVVP AL+V+R+APGR+ CVLGRLS EVGW H +L++RLEA+RK++SEA+Y  KKA  QL+ KA A A+L+AV PVLE YG
Sbjct:    2 VLEKPVVVDGRGHLLGRLASIVAKQLLSGQKVIVVRAEQIVISGSLVRNKVKYAQFRKKRMNTNPARGPFHFRSPARIFWRTIRGMIPHKTHRGQLAMARLKAFEGIPAPFDKQKRMVVPAALKVLRLAPGRKHCVLGRLSTEVGWRHGDLVERLEAKRKVRSEAFYQKKKANAQLRVKAEAAADLSAVTPVLESYG 198          
BLAST of mRNA_Ecto-sp9_F_contig939.17545.1 vs.
Match: 60S (ribosomal protein L13a n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3W8_PORPP)

HSP 1 Score: 256 bits (653), Expect = 5.150e-84
Identity = 128/197 (64.97%), Postives = 155/197 (78.68%), Query Frame = 0
Query:    1 MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAELIKRLEAQRKIKSEAYYVDKKAAKQLKDKATAEANLAAVAPVLEEYG 197
            M+E+ V VD R HLLGRLAS+VAKELL GQKVVV RCE I +SG  +R K KY+ + +KR NTNP RGP+HFR+P+RIFWRTVRGMLP KT RG+EAL RL  FEGIP PYDK KRMVVP+AL+V+R+AP R+ CVLGRLS EVGW + +++ RLE +RK+ S AYY  KKA  +LK KAT  A+L+ V PVLE +G
Sbjct:    1 MYESVVVVDARAHLLGRLASIVAKELLCGQKVVVTRCEAIEMSGRFIRKKNKYLMFLRKRMNTNPSRGPFHFRAPSRIFWRTVRGMLPHKTERGQEALGRLKVFEGIPPPYDKMKRMVVPDALRVVRLAPRRKHCVLGRLSHEVGWKYQDVLARLETKRKVHSAAYYQRKKALDKLKRKATESADLSKVTPVLEAFG 197          
BLAST of mRNA_Ecto-sp9_F_contig939.17545.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3B4_AURAN)

HSP 1 Score: 254 bits (650), Expect = 1.520e-83
Identity = 128/197 (64.97%), Postives = 156/197 (79.19%), Query Frame = 0
Query:    1 MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAELIKRLEAQRKIKSEAYYVDKKAAKQLKDKATAEANLAAVAPVLEEYG 197
            +F+  V VDGR H+LGRLAS++AKELL GQKVVVVRCEQ+ +SGSLVRNKVK+  + KKR NTNPKRGP H+RSPAR+ WRTVRGMLP KT RG++ALARL CFEG+P PYDK K+MVVP AL+V+R+ PGRRF VL RL+ E GW H  LI ++E +R  +S  +Y  KK+A  LK KATA A+L+ VA VLE +G
Sbjct:    2 VFQDSVLVDGRTHMLGRLASIIAKELLCGQKVVVVRCEQLCVSGSLVRNKVKFTAFLKKRTNTNPKRGPIHYRSPARMLWRTVRGMLPHKTHRGQQALARLQCFEGVPPPYDKMKKMVVPEALKVLRLKPGRRFTVLARLASEFGWKHEALIAKMEEKRVARSAEFYAAKKSATALKAKATAAADLSKVADVLEAFG 198          
BLAST of mRNA_Ecto-sp9_F_contig939.17545.1 vs.
Match: Hypothetical (protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TDT8_9RHOD)

HSP 1 Score: 254 bits (648), Expect = 2.970e-83
Identity = 126/198 (63.64%), Postives = 155/198 (78.28%), Query Frame = 0
Query:    1 MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAELIKRLEAQRKIKSEAYYVDKKAAKQLKDKATAEANLAAVAPVLEEYGF 198
            MF  PV VDGRGHLLGRLAS VAKELL GQ+VVVVRCE I  SG  +RNK KY+ + +KR NTNP RGP HFRSP+++FWRTVRGMLP KT RG +ALARL  FEGIPAPYDK KRMVVPNAL+V+R+ P R++C LGR++ EVGW +A+++ RLEA+RK+ SEAYY  KKA  +L+ +A A A +  +   L+ YG+
Sbjct:    1 MFSGPVVVDGRGHLLGRLASTVAKELLNGQQVVVVRCEDIDQSGKFIRNKNKYLIFLRKRMNTNPTRGPIHFRSPSKMFWRTVRGMLPHKTQRGADALARLKVFEGIPAPYDKTKRMVVPNALRVLRLRPDRKYCRLGRIASEVGWKYADVVDRLEAKRKVSSEAYYEKKKAEGKLRVQAKANAAIQEMETKLQNYGY 198          
BLAST of mRNA_Ecto-sp9_F_contig939.17545.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQI9_9STRA)

HSP 1 Score: 254 bits (648), Expect = 3.070e-83
Identity = 128/199 (64.32%), Postives = 160/199 (80.40%), Query Frame = 0
Query:    1 MFEAPVT-VDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAELIKRLEAQRKIKSEAYYVDKKAAKQLKDKATAEANLAAVAPVLEEYGF 198
            MF    T +D RGHLLGRLAS++AKELL GQKV VVRCE+I ++GSL+RNKVK+  Y++KRH TNPK+GP H+RSPAR+ WR VRGMLP KTARG+ ALARL+ FEGIPAPYDKKKR+VVP AL+V+R+ PGR+F VL  L+ EVGW H +LI+RLE +RK++++A+Y  KKAA   K  ATA  +L+AV PVLE  G+
Sbjct:    1 MFSPNATLIDARGHLLGRLASIIAKELLCGQKVTVVRCEEICVTGSLLRNKVKWANYRRKRHLTNPKKGPIHYRSPARMLWRVVRGMLPHKTARGQAALARLATFEGIPAPYDKKKRVVVPEALKVLRLQPGRKFTVLKTLANEVGWKHKDLIERLENKRKLEAQAFYEKKKAAAAQKRAATAAVDLSAVTPVLEANGY 199          
BLAST of mRNA_Ecto-sp9_F_contig939.17545.1 vs.
Match: 60s (ribosomal protein l13a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSL6_9STRA)

HSP 1 Score: 254 bits (649), Expect = 3.460e-83
Identity = 128/196 (65.31%), Postives = 158/196 (80.61%), Query Frame = 0
Query:    6 VTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAELIKRLEAQRKIKSEAYYVDKKA---AKQLKDKATAEANLAAVAPVLEEYGF 198
            V +DGRGHLLGRL+S+VAKELL GQKVVVVRCE++ ISG LVRN  +YMQ+ +KR NTNPKRGP+H+R+P+RI WRT+RGMLP KT RG +ALARL+ FEGIPAPYD KKR+VVP AL+++R+ PGRRFC L RL+ EVGW H +L+ RLEA+RKIK+EAYY  KKA   AK L ++  A   L+AV  VL  +G+
Sbjct:    8 VVIDGRGHLLGRLSSIVAKELLSGQKVVVVRCEELMISGGLVRNHTRYMQFLRKRTNTNPKRGPFHYRAPSRILWRTIRGMLPHKTFRGAQALARLTTFEGIPAPYDTKKRVVVPQALKILRLKPGRRFCTLSRLAHEVGWGHRDLVARLEAKRKIKAEAYYQQKKAGTAAKALAERKAAS-ELSAVNNVLAGFGY 202          
BLAST of mRNA_Ecto-sp9_F_contig939.17545.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LS12_9EUKA)

HSP 1 Score: 253 bits (647), Expect = 3.680e-83
Identity = 125/183 (68.31%), Postives = 151/183 (82.51%), Query Frame = 0
Query:    6 VTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAELIKRLEAQRKIKSEAYYVDKKAAKQLKDKATAEANLAA 188
            V +DG+GHLLGRL S++AK+LL G+KVVVVRCE + ISGSL RNKVKY Q+ KKR NTNP RGP+HFRSPARIFWRT+RGMLP KT RG+ ALARL+CFEGIP PYDKKKR+VVP+AL+ +R+   R F VLG LS+EVGW + +L+ +LEAQRKIK +AYY +KKA   LK KA A A+L+A
Sbjct:   12 VVIDGKGHLLGRLCSIIAKQLLFGKKVVVVRCEALIISGSLTRNKVKYAQFMKKRMNTNPNRGPFHFRSPARIFWRTLRGMLPHKTVRGQSALARLACFEGIPEPYDKKKRVVVPSALKSLRLRADRNFTVLGELSKEVGWGYTDLVAKLEAQRKIKEQAYYAEKKAQVALKSKAAASADLSA 194          
BLAST of mRNA_Ecto-sp9_F_contig939.17545.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NQ00_HETAK)

HSP 1 Score: 252 bits (643), Expect = 1.710e-82
Identity = 132/198 (66.67%), Postives = 157/198 (79.29%), Query Frame = 0
Query:    1 MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAELIKRLEAQRKIKSEAYYVDKKAAKQLKDKATAEANLAAVAPVLEEYGF 198
            MFE  V VDGRGHLLGRLAS+VAK+LL GQKVV+VR E+I +SGSL+R K ++ Q+ KKR NTNPKRGP HFRSPA+IFWRTVRGM+P KT RG  A+ARL CFEGIP P+DKKKRMVVP AL+V+R+   R+   LG L+ EVGW  A LI+RLEA+RKI+S+AYY+ KKAA  LK KA AEA+L+ VA VL   G 
Sbjct:    1 MFEDTVVVDGRGHLLGRLASIVAKQLLCGQKVVLVRAEEIVMSGSLIRKKTQFAQWLKKRTNTNPKRGPIHFRSPAKIFWRTVRGMIPHKTVRGTAAMARLQCFEGIPHPWDKKKRMVVPEALKVLRLKAHRKNTKLGTLAGEVGWEKAGLIERLEAKRKIRSQAYYLKKKAAVVLKTKAAAEADLSPVAAVLAPLGM 198          
BLAST of mRNA_Ecto-sp9_F_contig939.17545.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2DZL3_9STRA)

HSP 1 Score: 251 bits (642), Expect = 2.590e-82
Identity = 128/200 (64.00%), Postives = 157/200 (78.50%), Query Frame = 0
Query:    1 MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNKVKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALARLSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAELIKRLEAQRKIKSEAYYVDKKAAKQLKDKA--TAEANLAAVAPVLEEYGF 198
            M E  + VDGR HLLGRLASVVAKELL GQKVV+VRC+Q+ ISGSLVRNKVKY Q++KKR NTNP +GPYHF+SPA++ WRT+RGM  +KTARG+EALARLS FEGIP PYDKKKR V+P AL+V+R+ P R + VLG L+  VGW H +L+KRLE +RK+++ A+Y  KKA  QL++KA   A   LA V  VLE  G+
Sbjct:    1 MLENTIIVDGRDHLLGRLASVVAKELLSGQKVVIVRCDQVCISGSLVRNKVKYAQFRKKRMNTNPSKGPYHFKSPAKMVWRTIRGMCHQKTARGQEALARLSTFEGIPHPYDKKKRQVIPAALRVMRLKPSRNYTVLGELANAVGWKHQDLLKRLEDKRKVRAAAFYEKKKAKTQLREKAEKAAAGELAKVNEVLEASGY 200          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig939.17545.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
60S2.030e-136100.00ribosomal protein L13a n=2 Tax=Ectocarpus TaxID=28... [more]
60S5.060e-9672.08ribosomal protein L13a n=1 Tax=Tribonema minus Tax... [more]
60S5.150e-8464.97ribosomal protein L13a n=1 Tax=Porphyridium purpur... [more]
Uncharacterized1.520e-8364.97protein n=1 Tax=Aureococcus anophagefferens TaxID=... [more]
Hypothetical2.970e-8363.64protein n=1 Tax=Compsopogon caeruleus TaxID=31354 ... [more]
Hypothetical3.070e-8364.32protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
60s3.460e-8365.31ribosomal protein l13a n=1 Tax=Nannochloropsis gad... [more]
Hypothetical3.680e-8368.31protein (Fragment) n=1 Tax=Coccolithus braarudii T... [more]
Hypothetical1.710e-8266.67protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical2.590e-8264.00protein n=1 Tax=Helicotheca tamesis TaxID=374047 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036899Ribosomal protein L13 superfamilyGENE3D3.90.1180.10coord: 1..148
e-value: 1.1E-67
score: 228.5
IPR036899Ribosomal protein L13 superfamilySUPERFAMILY52161Ribosomal protein L13coord: 7..147
IPR005822Ribosomal protein L13PFAMPF00572Ribosomal_L13coord: 7..115
e-value: 7.9E-10
score: 39.1
IPR005822Ribosomal protein L13PIRSFPIRSF002181RPL13p_RPL13Aa_RPL16e_RPL13ocoord: 3..160
e-value: 8.8E-43
score: 143.8
IPR005822Ribosomal protein L13PANTHERPTHR11545RIBOSOMAL PROTEIN L13coord: 6..197
IPR005822Ribosomal protein L13HAMAPMF_01366Ribosomal_L13coord: 5..138
score: 20.049
IPR005755Ribosomal protein L13, eukaryotic/archaealTIGRFAMTIGR01077TIGR01077coord: 7..146
e-value: 1.3E-53
score: 179.1
IPR005755Ribosomal protein L13, eukaryotic/archaealPANTHERPTHR11545:SF3RIBOSOMAL PROTEIN L13Acoord: 6..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig939contigEcto-sp9_F_contig939:882..5167 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig939.17545.1mRNA_Ecto-sp9_F_contig939.17545.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig939 238..5167 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig939.17545.1 ID=prot_Ecto-sp9_F_contig939.17545.1|Name=mRNA_Ecto-sp9_F_contig939.17545.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=199bp
MFEAPVTVDGRGHLLGRLASVVAKELLGGQKVVVVRCEQITISGSLVRNK
VKYMQYKKKRHNTNPKRGPYHFRSPARIFWRTVRGMLPRKTARGEEALAR
LSCFEGIPAPYDKKKRMVVPNALQVIRMAPGRRFCVLGRLSEEVGWPHAE
LIKRLEAQRKIKSEAYYVDKKAAKQLKDKATAEANLAAVAPVLEEYGF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036899Ribosomal_L13_sf
IPR005822Ribosomal_L13
IPR005755Ribosomal_L13_euk/arc