prot_Ecto-sp9_F_contig9369.17529.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9369.17529.1
Unique Nameprot_Ecto-sp9_F_contig9369.17529.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length164
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9369.17529.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM8_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 7.370e-111
Identity = 153/163 (93.87%), Postives = 156/163 (95.71%), Query Frame = 0 
Query:    1 QARLCIVLSIVIHTISLFVEGWYWPWQRNAAFGVFAVGGLVLCIYDQYMYAIGGIGFAVCALFDLFAVLRWITDDDNIVEGDDSFDGSSEGTTALWYALPPFLGAITMGLGAIFSFTAVFFWEDGDGTAMSDESKAVELGLAPLAAHPGAPPRAYYPQSPHPV 163
            +ARLCI LSIVIHTISLFVEGWYWPWQRNAAFGVFAVGGLVLCIYDQYMYAIGG+GFAVCALFDLFAVLRWITDDDNIVEGDDSFDGSSEGTTALWYALPP LGAITMGLGAIFSFTAVFFWEDGD TAM  E K VELGLAP+AAHPGAPPRAYYPQSPHPV
Sbjct:   13 KARLCIALSIVIHTISLFVEGWYWPWQRNAAFGVFAVGGLVLCIYDQYMYAIGGVGFAVCALFDLFAVLRWITDDDNIVEGDDSFDGSSEGTTALWYALPPLLGAITMGLGAIFSFTAVFFWEDGDCTAMPHEGKTVELGLAPIAAHPGAPPRAYYPQSPHPV 175
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9369.17529.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS2_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 1.090e-52
Identity = 91/180 (50.56%), Postives = 113/180 (62.78%), Query Frame = 0 
Query:    2 ARLCIVLSIVIHTISLFVEGWYWPWQRNAAFGVFAVGGLVLCIYDQYMYAIGGIGFAVCALFDLFAVLRWITDDDNIVEGDDSF-----------DGSSEGTTALWYALPPFLGAITMGLGAIFSFTAVFFWEDGDGTAM-------------------SDESKAVELGLAPLAAHPGAP 151
            AR C +LSIVIH IS ++ G ++ WQRNA F  F +GGL+LC Y++YMY IG +GFA+CA+FD+ AVLRWIT DD I + DD +           + SS+ T  LW A+PPFLGAI MGLGAIF+FTA+F W+ G GTA+                     ESK  ELGLAP  AHP  P
Sbjct:   39 ARGCAILSIVIHAISFYLGGGFFVWQRNACFIAFVMGGLLLCFYERYMYVIGSLGFALCAVFDVLAVLRWITRDDEIFDSDDDYNTTFQVDDTQSEESSDSTILLWLAVPPFLGAIAMGLGAIFTFTAIFAWKYGGGTAIPHVPVAPQPTFDFTKQPQSQQESKTAELGLAPPTAHPRTP 218
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9369.17529.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAL4_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 1.400e-28
Identity = 68/178 (38.20%), Postives = 97/178 (54.49%), Query Frame = 0 
Query:    1 QARLCIVLSIVIHTISLFVEGWYWPWQRNAAFGVFAVGGLVLCIYDQYMYAIGGIGFAVCALFDLFAVLRWITDDDNIVEGDDSF-----------DGSSEG--TTALWYALPPFLGAITMGLGAIFSFTAVFFWEDGDGTAMSDESKAVELGLAPLAAHPGAPPRA----YYPQSPH 161
            QAR C + +I++H  +L V GW W WQ  A+   F + G++LC+YD+  Y  GGI FAV A+FD+  ++ WI   +N+   DD +           DG  E      LW+AL PFLGA+++GLGA+FSFT++ FW+D    A +         +A   AH  AP       Y PQ+ H
Sbjct:    8 QARACAICAIIVHVGALLVFGWLWVWQWIASVLAFIMCGVLLCMYDRCAYITGGICFAVAAVFDILVLVGWIAIYNNLQ--DDYYXXXXXXXXXXXDGEWEDWKNVILWFALLPFLGALSLGLGAVFSFTSLCFWKDAGSPAAA---------MAVTTAHVPAPQNTVSATYQPQNEH 174
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9369.17529.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized7.370e-11193.87protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM8... [more]
Uncharacterized1.090e-5250.56protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.400e-2838.20protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 5..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..73
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 74..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 123..163
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..122
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..4
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 5..24
NoneNo IPR availableTMHMMTMhelixcoord: 92..114
NoneNo IPR availableTMHMMTMhelixcoord: 28..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9369contigEcto-sp9_F_contig9369:2304..4162 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9369.17529.1mRNA_Ecto-sp9_F_contig9369.17529.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9369 2304..4162 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9369.17529.1 ID=prot_Ecto-sp9_F_contig9369.17529.1|Name=mRNA_Ecto-sp9_F_contig9369.17529.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=164bp
QARLCIVLSIVIHTISLFVEGWYWPWQRNAAFGVFAVGGLVLCIYDQYMY
AIGGIGFAVCALFDLFAVLRWITDDDNIVEGDDSFDGSSEGTTALWYALP
PFLGAITMGLGAIFSFTAVFFWEDGDGTAMSDESKAVELGLAPLAAHPGA
PPRAYYPQSPHPV*
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