prot_Ecto-sp9_F_contig9362.17527.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig9362.17527.1
Unique Name	prot_Ecto-sp9_F_contig9362.17527.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	431

Homology

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9362.17527.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ7_9PHAE)

HSP 1 Score: 443 bits (1140), Expect = 1.620e-140
Identity = 309/380 (81.32%), Postives = 313/380 (82.37%), Query Frame = 0

Query:   51 SWKGGXSGSGTLARAASRGSLPAAXXXXXXXXTGAGPQGGVGGVDDAAPWEAAGSGGEGEKGARDEPRSLTDLLEDLRQARAIADSRGRQLKEAHSMWEAGEASRQKAEAELSLVSSELDLLRPFSKSLAARAEGKEAAEEAAGNLASEVETLREQLAAAVESAEKLGSRAGTAEDEAGASASKLSGLEKVVRRLGGXXEVAHSELAKERAGAEEAVARASKAERELDQARARAAVLDNKLATLEKDKLELLADANSSRARASALEEKYSAAKAAEAAESXXXXXXXXXXXXXXXXENLEAVSRMEEALAKEAAAEERADKAVKMEEDTRAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEAIVTK 430
            SWKGG  GSGTLARAASRGS PAA                                     GA DEPRSLTDLLEDLRQARAIAD RGRQLKEAHSMWEAGEASRQKAEAELSLVSSELDLLRPFSKSLAARAEGKEAAEEAAGNLASEVETLREQLAAAVESAE+LGSRAGTAEDEAGASASKLSGLE        XX VAHSELAKERAGAEEAVARASKAERELDQARARAAVL+NKLATLEKDKLELLADANSSRARASALEEKYSAA+AAEAAESXXXXXXXXXXXXXXX ENL+AV               RADKAVKMEEDTRAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEAIVTK
Sbjct:  895 SWKGG--GSGTLARAASRGSFPAA-------------------------------------GAGDEPRSLTDLLEDLRQARAIADYRGRQLKEAHSMWEAGEASRQKAEAELSLVSSELDLLRPFSKSLAARAEGKEAAEEAAGNLASEVETLREQLAAAVESAERLGSRAGTAEDEAGASASKLSGLEXXXXXXXXXXXVAHSELAKERAGAEEAVARASKAERELDQARARAAVLENKLATLEKDKLELLADANSSRARASALEEKYSAARAAEAAESXXXXXXXXXXXXXXXSENLKAVXXXXXXXXXXXXXXXRADKAVKMEEDTRAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEAIVTK 1235

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9362.17527.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ2_ECTSI)

HSP 1 Score: 343 bits (880), Expect = 3.990e-112
Identity = 239/269 (88.85%), Postives = 242/269 (89.96%), Query Frame = 0

Query:  162 LSLVSSELDLLRPFSKSLAARAEGKEAAEEAAGNLASEVETLREQLAAAVESAEKLGSRAGTAEDEAGASASKLSGLEKVVRRLGGXXEVAHSELAKERAGAEEAVARASKAERELDQARARAAVLDNKLATLEKDKLELLADANSSRARASALEEKYSAAKAAEAAESXXXXXXXXXXXXXXXXENLEAVSRMEEALAKEAAAEERADKAVKMEEDTRAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEAIVTK 430
            LSLVSSELDLLRPFSKSLAARAEGKEAAEEAAGNLA+EVETLREQLAAAVESAE+LGSRAGTAEDEAGASASKLSGLEKVVRR   XXEVAHSELAKERAGAEEA ARASKAERELDQARARAAVLDNKLATLEKDKLELLADANSSRARASALEEKYSAA+AAEA ES XXXXXXXXXXXXXXX                     RADKAVKMEEDTRAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEAIVTK
Sbjct:    8 LSLVSSELDLLRPFSKSLAARAEGKEAAEEAAGNLATEVETLREQLAAAVESAERLGSRAGTAEDEAGASASKLSGLEKVVRRXXXXXEVAHSELAKERAGAEEAAARASKAERELDQARARAAVLDNKLATLEKDKLELLADANSSRARASALEEKYSAARAAEAVESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRADKAVKMEEDTRAEMAGKTEEVMRLTAQRNSAKSRADSLAKDLSRVCGGGRTLDQIEAIVTK 276

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9362.17527.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ4_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 3.750e-21
Identity = 84/106 (79.25%), Postives = 84/106 (79.25%), Query Frame = 0

Query:   17 GEEADTDTGEESAADGETGRGXXXXXXXXXXXXX-SWKGGXSGSGTLARAASRGSLPAAXXXXXXXXTG--AGPQGGVGGVDDAAPWEAAGSGGEGEKGARDEPRS 119
            GEE DTDTGEES ADGETGRG      XXXXXX  SWKGGX  SGTLARAASRGSLPAA  XXXXXX    AGPQGGVGGV DAAPWEAAGSGGEGEKGA   PRS
Sbjct:  411 GEEVDTDTGEESGADGETGRGGNHRGGXXXXXXRASWKGGXXXSGTLARAASRGSLPAATAXXXXXXXXXXAGPQGGVGGVADAAPWEAAGSGGEGEKGAGGGPRS 516

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig9362.17527.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig9362.17527.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
Uncharacterized	1.620e-140	81.32	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	3.990e-112	88.85	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Uncharacterized	3.750e-21	79.25	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 186..220
None	No IPR available	COILS	Coil	Coil	coord: 327..375
None	No IPR available	COILS	Coil	Coil	coord: 256..304

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig9362	contig	Ecto-sp9_F_contig9362:134..5277 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig9362.17527.1	mRNA_Ecto-sp9_F_contig9362.17527.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig9362 134..5277 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig9362.17527.1 ID=prot_Ecto-sp9_F_contig9362.17527.1|Name=mRNA_Ecto-sp9_F_contig9362.17527.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=431bp
QEPDSGSYYDTSEEDDGEEADTDTGEESAADGETGRGGGHRSGGGGARRS
SWKGGGSGSGTLARAASRGSLPAAATAGGGGGTGAGPQGGVGGVDDAAPW
EAAGSGGEGEKGARDEPRSLTDLLEDLRQARAIADSRGRQLKEAHSMWEA
GEASRQKAEAELSLVSSELDLLRPFSKSLAARAEGKEAAEEAAGNLASEV
ETLREQLAAAVESAEKLGSRAGTAEDEAGASASKLSGLEKVVRRLGGEAE
VAHSELAKERAGAEEAVARASKAERELDQARARAAVLDNKLATLEKDKLE
LLADANSSRARASALEEKYSAAKAAEAAESEARVSELEGKVSSLESENLE
AVSRMEEALAKEAAAEERADKAVKMEEDTRAEMAGKTEEVMRLTAQRNSA
KSRADSLAKDLSRVCGGGRTLDQIEAIVTK*