mRNA_Ecto-sp9_F_contig9357.17519.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig9357.17519.1
Unique NamemRNA_Ecto-sp9_F_contig9357.17519.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9357.17519.1 vs.
Match: Vesicle (coat complex COPII, subunit SEC31 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBR5_ECTSI)

HSP 1 Score: 456 bits (1174), Expect = 6.290e-152
Identity = 247/270 (91.48%), Postives = 249/270 (92.22%), Query Frame = 1 
Query:    1 DASLLMSCAKDNRTLLWDLFSLKPVYELPPGAGADLPVSGRGSILDDESEGAGGDGIPAESELADAMAGVDLDETKFSKPGGSGGLFSGAPPGVVGXXXXXXGV--SNGQPLSKEAEAVIKRSLLVGNFEAAVQCCMSTGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKSANAAINGGTDTK 804
            DASLLMSCAKDNRTLLWDLFSLKPVYELPPGAGA+LP  G GSILDDESEGAGGDGIPAESELADAMAGVDLDETKFSKPGGS             XXXXXX    SNGQPL+KEAEAVIKRSLLVGNFEAAVQCCMSTGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLVE SDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKSANAAINGGTDTK
Sbjct:  277 DASLLMSCAKDNRTLLWDLFSLKPVYELPPGAGAELPAGG-GSILDDESEGAGGDGIPAESELADAMAGVDLDETKFSKPGGSSSXXXXXXXXXXXXXXXXXXXXXSNGQPLTKEAEAVIKRSLLVGNFEAAVQCCMSTGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLVEGSDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKSANAAINGGTDTK 545
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BLAST of mRNA_Ecto-sp9_F_contig9357.17519.1 vs.
Match: WW (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCD9_9PHAE)

HSP 1 Score: 412 bits (1058), Expect = 1.210e-131
Identity = 214/225 (95.11%), Postives = 217/225 (96.44%), Query Frame = 1 
Query:  130 ILDDESEGAGGDGIPAESELADAMAGVDLDETKFSKPGGSGGLFSGAPPGVVGXXXXXXGVSNGQPLSKEAEAVIKRSLLVGNFEAAVQCCMSTGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKSANAAINGGTDTK 804
            ILDDESEGAGGDGIPAESELADAMAGVDLDETKFSKPGG GG FSGAPPGVVG      G+SNGQPLSKEAEAVIKRSLLVGNFEAAVQCCMSTGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLV+ASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWA+ELKSANAAINGGTDTK
Sbjct:  543 ILDDESEGAGGDGIPAESELADAMAGVDLDETKFSKPGG-GGSFSGAPPGVVGGGAGAAGMSNGQPLSKEAEAVIKRSLLVGNFEAAVQCCMSTGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLVDASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWADELKSANAAINGGTDTK 766
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BLAST of mRNA_Ecto-sp9_F_contig9357.17519.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX94_HETAK)

HSP 1 Score: 200 bits (508), Expect = 1.630e-60
Identity = 99/147 (67.35%), Postives = 118/147 (80.27%), Query Frame = 1 
Query:  340 AEAVIKRSLLVGNFEAAVQCCMSTGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKSANAA 780
            AE +IKR+LLVGNFEAAVQCC+  G MADA++LASCGGA+LWA TQA+YF     +RPFL ++  IIKSELG LV A+ LG W+ETLAILSTYAK +EFP LCEALA+RLE EA D  +A LCYMCAV VPKTV +W  +L++AN A
Sbjct:   17 AEEMIKRALLVGNFEAAVQCCLKNGQMADALILASCGGAELWASTQARYFEAAGTRRPFLDLMACIIKSELGELVGANALGAWEETLAILSTYAKSDEFPVLCEALAARLEGEARDAAAATLCYMCAVNVPKTVGVWLRDLRAANLA 163
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BLAST of mRNA_Ecto-sp9_F_contig9357.17519.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E2_9STRA)

HSP 1 Score: 199 bits (506), Expect = 5.210e-58
Identity = 101/146 (69.18%), Postives = 113/146 (77.40%), Query Frame = 1 
Query:  337 EAEAVIKRSLLVGNFEAAVQCCMSTGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKSAN 774
            EAE VIKR+LLVGNFE AVQCC+  G MADA+++ASCGGADLWAKTQAQYF  E   RPFL +V+AII+SEL  LV  S L  WQETLAILSTYAK EEFP LCE LA RLE+E+ D  SA LCYMCAV V KTV+ W +EL   N
Sbjct:   65 EAEEVIKRALLVGNFEQAVQCCLKNGQMADALVVASCGGADLWAKTQAQYFETEGAYRPFLNIVSAIIRSELSKLVTTSKLTSWQETLAILSTYAKSEEFPGLCENLAERLESESFDVASATLCYMCAVNVHKTVQTWLDELHQVN 210
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BLAST of mRNA_Ecto-sp9_F_contig9357.17519.1 vs.
Match: Sec16_C (domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YCL1_AURAN)

HSP 1 Score: 192 bits (489), Expect = 4.840e-53
Identity = 96/155 (61.94%), Postives = 119/155 (76.77%), Query Frame = 1 
Query:  310 VSNGQPLSKEAEAVIKRSLLVGNFEAAVQCCMSTGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKSAN 774
            V  G PL   AEA +K++LLVGNF+AAV+ C +TG +ADA+LLASCGGA+LW +T+A+YF   S  +PFL VV AII +ELG LV ASDL +W+ETLAILSTY K +EFP LCEAL  RLE EA D K+A LCYMCAV VPKTV+ W ++  +A+
Sbjct:  574 VDPGAPLDAAAEADVKQALLVGNFDAAVESCFATGALADALLLASCGGAELWERTRARYFDISSKAKPFLGVVRAIITNELGALVAASDLRKWEETLAILSTYGKSDEFPALCEALGGRLEHEARDDKAAALCYMCAVNVPKTVKFWIDDFNAAS 728
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BLAST of mRNA_Ecto-sp9_F_contig9357.17519.1 vs.
Match: WD40 (repeat-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBK0_9STRA)

HSP 1 Score: 192 bits (489), Expect = 3.090e-52
Identity = 94/172 (54.65%), Postives = 126/172 (73.26%), Query Frame = 1 
Query:  283 VGXXXXXXGVSNGQPLSKEAEAVIKRSLLVGNFEAAVQCCMSTGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKSANAAINGGTD 798
            VG      G  N   +S+  + ++K++L+VGNFEAAV CC  TGN+ADA++LASCGGADLWAKTQ +YF  +S +RPFL VV AII++EL  L+++SDL  WQETLAILSTY K +EFP LC AL  RLE E+GD  SA+LC+MCA+ + K ++ W  +L ++NA+ +G  D
Sbjct:  507 VGSMSLSDGSHNDTGMSQPTQDIVKQALMVGNFEAAVDCCFRTGNLADALVLASCGGADLWAKTQERYFESQSSKRPFLSVVGAIIRNELPSLIQSSDLATWQETLAILSTYGKSDEFPQLCVALGDRLE-ESGDHSSASLCFMCALSLNKAIKYWRTQLANSNASKDGDMD 677
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BLAST of mRNA_Ecto-sp9_F_contig9357.17519.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2GAE0_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.090e-49
Identity = 90/149 (60.40%), Postives = 119/149 (79.87%), Query Frame = 1 
Query:  328 LSKEAEAVIKRSLLVGNFEAAVQCCMSTGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKSAN 774
            +S++AE ++K +LLVGNFEAAV CC   GN+ADA++LASCGGA+LWAKTQA+YFARE+ +RPFL +V+A+I ++L  LV ASD  +WQETLAILSTY K EEFP LC AL +RLE  AGD  SA+LC+MCA+ + + V+ W  +L+ A+
Sbjct:  507 MSEKAEDIVKEALLVGNFEAAVDCCFRNGNLADALVLASCGGAELWAKTQAEYFAREAQKRPFLSIVSAVIHNQLEDLVAASDPSKWQETLAILSTYGKSEEFPLLCLALGNRLEG-AGDGASASLCFMCALNLDRAVKHWKTQLEKAD 654
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BLAST of mRNA_Ecto-sp9_F_contig9357.17519.1 vs.
Match: Hypothetical (protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VZF3_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.520e-49
Identity = 90/149 (60.40%), Postives = 119/149 (79.87%), Query Frame = 1 
Query:  328 LSKEAEAVIKRSLLVGNFEAAVQCCMSTGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKSAN 774
            +S++AE ++K +LLVGNFEAAV CC   GN+ADA++LASCGGA+LWAKTQA+YFARE+ +RPFL +V+A+I ++L  LV ASD  +WQETLAILSTY K EEFP LC AL +RLE  AGD  SA+LC+MCA+ + + V+ W  +L+ A+
Sbjct:  507 MSEKAEDIVKEALLVGNFEAAVDCCFRNGNLADALVLASCGGAELWAKTQAEYFAREAQKRPFLSIVSAVIHNQLEDLVAASDPSKWQETLAILSTYGKSEEFPLLCLALGNRLEG-AGDGASASLCFMCALNLDRAVKHWKTQLEKAD 654
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BLAST of mRNA_Ecto-sp9_F_contig9357.17519.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UP54_9STRA)

HSP 1 Score: 181 bits (460), Expect = 1.660e-49
Identity = 90/159 (56.60%), Postives = 119/159 (74.84%), Query Frame = 1 
Query:  307 GVSNGQP-LSKEAEAVIKRSLLVGNFEAAVQCCMSTGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELKSANAA 780
            G ++G P +S+  + V+K +L+VGNFEAAV CC  TGN+ADA++LAS GG DLWAKTQ +YF  ++ +RPFL VV AII+++LG LVE S+L  WQETLAILSTY K +EFP LC AL  +L+  AGD  SA+LCYMCA+ + K V+ W  +L+  NA+
Sbjct:   66 GAAHGNPDMSQTTQNVVKEALMVGNFEAAVDCCFRTGNLADALVLASSGGGDLWAKTQERYFESQAKKRPFLSVVGAIIQNDLGSLVENSNLSNWQETLAILSTYGKSDEFPALCVALGDKLDA-AGDHSSASLCYMCALSLNKAVKHWRTKLEEQNAS 223
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9357.17519.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EAB3_9STRA)

HSP 1 Score: 184 bits (466), Expect = 3.650e-49
Identity = 90/147 (61.22%), Postives = 112/147 (76.19%), Query Frame = 1 
Query:  325 PLSKEAEAVIKRSLLVGNFEAAVQCCMSTGNMADAMLLASCGGADLWAKTQAQYFARESHQRPFLKVVNAIIKSELGVLVEASDLGQWQETLAILSTYAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELK 765
            PL+  AEA +KR+LLVGNF+AAV+ C   G +ADA+LLASCGGA+LW KT+A+YF + + +RPFL VV AII +EL  LV+ +DL +W+ETLAILSTY K EEFP LCEAL  RLE E  D+ +A+LCYMCAV V KTV  W  + K
Sbjct:  538 PLTPAAEADVKRALLVGNFDAAVEGCFKNGALADALLLASCGGAELWEKTRARYFEKAARKRPFLGVVRAIITNELDQLVQTADLNKWEETLAILSTYGKSEEFPQLCEALGQRLENEKRDQTAASLCYMCAVNVAKTVSFWISDYK 684
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9357.17519.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Vesicle6.290e-15291.48coat complex COPII, subunit SEC31 n=1 Tax=Ectocarp... [more]
WW1.210e-13195.11domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Hypothetical1.630e-6067.35protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Hypothetical5.210e-5869.18protein (Fragment) n=1 Tax=Fibrocapsa japonica Tax... [more]
Sec16_C4.840e-5361.94domain-containing protein (Fragment) n=1 Tax=Aureo... [more]
WD403.090e-5254.65repeat-like protein n=1 Tax=Fragilariopsis cylindr... [more]
Hypothetical1.090e-4960.40protein n=1 Tax=Ditylum brightwellii TaxID=49249 R... [more]
Hypothetical1.520e-4960.40protein n=3 Tax=Ditylum brightwellii TaxID=49249 R... [more]
Hypothetical1.660e-4956.60protein n=1 Tax=Pseudo-nitzschia delicatissima Tax... [more]
Hypothetical3.650e-4961.22protein n=2 Tax=Pelagomonas calceolata TaxID=35677... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9357contigEcto-sp9_F_contig9357:608..5300 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score453.4
Seed ortholog evalue7.4e-125
Seed eggNOG ortholog2880.D8LBR5
KEGG koko:K14005
KEGG Pathwayko04141,map04141
KEGG ModuleM00404
GOsGO:0006810,GO:0006886,GO:0006888,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016192,GO:0033036,GO:0034613,GO:0042886,GO:0045184,GO:0046907,GO:0048193,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705
EggNOG free text desc.vesicle-mediated transport
EggNOG OGsKOG0307@1,KOG0307@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04131
Hectar predicted targeting categoryother localisation
Exons6
Model size804
Cds size789
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931015.465025-UTR-Ecto-sp9_F_contig9357:607..6221622931015.465025-UTR-Ecto-sp9_F_contig9357:607..622Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig9357 608..622 +
1692278993.7045186-UTR-Ecto-sp9_F_contig9357:607..6221692278993.7045186-UTR-Ecto-sp9_F_contig9357:607..622Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig9357 608..622 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931015.489138-CDS-Ecto-sp9_F_contig9357:622..7281622931015.489138-CDS-Ecto-sp9_F_contig9357:622..728Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9357 623..728 +
1692278993.7193022-CDS-Ecto-sp9_F_contig9357:622..7281692278993.7193022-CDS-Ecto-sp9_F_contig9357:622..728Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9357 623..728 +
1622931015.5288882-CDS-Ecto-sp9_F_contig9357:2460..25761622931015.5288882-CDS-Ecto-sp9_F_contig9357:2460..2576Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9357 2461..2576 +
1692278993.730158-CDS-Ecto-sp9_F_contig9357:2460..25761692278993.730158-CDS-Ecto-sp9_F_contig9357:2460..2576Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9357 2461..2576 +
1622931015.5563252-CDS-Ecto-sp9_F_contig9357:3226..34321622931015.5563252-CDS-Ecto-sp9_F_contig9357:3226..3432Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9357 3227..3432 +
1692278993.740076-CDS-Ecto-sp9_F_contig9357:3226..34321692278993.740076-CDS-Ecto-sp9_F_contig9357:3226..3432Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9357 3227..3432 +
1622931015.5809488-CDS-Ecto-sp9_F_contig9357:3940..41241622931015.5809488-CDS-Ecto-sp9_F_contig9357:3940..4124Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9357 3941..4124 +
1692278993.7548938-CDS-Ecto-sp9_F_contig9357:3940..41241692278993.7548938-CDS-Ecto-sp9_F_contig9357:3940..4124Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9357 3941..4124 +
1622931015.598881-CDS-Ecto-sp9_F_contig9357:4414..45001622931015.598881-CDS-Ecto-sp9_F_contig9357:4414..4500Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9357 4415..4500 +
1692278993.7647026-CDS-Ecto-sp9_F_contig9357:4414..45001692278993.7647026-CDS-Ecto-sp9_F_contig9357:4414..4500Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9357 4415..4500 +
1622931015.6180298-CDS-Ecto-sp9_F_contig9357:5209..53001622931015.6180298-CDS-Ecto-sp9_F_contig9357:5209..5300Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9357 5210..5300 +
1692278993.7751045-CDS-Ecto-sp9_F_contig9357:5209..53001692278993.7751045-CDS-Ecto-sp9_F_contig9357:5209..5300Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9357 5210..5300 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9357.17519.1prot_Ecto-sp9_F_contig9357.17519.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig9357 623..5300 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig9357.17519.1

>prot_Ecto-sp9_F_contig9357.17519.1 ID=prot_Ecto-sp9_F_contig9357.17519.1|Name=mRNA_Ecto-sp9_F_contig9357.17519.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=263bp
MSCAKDNRTLLWDLFSLKPVYELPPGAGADLPVSGRGSILDDESEGAGGD
GIPAESELADAMAGVDLDETKFSKPGGSGGLFSGAPPGVVGGGAGGGGVS
NGQPLSKEAEAVIKRSLLVGNFEAAVQCCMSTGNMADAMLLASCGGADLW
AKTQAQYFARESHQRPFLKVVNAIIKSELGVLVEASDLGQWQETLAILST
YAKQEEFPTLCEALASRLETEAGDRKSANLCYMCAVKVPKTVEMWAEELK
SANAAINGGTDTK
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mRNA from alignment at Ecto-sp9_F_contig9357:608..5300+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig9357.17519.1 ID=mRNA_Ecto-sp9_F_contig9357.17519.1|Name=mRNA_Ecto-sp9_F_contig9357.17519.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4693bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9357:608..5300+ (Ectocarpus species9 EcSCA_722f female)
GACGCGAGCCTGCTCATGTCTTGCGCTAAGGACAACCGCACCCTCCTGTG
GGACCTGTTCAGCCTCAAGCCTGTCTACGAACTCCCTCCCGGCGCGGGCG
CGGATCTGCCGGTGAGTGGCCGTTTCTTTGTTTTTTGCGCGTGGGGTGGG
GGCGCTTGGGGTCTGGCCTGTTTGGCCGGTCAGGTGGTCTGTTGCAATTT
AAATATTTACGTACATGGTCATGGCGCTACTCGTGAAGCAGTCGGGCAGA
GGGCGTGCATTGTTGTGATGCGCGTGTCTTGGAAGTCGCACCGTTCCAGG
AGAGACACAACAAACCCTGAGATTTCTTTCCAGTCCAACTTTGGTACGTA
CCTGGTAGGTAGGTGTGAGAGCGTCCCCCCCCCCAGCGCCTGCTCTCATC
CCCCGCCTTTTTATGTTTGTTTCCATCTCCACGTCGCCTAACGCCCCCTC
ACGCCCCCACCTCGTACCCCCGTATTAAACACCACAAACGATGCACCCAT
CGCAACACACACAAAAAAAACAGCAAGAAAACGCTCAGATGTTCGGCGGG
TACGGCAAGACGGCCCAGCGGCGGTACCAGGTGTCGTGGTCCCCCCACAT
CCCCGCCGTGGTGAGCACGTGCTCCTTCGACCGAAAGGTCCAGCTGTTCA
GCATGAACGGCGCCAGCACCTCGAACGGCCGGGCTCCCAAGTGGCACCGC
CGCCCCGCCGGGGCCTCGTTCGCGTTCGGCGGCCGCCTCGTCTCCTTCTC
CGCGGCCGGCGGGGACGCGGCGGCGGGGAACGCCGCCGTCGGCCAGCAGG
TGAGGGGAGGGGGTGTTTGGGTCGGTGGGAGGTCCACAGGTTTTGGGGGA
AGTGGGAGAGTGGGGGGGGTTCGCTTTGGGTCCGGCCCGTGAGTTGATTG
TCCATCACCTTTGCATGGGATTTGTTTTTTTGGCTCTTGTTCGCTCGATT
TGCAAGGTGGTCTACCCGCTCATTTGCCGTGTACAGCAGCAGCGGCAGCG
ACACTGCGGTATTGTATCGTATTGCATGTATCCGCTTTCTTAACACCGTA
CCACCCCAAGTCTTCGTCCGCACTACCATACGGTTGCACACACACACACA
CAATGCGCGCGTGCGTACGAACGTGTAGGCTTCCGCCGCCGCCGCCGCCG
GAAGCAAGACTGTCAAGATCTCGTCGGTGAAGGAGGACGCCGCGTTCGTG
GCTGCGTCTAGGCGGTTCGAGGAGGCCATGGCGACCCAGGGGTTCCGCGG
TTTCTGCCAGGAGAAGGAGGCCTCGGCCGCCACCGCGCACGAGCGTCGGG
TGTGGCAGTTCATGCAGGTCATCTTCGAGAAGAACGCCCGGAACCAGCTC
CTGGCGCACCTCGGCTTCGACGGGGAGACGGTGGCGAAGTGAGAGAGAGT
GCGGGGGGGGGGCGGTTGTGTCGTGACATTTTTGTTGGTTTTGGCGTTTT
CTTGGTGGTCTACCCACTGGTTTTTGAGTAGGCGCTGTCGGAAGAGGACG
GGAAAGGAAGGGGTGGGGGGGAGTAGTGTTTTTTGGCGAGCCTGAGGTGT
TGATGGGCAGGTGGTGGTAGAGTACGTCATGTATGCAAGGTGGGTGGGGG
GGGGGGTGTAGCCAGTGCGTAACGATGCTCCCTCGGCCACCCAACCTCTG
ACCTGCGGTTGTACAACGAGAATCCTACAATAGACTAGCAGCAATGACAA
CGTCAACGTGTTACAGTGAGAAAACGATAACCATAACGACAACGTCAACG
CGCAGGCAAGCCGCTGAGTTCGTGGCTGCGTCCGGCGGCCGCCAGGATAA
CGGTGGCTCGCTGCTGCCGCCACCGCCGCGTGACACTTCTCCCAACGCCG
GAGGCGGCAGCATCCTGGACGATGAGTCGGAGGGGGCGGGGGGTGACGGC
ATCCCCGCAGAGTCGGAGCTGGCGGACGCGATGGCCGGGGTGGACTTGGA
CGAAACGAAGTTCAGCAAGGTGAGAGAGCGTTTTTTTGTTTGTTGCTGCT
ACAGGTAGCGGCCACACTGAAGAACCCCTATTATAGTTTTGGCGGAGTCT
GGGATTCTTAGTTCCTCTTGTGGGCTACAAATGGCCGCTGCTACATGTAA
TTGTTAACCGGGCTCGCAATCGATACAGTGTTGTCAATGTTGAGCATGAA
CTTCTCAAGTACGGGCGCTATCTGTATGGAATGAATCGCGATCCGTTTTT
TTAGTACTGAGTACTGCTGTTGCGTGTTTTCTCTCCGGGGTGTGTGCCGA
TCTGTGTCTCATCTAAGAATGTGGAGGTAAGTCTATAGGCGGTGTTGCGC
CTTATACCAAGACATGTGCTCCACCTCGCCCAAACAATTTCTGGCTCATG
GTCCACCTTGTCTCCGAGAGGTGGATGTACCGATGGGCTCACTGCGACAC
TTATGGTATCTCCCCCCTCCCTGCAGAAACAAGGCTTGCCCCTCGAGGAT
TGGCCAACCTCTAAACCCTCTCGTTTCCCCGCCGACGCTAAAATAAGCGT
CCCGTTCTGATGATGCCGCTCTTCGTGCTTTCATTCCCGCGATACGAAAA
CGAACCAAATTCTAACACAACCGCCCCAACAACAAATGTTGCCATTACAA
CAACAATGGGACAACAAAGCCTGGCGGCAGCGGCGGTTTGTTTTCCGGAG
CACCACCTGGCGTTGTTGGAGGCGGCGCCGGGGGGGGGGGGGTGTCGAAC
GGCCAGCCCCTGTCCAAAGAGGCGGAGGCGGTGATCAAGAGGTCTCTGCT
CGTGGGTAACTTCGAGGCGGCCGTGCAGTGCTGCATGTCCACGGGGAACA
TGGCGGACGCCATGCTGTTGGCCAGGTGCGTGTGCCTGTTGGATGAGTCG
GCGGGTTGGGTTGGTCTGGTCTTGAGGTGGATTGGGTTTTCGGTTTTTTT
TTTTGGCTGTTTTTTGTCTTCTTTTTTTGTTTGTTGTGACCCCACGGTCA
CGTTGACGTTGACGTTGACGTTAATGGGTTTGGTGGTATTTCGTGTGGGG
CGGGCCCTTGTTTTTCCGCGTGTTGTACGCCTGCCGTCATCAACCATTCC
GTCACGCATTCGTCTGTTGGCATTGTCGGACCGCCACAGCTTTCGAATTA
TCGTTCCACCAAAACATCAACAAGCAACAGCAGTTCCTTCCGTCGGGAAA
ACTCCAGACGGGGCGGCTTGTTTTTTATGCAAAAGCACTGCGATACTGCT
GTTGAGACCAAACCAAACCAAACCAAAGTGAAGATAACAAACGAAAAAAG
ACAAGCGACATGATACAGTCGAAACGACACATGCAAAACGATACAAGCCA
CATGACGCATCCCAACCGACACAAACGGAACAGCTGCGGGGGCGCGGATC
TGTGGGCCAAGACCCAAGCCCAGTACTTCGCGCGAGAGTCGCACCAGCGC
CCCTTCCTCAAGGTGGTGAATGCCATCATCAAGTCCGAGCTGGGGGTCCT
CGTGGAGGCGAGCGATCTCGGGCAGTGGCAGGAGACCCTGGCCATCCTGT
CCACGTACGCCAAGCAGGTGGGTGAAACACGCATATTATATATATCACAC
CTGAGGTAGGGTAAGGTTTCGTTTGGTTGCCTTCATATGTTAAACGCGAT
TCGTGGGAAATGGAACAAGAAGTGCTGCCCCGCGCATGGCGGCAACACAA
CATGGATAGAAACGTCCGCCCCGACGAAATTGGTGAAAGCCCCCACTGCT
GTCTCATCCACATCGATAGCATCCCCACTGTACCGGTACTGCTTGGCTGT
CTGTTGTTGAGTACCGTTGCTTGTCACGGCCGGCGTAACGCTGAAATGGT
TCATCAGGAGGAGTTCCCTACTCTCTGCGAGGCCTTGGCGTCGCGACTGG
AGACCGAGGCCGGGGACCGGAAGTCGGCTAACCTCTGCTACATGTGAGGG
CGTGAGGAGGGAGAGAGTTTGGTGGGCGAGAGGGGGGGGGGGGGGGGGGG
GAAGCAGGGGTGTGCAGCAAACCCCCGGGTTGGAGGTTGGGGTGGCGGGG
GGGCGGTGGCGCTTTACCGGAGAAAAAGGGGNNNNNNNNNNGGGCGGGGG
GGTCGCCCCCCTCCGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGGGGGGGCGAAGCATGCTGTTGCAGCAAACTCC
AGCGTTGCAGTTTGGCATGCCGGGGTGCTACTGCAGTTTTACAGCTGAAA
AAGCGGTCCGATATCTATCTATCGAGTACCTCCTGTTTGGTACCAGTGCT
TACCCGTTCCAGTGGCACAAATTGGCATCGTGAGTGAAGAGACGGGTCGT
TTCTTGTGGTGTCAGAGATGGATTGATCCATATATCCCGGAAGGATTCAT
GTTGAGAAACTAGAAAAGATATGGTGGCAGCACCTTGCTTGTGCCCCCCA
TTTTTGATTGCGCACCCACCCACTGCACGCGCCGACTCGAAAATTGTACG
TAGGTGAGGAAAAATATGTCCCAAAAGGCAACGTACGCAGACAGCAGTGC
CGCCGGCCATTCGACCCCTGGGGCACCACCAATCGACTCCAAACCCCTTT
ATGTGTCCATCACTCCGGGCTCTGCGGCGCGTCTCTCTAATTCATCTACC
AGGTGCGCTGTGAAGGTGCCCAAGACGGTGGAGATGTGGGCGGAGGAGCT
CAAATCGGCCAACGCAGCCATCAACGGGGGCACGGACACGAAG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9357:608..5300+

>mRNA_Ecto-sp9_F_contig9357.17519.1 ID=mRNA_Ecto-sp9_F_contig9357.17519.1|Name=mRNA_Ecto-sp9_F_contig9357.17519.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1578bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9357:608..5300+ (Ectocarpus species9 EcSCA_722f female)
ATGTCTTGCGCTAAGGACAACCGCACCCTCCTGTGGGACCTGTTCAGCCT
CAAGCCTGTCTACGAACTCCCTCCCGGCGCGGGCGCGGATCTGCCGGTGA
GTGGCCATGTCTTGCGCTAAGGACAACCGCACCCTCCTGTGGGACCTGTT
CAGCCTCAAGCCTGTCTACGAACTCCCTCCCGGCGCGGGCGCGGATCTGC
CGGTGAGTGGCCGCGGCAGCATCCTGGACGATGAGTCGGAGGGGGCGGGG
GGTGACGGCATCCCCGCAGAGTCGGAGCTGGCGGACGCGATGGCCGGGGT
GGACTTGGACGAAACGAAGTTCAGCAAGGCGGCAGCATCCTGGACGATGA
GTCGGAGGGGGCGGGGGGTGACGGCATCCCCGCAGAGTCGGAGCTGGCGG
ACGCGATGGCCGGGGTGGACTTGGACGAAACGAAGTTCAGCAAGCCTGGC
GGCAGCGGCGGTTTGTTTTCCGGAGCACCACCTGGCGTTGTTGGAGGCGG
CGCCGGGGGGGGGGGGGTGTCGAACGGCCAGCCCCTGTCCAAAGAGGCGG
AGGCGGTGATCAAGAGGTCTCTGCTCGTGGGTAACTTCGAGGCGGCCGTG
CAGTGCTGCATGTCCACGGGGAACATGGCGGACGCCATGCTGTTGGCCAG
CCTGGCGGCAGCGGCGGTTTGTTTTCCGGAGCACCACCTGGCGTTGTTGG
AGGCGGCGCCGGGGGGGGGGGGGTGTCGAACGGCCAGCCCCTGTCCAAAG
AGGCGGAGGCGGTGATCAAGAGGTCTCTGCTCGTGGGTAACTTCGAGGCG
GCCGTGCAGTGCTGCATGTCCACGGGGAACATGGCGGACGCCATGCTGTT
GGCCAGCTGCGGGGGCGCGGATCTGTGGGCCAAGACCCAAGCCCAGTACT
TCGCGCGAGAGTCGCACCAGCGCCCCTTCCTCAAGGTGGTGAATGCCATC
ATCAAGTCCGAGCTGGGGGTCCTCGTGGAGGCGAGCGATCTCGGGCAGTG
GCAGGAGACCCTGGCCATCCTGTCCACGTACGCCAAGCAGCTGCGGGGGC
GCGGATCTGTGGGCCAAGACCCAAGCCCAGTACTTCGCGCGAGAGTCGCA
CCAGCGCCCCTTCCTCAAGGTGGTGAATGCCATCATCAAGTCCGAGCTGG
GGGTCCTCGTGGAGGCGAGCGATCTCGGGCAGTGGCAGGAGACCCTGGCC
ATCCTGTCCACGTACGCCAAGCAGGAGGAGTTCCCTACTCTCTGCGAGGC
CTTGGCGTCGCGACTGGAGACCGAGGCCGGGGACCGGAAGTCGGCTAACC
TCTGCTACATGAGGAGTTCCCTACTCTCTGCGAGGCCTTGGCGTCGCGAC
TGGAGACCGAGGCCGGGGACCGGAAGTCGGCTAACCTCTGCTACATGTGC
GCTGTGAAGGTGCCCAAGACGGTGGAGATGTGGGCGGAGGAGCTCAAATC
GGCCAACGCAGCCATCAACGGGGGCACGGACACGAAGGTGCGCTGTGAAG
GTGCCCAAGACGGTGGAGATGTGGGCGGAGGAGCTCAAATCGGCCAACGC
AGCCATCAACGGGGGCACGGACACGAAG
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