prot_Ecto-sp9_F_contig9305.17469.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9305.17469.1
Unique Nameprot_Ecto-sp9_F_contig9305.17469.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length118
Homology
BLAST of mRNA_Ecto-sp9_F_contig9305.17469.1 vs.
Match: Importin (N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF61_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 2.860e-60
Identity = 104/107 (97.20%), Postives = 104/107 (97.20%), Query Frame = 0
Query:    6 QVLANDVVEFMPYVFQIFSQLLELRPPGEFSGGYKGLFAPLLSPSVWERKGNIPAVTRLLQAYLSKNAVAVVEWGSLAGVLGTFQKLLSTRANEAYAFQLLGTIVVN 112
            QVLANDVVEFMPYVFQIFSQLLELRP GEFS GYKGLFAPLLSPSVWERKGNIPAVTRLLQAYL KNAVAVVEWGSLAGVLGTFQKLLSTRANEAYAFQLLGTIVVN
Sbjct:  631 QVLANDVVEFMPYVFQIFSQLLELRPAGEFSAGYKGLFAPLLSPSVWERKGNIPAVTRLLQAYLCKNAVAVVEWGSLAGVLGTFQKLLSTRANEAYAFQLLGTIVVN 737          
BLAST of mRNA_Ecto-sp9_F_contig9305.17469.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2N2_TRICV)

HSP 1 Score: 127 bits (319), Expect = 2.310e-33
Identity = 64/104 (61.54%), Postives = 78/104 (75.00%), Query Frame = 0
Query:   11 DVVEFMPYVFQIFSQLLELRPPGEFSG-GYKGLFAPLLSPSVWERKGNIPAVTRLLQAYLSKNAVAVVEWGSLAGVLGTFQKLLSTRANEAYAFQLLGTIVVNV 113
            DV EF PYVFQ+ +QLLE RP     G  YK LF PLL+P +WERKGNIPA+TRLLQAYL K A  +V  G L G+LG FQKL+S++ANEA AF LL ++V++V
Sbjct:    2 DVSEFTPYVFQVLAQLLEYRPRDSGLGDAYKSLFPPLLTPMLWERKGNIPALTRLLQAYLLKGASEIVAMGQLMGLLGVFQKLVSSKANEASAFDLLSSVVIHV 105          
BLAST of mRNA_Ecto-sp9_F_contig9305.17469.1 vs.
Match: Importin (N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEN1_THAPS)

HSP 1 Score: 125 bits (314), Expect = 4.980e-31
Identity = 63/108 (58.33%), Postives = 79/108 (73.15%), Query Frame = 0
Query:    7 VLANDVVEFMPYVFQIFSQLLELRPPGEFSG-GYKGLFAPLLSPSVWERKGNIPAVTRLLQAYLSKNAVAVVEWGSLAGVLGTFQKLLSTRANEAYAFQLLGTIVVNV 113
            VL  +VVEF PYVFQ+ +Q+LE RP G   G  Y  L  PLL+P++WERKGNIPA++RLL AYLSK A  +V+   L G+LG FQKL+S++ANE YAF LL  IV+ V
Sbjct:  673 VLQMEVVEFTPYVFQLLAQILEFRPEGAGLGDAYSSLLPPLLTPTLWERKGNIPALSRLLTAYLSKGAAEIVQQNLLLGILGVFQKLISSKANEQYAFDLLRAIVLYV 780          
BLAST of mRNA_Ecto-sp9_F_contig9305.17469.1 vs.
Match: Cse1-domain-containing (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZE8_9STRA)

HSP 1 Score: 125 bits (313), Expect = 6.790e-31
Identity = 65/109 (59.63%), Postives = 77/109 (70.64%), Query Frame = 0
Query:    6 QVLANDVVEFMPYVFQIFSQLLELRPP-----GEFSGGYKGLFAPLLSPSVWERKGNIPAVTRLLQAYLSKNAVAVVEWGSLAGVLGTFQKLLSTRANEAYAFQLLGTI 109
            QVLA DVVEF PYV QI +QLLELRP        F+  Y  LF PLLSP +WER+GN+PA+ RLLQAYL K+A A+   G L  +LG FQKLL+TRA E +AF LL +I
Sbjct:  633 QVLAQDVVEFAPYVLQILAQLLELRPTVTGGASGFTPAYTALFPPLLSPVLWERRGNVPALVRLLQAYLRKDAAALANAGHLPAMLGVFQKLLATRATEEHAFALLSSI 741          
BLAST of mRNA_Ecto-sp9_F_contig9305.17469.1 vs.
Match: Importin (N-terminal domain-containing protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4M3_THAOC)

HSP 1 Score: 122 bits (306), Expect = 5.970e-30
Identity = 64/109 (58.72%), Postives = 81/109 (74.31%), Query Frame = 0
Query:    7 VLANDVVEFMPYVFQIFSQLLELRPPGEFSG-GYKGLFAPLLSPSVWERKGNIPAVTRLLQAYLSKNAVAVVEWGSLAGVLGTFQKLLSTRANEAYAFQLLGTIVVNVS 114
            VL  +VVEF PYVFQ+ +Q+LE RP G   G  Y  LFAPLL+P +WER+GN+PA+TRLL AYL+K A  +V    L G+LG FQKL+S++ANEAYAF LL  IV+ +S
Sbjct:  660 VLQMEVVEFTPYVFQLLAQILEFRPEGAGLGEAYTSLFAPLLTPLLWERRGNVPALTRLLTAYLAKGASEIVL--QLEGMLGVFQKLISSKANEAYAFDLLRGIVIYMS 766          
BLAST of mRNA_Ecto-sp9_F_contig9305.17469.1 vs.
Match: Cse1 (protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813A5P1_SYMMI)

HSP 1 Score: 112 bits (281), Expect = 1.700e-28
Identity = 57/105 (54.29%), Postives = 73/105 (69.52%), Query Frame = 0
Query:    7 VLANDVVEFMPYVFQIFSQLLELRPPGE-FSGGYKGLFAPLLSPSVWERKGNIPAVTRLLQAYLSKNAVAVVEWGSLAGVLGTFQKLLSTRANEAYAFQLLGTIV 110
            +L  DVVEF+PYVFQ+  QLL  RP G   S  Y  LF PLLSP +W R+GN+PA+T L+ AY+ +    +VE G L GVLG FQKLL+++A E YAF+L+  IV
Sbjct:  123 ILQLDVVEFVPYVFQVLGQLLSYRPAGGGLSTAYSDLFPPLLSPVLWLRRGNVPALTDLVLAYIYQGMGEIVENGLLEGVLGVFQKLLASKATEVYAFKLINAIV 227          
BLAST of mRNA_Ecto-sp9_F_contig9305.17469.1 vs.
Match: Cse1-domain-containing (protein n=1 Tax=Zopfia rhizophila CBS 207.26 TaxID=1314779 RepID=A0A6A6DRH8_9PEZI)

HSP 1 Score: 118 bits (295), Expect = 1.810e-28
Identity = 52/107 (48.60%), Postives = 79/107 (73.83%), Query Frame = 0
Query:    7 VLANDVVEFMPYVFQIFSQLLELRPPGEFSGGYKGLFAPLLSPSVWERKGNIPAVTRLLQAYLSKNAVAVVEWGSLAGVLGTFQKLLSTRANEAYAFQLLGTIVVNV 113
            +L +DV EF+PYVFQ+F+ LLE  P GE +  YK L AP+L PS+WE KGN+PA+ RLL A +S+    +V+   +  +LG FQKL+ST+A+EAY+F+L+ +++ ++
Sbjct:  645 ILQDDVQEFIPYVFQLFAALLESNPSGELTSYYKALLAPILMPSLWESKGNVPALVRLLTAVISRGPQDIVQSNQVEPILGIFQKLVSTKAHEAYSFELIESVIAHI 751          
BLAST of mRNA_Ecto-sp9_F_contig9305.17469.1 vs.
Match: Chromosome (segregation protein Cse1, putative n=27 Tax=Aspergillus TaxID=5052 RepID=B8NDT9_ASPFN)

HSP 1 Score: 117 bits (293), Expect = 3.380e-28
Identity = 56/106 (52.83%), Postives = 74/106 (69.81%), Query Frame = 0
Query:    7 VLANDVVEFMPYVFQIFSQLLELRPPGEFSGGYKGLFAPLLSPSVWERKGNIPAVTRLLQAYLSKNAVAVVEWGSLAGVLGTFQKLLSTRANEAYAFQLLGTIVVN 112
            VL  DV EFMPY+FQ+F+ LLE  P G     Y+ L AP+L P +WE KGNIPA+ RLL + +++ +  V+E   L+ VLG FQKLLST+ANE+Y F LL ++V N
Sbjct:  647 VLQGDVQEFMPYIFQLFAALLEANPSGSLPNYYQNLVAPILMPVMWESKGNIPALVRLLSSIIARGSQYVLENQQLSNVLGIFQKLLSTKANESYGFDLLESVVAN 752          
BLAST of mRNA_Ecto-sp9_F_contig9305.17469.1 vs.
Match: Importin (N-terminal domain-containing protein n=2 Tax=Microbotryum TaxID=34416 RepID=U5HC56_USTV1)

HSP 1 Score: 116 bits (291), Expect = 6.290e-28
Identity = 53/104 (50.96%), Postives = 77/104 (74.04%), Query Frame = 0
Query:    7 VLANDVVEFMPYVFQIFSQLLELRPPGEFSGGYKGLFAPLLSPSVWERKGNIPAVTRLLQAYLSKNAVAVVEWGSLAGVLGTFQKLLSTRANEAYAFQLLGTIV 110
            +L ND+ EF P+VFQI SQLLEL   G+F   Y+ L  P+L+P++WE KGN+PA+ RLL+A+L++ A ++VE   L  +LG FQ L+ ++AN+AY F+LL +IV
Sbjct:  660 ILQNDISEFTPFVFQILSQLLELHAEGDFPEAYRVLLPPMLTPALWESKGNVPALVRLLRAFLARGAPSIVEANQLPPMLGIFQHLVGSKANDAYGFELLESIV 763          
BLAST of mRNA_Ecto-sp9_F_contig9305.17469.1 vs.
Match: BQ5605_C037g11573 (protein n=2 Tax=Microbotryum TaxID=34416 RepID=A0A2X0MFA5_9BASI)

HSP 1 Score: 116 bits (291), Expect = 6.440e-28
Identity = 53/104 (50.96%), Postives = 77/104 (74.04%), Query Frame = 0
Query:    7 VLANDVVEFMPYVFQIFSQLLELRPPGEFSGGYKGLFAPLLSPSVWERKGNIPAVTRLLQAYLSKNAVAVVEWGSLAGVLGTFQKLLSTRANEAYAFQLLGTIV 110
            +L ND+ EF P+VFQI SQLLEL   G+F   Y+ L  P+L+P++WE KGN+PA+ RLL+A+L++ A ++VE   L  +LG FQ L+ ++AN+AY F+LL +IV
Sbjct: 1229 ILQNDISEFTPFVFQILSQLLELHAEGDFPEAYRVLLPPMLTPALWESKGNVPALVRLLRAFLARGAPSIVEANQLPPMLGIFQHLVGSKANDAYGFELLESIV 1332          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9305.17469.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Importin2.860e-6097.20N-terminal domain-containing protein n=1 Tax=Ectoc... [more]
Hypothetical2.310e-3361.54protein n=1 Tax=Trieres chinensis TaxID=1514140 Re... [more]
Importin4.980e-3158.33N-terminal domain-containing protein n=1 Tax=Thala... [more]
Cse1-domain-containing6.790e-3159.63protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Importin5.970e-3058.72N-terminal domain-containing protein n=2 Tax=Thala... [more]
Cse11.700e-2854.29protein (Fragment) n=1 Tax=Symbiodinium microadria... [more]
Cse1-domain-containing1.810e-2848.60protein n=1 Tax=Zopfia rhizophila CBS 207.26 TaxID... [more]
Chromosome3.380e-2852.83segregation protein Cse1, putative n=27 Tax=Asperg... [more]
Importin6.290e-2850.96N-terminal domain-containing protein n=2 Tax=Micro... [more]
BQ5605_C037g115736.440e-2850.96protein n=2 Tax=Microbotryum TaxID=34416 RepID=A0A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 5..116
e-value: 2.9E-27
score: 97.0
IPR005043Exportin-2, C-terminalPFAMPF03378CAS_CSE1coord: 6..114
e-value: 9.3E-41
score: 139.7
NoneNo IPR availablePANTHERPTHR10997:SF8EXPORTIN-2coord: 6..114
NoneNo IPR availablePANTHERPTHR10997IMPORTIN-7, 8, 11coord: 6..114
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 7..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9305contigEcto-sp9_F_contig9305:588..1752 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9305.17469.1mRNA_Ecto-sp9_F_contig9305.17469.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9305 588..1752 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9305.17469.1 ID=prot_Ecto-sp9_F_contig9305.17469.1|Name=mRNA_Ecto-sp9_F_contig9305.17469.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=118bp
MVRHPQVLANDVVEFMPYVFQIFSQLLELRPPGEFSGGYKGLFAPLLSPS
VWERKGNIPAVTRLLQAYLSKNAVAVVEWGSLAGVLGTFQKLLSTRANEA
YAFQLLGTIVVNVSVYV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR005043XPO2_C
IPR016024ARM-type_fold