prot_Ecto-sp9_F_contig926.17422.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig926.17422.1
Unique Nameprot_Ecto-sp9_F_contig926.17422.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length349
Homology
BLAST of mRNA_Ecto-sp9_F_contig926.17422.1 vs.
Match: PDZ (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNU4_ECTSI)

HSP 1 Score: 567 bits (1461), Expect = 1.370e-201
Identity = 320/353 (90.65%), Postives = 332/353 (94.05%), Query Frame = 0
Query:    2 AGVRVNDTIAAIDGNASPAAHEDLVDIIRAIGRPVVIGFHRSGGGGKEAKGAGARAQEPGPFQRAQDAARRKMDEIKGPPQPPPMTAEAKAERREAALKAAESRTKHWDKQLNKGRQASQTKSGTGGVTENQFEDSGNAKTRRMVELAKQQEARTAASMGYNPYEARLMGNTAARAAISGAG-----APLTSPPPPDRQXXXXXXAPAEA-TADLGEEEKWVGEKAAMADAVAAEIEGALGAVLAQEPGVSLTAVTTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMMAAGFSLQTDGDEPVLQHGPCDPVPLRLTVAIRKLAQAEAMLKDSGSTARPAGSR 348
            AGVRVNDTIAAIDGNASPAAHEDLVD++RAIGRPVVIGFHRSGGGGKEAKGAGA AQEPGPFQRAQDAARRKMDEIKGPPQPPPMTAEAKAERREAALKAAESRTK W+K+LNKGRQASQTKSGTGGVTENQFEDSGNA+TRRMVELAKQQEARTA+SMGYNPYEARLMGNTAARAAISGAG     APLTSP      XXXXXX      TA+LGE+E+W+GE+AAMADAVAAEIEGALGAVL QEPGVSLTAVTTMLKMMKNMTAKSS+DKFKRIRLGNANFNSKVGGIDGGLEVM AAGFSLQTDGDEPVLQHGPCDPVPLRLTVAIRKLAQAEAMLKDSGSTARPAGSR
Sbjct:   31 AGVRVNDTIAAIDGNASPAAHEDLVDVVRAIGRPVVIGFHRSGGGGKEAKGAGATAQEPGPFQRAQDAARRKMDEIKGPPQPPPMTAEAKAERREAALKAAESRTKDWNKRLNKGRQASQTKSGTGGVTENQFEDSGNAETRRMVELAKQQEARTASSMGYNPYEARLMGNTAARAAISGAGDSGAGAPLTSPXXXXXXXXXXXXXXXXXXTANLGEKEEWIGEEAAMADAVAAEIEGALGAVLEQEPGVSLTAVTTMLKMMKNMTAKSSDDKFKRIRLGNANFNSKVGGIDGGLEVMTAAGFSLQTDGDEPVLQHGPCDPVPLRLTVAIRKLAQAEAMLKDSGSTARPAGSR 383          
BLAST of mRNA_Ecto-sp9_F_contig926.17422.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DP17_9STRA)

HSP 1 Score: 102 bits (254), Expect = 8.410e-21
Identity = 98/314 (31.21%), Postives = 154/314 (49.04%), Query Frame = 0
Query:    3 GVRVNDTIAAIDGNASPAAHEDLVDIIRAIGRPVVIGFHRSGGGGKEAKGAGARAQEPGPFQRAQDAARRKMDEIKGPPQPPPMTAEAKAERREAALKAAESRTKHWDKQLN-----KGRQASQTKSGTGGVTENQFEDSGNAKTRRMVELAKQQEARTAASMGYNPYEARLMGNTAARAAISGAGAPLTSPPPPDRQXXXXXXAPAEATADLGEEEKWVGEKAAMADAVAAEIEGALGAVLAQEPGVSLTAVTTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMMAAGFSLQTDGDEPVLQH 311
            GV+V   I AIDGN  P         I+++ RPVV+ F   G   K  KG  +  ++ GP                      P++A   A RREA+LKAAESR   WDK+L      KGRQA   K+  G   + +     +A+++R+ + A+ +E RT   +GYNPY++++  +++                     XXXXXX      + L ++    G            ++ ALG + +Q P ++  AVTT+LK++ N+  K  ++K  R+R+ N  F  KV  ++GG++ M+AAGF+L  D +E VL +
Sbjct:   77 GVQVGHRIVAIDGN--PIKFSQFSSFIQSMPRPVVLTFQ--GVAKKPKKGPMSVLKKKGPD---------------------PLSARENAIRREASLKAAESRGNAWDKKLGATRREKGRQAQAEKASMGANNDAEM----SAESKRVFDAARAKETRTTNELGYNPYQSQI--SSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLSQQASPHGAGDPFDSFTVEAMDMALGLISSQPPQIAKEAVTTLLKLLNNLETKFEDEKVHRVRVANKTFAKKVASVNGGIDFMVAAGFTLTEDAEETVLVY 359          
BLAST of mRNA_Ecto-sp9_F_contig926.17422.1 vs.
Match: PDZ (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7Q3_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 2.300e-16
Identity = 97/353 (27.48%), Postives = 150/353 (42.49%), Query Frame = 0
Query:    3 GVRVNDTIAAIDGNASPAAHEDLVDIIRAIGRPVVIGFHRSGGGGKEAKGAGARAQEPGPFQRAQDAARRKMDEIKGP---PQPPPMTAEAKAERREAALKAAESRTKHWDKQLNKGRQASQTKSGTGGVTENQFEDSGNAKTRRMVELAKQQEARTAASMGYNPYEARLMGNTAARAAISGAG---------------APLTSPPPPDRQXXXXXXAPAEA------TADLGEEEKWVGEKAAMADAVAAEIEGALGAVLAQEPGVSLTAVTTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMMAAGFSLQTDGDEPVLQ-HGPCDPVPLRLTVAIRKLAQ 330
            GV + D + ++DGN    ++E L   + A+ RPV   FHRSG                               ++  P   P  PP       ERR   L AAE R++ WD+++ +     +  S   G   ++F  + +  T+  V   K  EA   A++GYNPYE+  M    A A I  AG               +PL S P P         +P+ +       A L +EE     ++  A     E + A+  +L +       A +T+L ++ N+ A  + +KF+R+RL NA F SKV  + G ++++ AAGF    +  E  L   GP   VPLR  V   ++ Q
Sbjct:   85 GVHIGDIVISVDGNPV-TSYESLEVALCAMERPVTFSFHRSG-----------------------------TSDLVQPVAHPTLPPSDESGDVERRRRILTAAEERSRAWDRKVQRAGGNHRGTSKKSGEGLDRFGANDDEATKAQVAQIKNFEAAQTAALGYNPYESHSMSRAQALARIELAGPTPSGSNSRTSAAALSPLNSQPHPPPSWTPTSLSPSLSGDRRPLVAPLSQEEL----ESPEAFQAGEEADSAMALMLDRPSPAWRAAASTVLTILGNVLADPAHEKFRRVRLQNAAFQSKVVAVPGAVDMLHAAGFGYTMEDQETFLSLPGPALEVPLRARVIYYRIQQ 403          
BLAST of mRNA_Ecto-sp9_F_contig926.17422.1 vs.
Match: Hypothetical (protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPU7_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 3.430e-15
Identity = 69/222 (31.08%), Postives = 110/222 (49.55%), Query Frame = 0
Query:   91 KAERREAALKAAESRTKHWDKQLNKGRQASQTKSGTGGVTENQFEDSGNAKTRRMVELAKQQEARTAASMGYNPYEARLMGNTAARAAISGAGAPLTSPPPPDRQXXXXXXAPAEATADLGEEEKWVGEKAAMADAVAAEIEGALGAVLAQEPGVSL--TAVTTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMMAAGFSLQTDGDEPVLQ 310
            K  RR A  KAA  R   W++++    Q  +  +    V+  +  +  N +TR   E A Q+ A     +GY+PY+  L G +A+  + S         PPP ++         + + D               D  + E++ AL A+ + + G       V T+LK++ N+  K+ E KF+R+RL NAN  +K+  I+GGLE+++AAGF LQ DGDE +LQ
Sbjct:  144 KEARRVAQAKAALERDGAWNRRVASRPQGGKLANTRNPVSSTEEANLSNPETRAAWEAAAQRHAEQTRELGYDPYKPLLTGTSASSQSASR--------PPPQKKDEGTRLGGNDESKDY--------------DTASTEVQVALQALASSDKGTEAQEACVATLLKLLDNVLNKTDE-KFRRVRLANANIQAKILEIEGGLEILIAAGFQLQPDGDETILQ 342          
BLAST of mRNA_Ecto-sp9_F_contig926.17422.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US51_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 7.620e-12
Identity = 36/80 (45.00%), Postives = 53/80 (66.25%), Query Frame = 0
Query:  228 AAEIEGALGAVLAQEPGVSLTAVTTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMMAAGFSLQTDGDEP 307
            A E+E A+  ++ Q    S+ A+ T+ K++KN+     E+KF+RIRL N  FNSKV  I GG+E+M A GF++ T G+EP
Sbjct:    4 AGEVEDAIAILMGQGLDASVNAMKTVSKLVKNIIKTPEEEKFRRIRLNNQAFNSKVVSIQGGMELMQAIGFNVDTTGEEP 83          
BLAST of mRNA_Ecto-sp9_F_contig926.17422.1 vs.
Match: PUX2 (protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WM39_SYMMI)

HSP 1 Score: 73.2 bits (178), Expect = 2.670e-11
Identity = 60/176 (34.09%), Postives = 88/176 (50.00%), Query Frame = 0
Query:  149 AKQQEARTAASMGYNPYEARLMGNTA-ARAAISGA--GAPLTSPPPPDRQXXXXXXAPAEATADLGEEEKWVGEKAAMADAVAAEIEGALGAVLAQEPGVS--LTAVTTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMMAAGFSLQTDGD------EPVLQHGP 313
            AK+ E RT  S+GYNP++     N++  R  ++ A  G+ +++     +          +   +L   E  VG +A       A++  AL  +   E   S  +T V T +KM+ N+    +E KF+ IRL N NF SKV  ++GGLEVMMAAGF L    D      E  L+HGP
Sbjct:   35 AKESEQRTVESLGYNPFQPHFSSNSSEVRHQVNSATAGSSISAASSSAKLRPSQREEGGDREGELALVESQVGPEAV------AQLNEALFELAYGEADASSRMTCVDTAMKMLANIQRNPNEIKFRCIRLSNVNFRSKVAEVEGGLEVMMAAGFELSQGADGGEEDNETYLRHGP 204          
BLAST of mRNA_Ecto-sp9_F_contig926.17422.1 vs.
Match: PUB (domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X842_GLOUD)

HSP 1 Score: 65.1 bits (157), Expect = 3.960e-8
Identity = 70/255 (27.45%), Postives = 108/255 (42.35%), Query Frame = 0
Query:   80 PPQPPPMTAEAKAERREAALKAAESRTKHWDKQLNKGRQASQTKSGTGGVTENQFEDSG-------------------NAKTRRMVELAKQQEARTAASMGYNPYEARLMGNTAARA---AISGAGAPL-----TSPPPPDRQXXXXXXAPAEATADLGEEEKWVGEKAAMADAVAAEIEGALGAVLAQEPGVSLTAVTTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMMAAGFS-LQTDGDE 306
            P  PPP+T E +  RREA LKA ESRT  WDK++N  R+    +                                  +A+  +  E+   Q     A +G+NPY A    +T A     +IS   AP       +       X      P  A   +  E                   GA+  +L Q+P  ++TA  T++KM+ N+    +E+K+++IRL NA+  SK+  ++G  E++  AGFS +  DG+E
Sbjct:   68 PAAPPPLTEEEQKARREAQLKAVESRTNAWDKRVNNARKVRMQQEAEXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVLSAEEMKAFEIQNAQ-----AQVGFNPYAATFSSSTEASTVMNSISSGAAPXXXXXRVAXXXXXXXXSSFPAIPPAADPSMDLEPNGT---------------GAVYVLLRQDPVRAITAAETIIKMLNNIQNNPTEEKYRKIRLSNASIQSKLVAVNGAAEILEEAGFSKIVIDGEE 302          
BLAST of mRNA_Ecto-sp9_F_contig926.17422.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IH61_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.870e-5
Identity = 27/74 (36.49%), Postives = 47/74 (63.51%), Query Frame = 0
Query:  233 GALGAVLAQEPGVSLTAVTTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMMAAGFSLQTDGDE 306
            G L    +  P   LTA+ T+ K++ N+T+   E+K++R++ GNA F  ++GG++ G EVM+A GF  +++  E
Sbjct:   48 GNLSTTHSSSPQTHLTALQTLSKLLTNITSHPMEEKYRRVKKGNAAFQRRLGGLEKGHEVMLAVGFVEKSEEGE 121          
BLAST of mRNA_Ecto-sp9_F_contig926.17422.1 vs.
Match: PUB (domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SPC9_AUXPR)

HSP 1 Score: 54.7 bits (130), Expect = 6.640e-5
Identity = 38/121 (31.40%), Postives = 64/121 (52.89%), Query Frame = 0
Query:  230 EIEGALGAVLAQEPGVSLTAVTTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMMAAGFSLQ----TDGDEPVLQHGPCDPVPLRLTVAIRKLAQAEAMLKDSGSTARPAG 346
            E+  A+G +   +P ++    + +LK++ N+ ++  E +F+R+RL N      +   +GGL++++AAGF LQ     DG   VL+ G  D  PLR          A  ML+   +T +PAG
Sbjct:   48 ELVDAVGLLAGVDPPMASATSSLLLKLLGNVLSQPGEARFRRLRLNNPVLRGSILETEGGLDLLLAAGFQLQPGDEADGGFAVLEPG-ADLAPLRA---------ACQMLRHLNATEQPAG 158          
BLAST of mRNA_Ecto-sp9_F_contig926.17422.1 vs.
Match: WLM (domain-containing protein n=4 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4F5S4_9CHLO)

HSP 1 Score: 55.5 bits (132), Expect = 9.790e-5
Identity = 40/117 (34.19%), Postives = 65/117 (55.56%), Query Frame = 0
Query:  218 GEKAAMADAVAAEIEGALGAVLAQEPGV--SLTAVTTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMMAAGFSLQTDGDEPVLQHGPCDPVPLRLTVAIRKLAQAE 332
            G+ AA A     +  GAL  V+A       + TA+ T+  M+ N     +ED+++R+RLGNA F  +VG + GGLE++  AGF  +  G++ VL+    DP  L L ++  + A+ +
Sbjct:  621 GDLAAAAQTKLRQAWGALAQVVAAATTTEGAATALDTLETMLGNAVHFPTEDRYRRVRLGNAVFQRRVGRLPGGLELLRIAGFVEELVGEDAVLRLRRNDPGLLWLVLSAVREAREQ 737          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig926.17422.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
PDZ1.370e-20190.65domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Hypothetical8.410e-2131.21protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
PDZ2.300e-1627.48domain-containing protein n=2 Tax=Monodopsidaceae ... [more]
Hypothetical3.430e-1531.08protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 ... [more]
Hypothetical7.620e-1245.00protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
PUX22.670e-1134.09protein (Fragment) n=1 Tax=Symbiodinium microadria... [more]
PUB3.960e-827.45domain-containing protein n=1 Tax=Globisporangium ... [more]
Hypothetical2.870e-536.49protein n=1 Tax=Helicotheca tamesis TaxID=374047 R... [more]
PUB6.640e-531.40domain-containing protein n=2 Tax=Auxenochlorella ... [more]
WLM9.790e-534.19domain-containing protein n=4 Tax=Volvox africanus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.2190coord: 231..314
e-value: 8.0E-14
score: 53.0
NoneNo IPR availablePANTHERPTHR46713FAMILY NOT NAMEDcoord: 78..309
IPR018997PUB domainPFAMPF09409PUBcoord: 247..306
e-value: 8.0E-13
score: 48.1
IPR036339PUB-like domain superfamilySUPERFAMILY143503PUG domain-likecoord: 243..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig926contigEcto-sp9_F_contig926:23895..28333 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig926.17422.1mRNA_Ecto-sp9_F_contig926.17422.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig926 22759..28358 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig926.17422.1 ID=prot_Ecto-sp9_F_contig926.17422.1|Name=mRNA_Ecto-sp9_F_contig926.17422.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=349bp
MAGVRVNDTIAAIDGNASPAAHEDLVDIIRAIGRPVVIGFHRSGGGGKEA
KGAGARAQEPGPFQRAQDAARRKMDEIKGPPQPPPMTAEAKAERREAALK
AAESRTKHWDKQLNKGRQASQTKSGTGGVTENQFEDSGNAKTRRMVELAK
QQEARTAASMGYNPYEARLMGNTAARAAISGAGAPLTSPPPPDRQATTPP
PAPAEATADLGEEEKWVGEKAAMADAVAAEIEGALGAVLAQEPGVSLTAV
TTMLKMMKNMTAKSSEDKFKRIRLGNANFNSKVGGIDGGLEVMMAAGFSL
QTDGDEPVLQHGPCDPVPLRLTVAIRKLAQAEAMLKDSGSTARPAGSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018997PUB_domain
IPR036339PUB-like_dom_sf