prot_Ecto-sp9_F_contig9253.17415.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9253.17415.1
Unique Nameprot_Ecto-sp9_F_contig9253.17415.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length132
Homology
BLAST of mRNA_Ecto-sp9_F_contig9253.17415.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G697_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 5.060e-49
Identity = 96/110 (87.27%), Postives = 99/110 (90.00%), Query Frame = 0
Query:    1 DAFCLRGHVGDMTVKKAVEAVLRTKLKKKYPGLLAKRRVADTPSSTVDGAGPPDFTPPNSRASAWDSGSFTNFAIAAGASPATRGIFGAPAPAGAGPKMLTPTSVELPAG 110
            DAFCLRGHVGDMTVKKAVEAVLRTKLKKKYPGLLAK RV D PSSTVDGAGPPD +PP SRASAWDSGSF+NFAIAAGASPA  G+ GAPA  GAGPKMLT TSVELPAG
Sbjct:  667 DAFCLRGHVGDMTVKKAVEAVLRTKLKKKYPGLLAKLRVPDAPSSTVDGAGPPDLSPPKSRASAWDSGSFSNFAIAAGASPAAGGLCGAPA--GAGPKMLTLTSVELPAG 774          
BLAST of mRNA_Ecto-sp9_F_contig9253.17415.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G696_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 1.440e-32
Identity = 74/109 (67.89%), Postives = 81/109 (74.31%), Query Frame = 0
Query:    1 DAFCLRGHVGDMTVKKAVEAVLRTKLKKKYPGLLAKRRVADTPSSTVDGAGPPDFTPPNSRASAWDSGSFTNFAIAAGASPATRGIFGAPAPAGAGPKMLTPTSVELPA 109
            DAFCLRGHVG++ VKKAVEAVLRTKLKK YPGLLAKRRV D PSSTVDGAGPPD  PP SRA+AWDSGSF++   A+  S   R   GAPA A AG K    +S   PA
Sbjct:  335 DAFCLRGHVGEIAVKKAVEAVLRTKLKKNYPGLLAKRRVPDAPSSTVDGAGPPDLAPPKSRANAWDSGSFSSSGTASFPS---RNTTGAPAGAAAGSKTSGQSSAASPA 440          
BLAST of mRNA_Ecto-sp9_F_contig9253.17415.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMZ8_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 1.900e-13
Identity = 42/48 (87.50%), Postives = 43/48 (89.58%), Query Frame = 0
Query:   69 SFTNFAIAAGASPATRGIFGAPAPAGAGPKMLTPTSVELPAGTGDGAA 116
            SF NFAIAAGASPATRG+FGAP  AGA PKMLTPTSVELPAGTG GAA
Sbjct:    3 SFGNFAIAAGASPATRGVFGAPVLAGAEPKMLTPTSVELPAGTGGGAA 50          
BLAST of mRNA_Ecto-sp9_F_contig9253.17415.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWK0_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 6.170e-9
Identity = 35/55 (63.64%), Postives = 36/55 (65.45%), Query Frame = 0
Query:    1 DAFCLRGHVGDMTVKKAVEAVLRTKLKKKYPGLLAKRRVADTPSSTVDGAGPPDF 55
            DAFCLRGHVGDMTVKKAVEAVLRTKLK+K       R  A   S   D A  P F
Sbjct:   54 DAFCLRGHVGDMTVKKAVEAVLRTKLKQKV------RSKARVTSYEADAAWSPSF 102          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9253.17415.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Uncharacterized5.060e-4987.27protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.440e-3267.89protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.900e-1387.50protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized6.170e-963.64protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9253contigEcto-sp9_F_contig9253:3986..4811 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9253.17415.1mRNA_Ecto-sp9_F_contig9253.17415.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9253 3984..4811 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9253.17415.1 ID=prot_Ecto-sp9_F_contig9253.17415.1|Name=mRNA_Ecto-sp9_F_contig9253.17415.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=132bp
DAFCLRGHVGDMTVKKAVEAVLRTKLKKKYPGLLAKRRVADTPSSTVDGA
GPPDFTPPNSRASAWDSGSFTNFAIAAGASPATRGIFGAPAPAGAGPKML
TPTSVELPAGTGDGAAGASSAVGTSSAAGTSS
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