prot_Ecto-sp9_F_contig9225.17399.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9225.17399.1
Unique Nameprot_Ecto-sp9_F_contig9225.17399.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length218
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9225.17399.1 vs.
Match: Protein (HGH1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1I7_ECTSI)

HSP 1 Score: 389 bits (998), Expect = 6.920e-131
Identity = 205/217 (94.47%), Postives = 206/217 (94.93%), Query Frame = 0 
Query:    1 RQAAAATAVAASATKEGVALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQCLPFMRDLCLQLLANVTRVQVGATKLVQVGVAGGALREGQYIRRLARWLAKHPADNGLPYPELVGGSRDDARVVDRRAALRDTQADDXXXXXXXXXXXXXGRGATQKRERKGGEVLDQWQHCASVLCNAARIPEGR 217
            RQAAAATAVAASATKEGVALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQC+PFMRDLCLQLLANVTRVQVGATKL QVGVAGGALREGQYIRRLARWLAKHPADNGLPYP LVGGSRDDARVVDRRAALRDTQADDXXXX         GRGATQKRERKGGEVLDQWQHCASVLCNAARIPEGR
Sbjct:   75 RQAAAATAVAASATKEGVALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQCIPFMRDLCLQLLANVTRVQVGATKLAQVGVAGGALREGQYIRRLARWLAKHPADNGLPYPVLVGGSRDDARVVDRRAALRDTQADDXXXXE--------GRGATQKRERKGGEVLDQWQHCASVLCNAARIPEGR 283
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9225.17399.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Protein6.920e-13194.47HGH1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9225contigEcto-sp9_F_contig9225:1879..5248 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9225.17399.1mRNA_Ecto-sp9_F_contig9225.17399.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9225 1879..5248 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9225.17399.1 ID=prot_Ecto-sp9_F_contig9225.17399.1|Name=mRNA_Ecto-sp9_F_contig9225.17399.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=218bp
RQAAAATAVAASATKEGVALLHKCGAVKWLCRISGDVGTIGKDAVSCLVN
VSAEETSVAALEDMCKAGIVNRMMEAVSDEQCLPFMRDLCLQLLANVTRV
QVGATKLVQVGVAGGALREGQYIRRLARWLAKHPADNGLPYPELVGGSRD
DARVVDRRAALRDTQADDDDDDDDDDDDDDEGRGATQKRERKGGEVLDQW
QHCASVLCNAARIPEGR*
back to top