prot_Ecto-sp9_F_contig919.17370.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig919.17370.1
Unique Nameprot_Ecto-sp9_F_contig919.17370.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length167
Homology
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BLAST of mRNA_Ecto-sp9_F_contig919.17370.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P8_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 4.650e-83
Identity = 154/160 (96.25%), Postives = 155/160 (96.88%), Query Frame = 0 
Query:    1 MLANLARAAARPSAGLVRRAAAATTKCSSPSVPAAAVSSAPKNLRCASSLSEVLKAEIEEERLVALDEDVASMVKELGKKGITVKDEPGLSLVRLFGPGVGDEKVSVEFDCDVEGDGDDGWEDDLEDDSDLSVESGEQQQEKGGXXXXXXXDEDDMIGPG 160
            MLANLARAAARPSAGLVRRAAAATTKCSSPSVPAAAVSSAPKNLRCASSLSEVLKAEIEEERLVA DEDVASMVKELGKKGITVKDEPGLSLVRLFGPGVGDEKVSVEFDCDVEGDGDDGWEDDLEDDSDLS+ESGEQQQ K  XXXXXXX EDDMIGPG
Sbjct:    1 MLANLARAAARPSAGLVRRAAAATTKCSSPSVPAAAVSSAPKNLRCASSLSEVLKAEIEEERLVAFDEDVASMVKELGKKGITVKDEPGLSLVRLFGPGVGDEKVSVEFDCDVEGDGDDGWEDDLEDDSDLSLESGEQQQGKXXXXXXXXXXEDDMIGPG 160
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig919.17370.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized4.650e-8396.25protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003428Mitochondrial glycoproteinPFAMPF02330MAM33coord: 54..142
e-value: 1.2E-5
score: 25.4
IPR036561Mitochondrial glycoprotein superfamilyGENE3D3.10.280.10coord: 41..159
e-value: 2.8E-6
score: 29.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig919contigEcto-sp9_F_contig919:22236..24413 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig919.17370.1mRNA_Ecto-sp9_F_contig919.17370.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig919 22236..24413 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig919.17370.1 ID=prot_Ecto-sp9_F_contig919.17370.1|Name=mRNA_Ecto-sp9_F_contig919.17370.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=167bp
MLANLARAAARPSAGLVRRAAAATTKCSSPSVPAAAVSSAPKNLRCASSL
SEVLKAEIEEERLVALDEDVASMVKELGKKGITVKDEPGLSLVRLFGPGV
GDEKVSVEFDCDVEGDGDDGWEDDLEDDSDLSVESGEQQQEKGGEGQEDE
GDEDDMIGPGKTPVSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003428MAM33
IPR036561MAM33_sf