mRNA_Ecto-sp9_F_contig9074.17262.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig9074.17262.1 vs.
Match: 1,3-beta-glucan (synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR3_9PHAE) HSP 1 Score: 332 bits (851), Expect = 5.490e-102 Identity = 161/163 (98.77%), Postives = 163/163 (100.00%), Query Frame = 1
Query: 4 GGRDDGIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 492
GGRDDGIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKAS+GINLSEDIFAGYNGTIRGGQ+
Sbjct: 1450 GGRDDGIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASRGINLSEDIFAGYNGTIRGGQI 1612
BLAST of mRNA_Ecto-sp9_F_contig9074.17262.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X7C3_9EUKA) HSP 1 Score: 248 bits (634), Expect = 1.320e-81 Identity = 114/154 (74.03%), Postives = 138/154 (89.61%), Query Frame = 1
Query: 22 IQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIRG 483
I+ VYR++LPGNP++GEGKPENQNHA+IFTRGE +QAIDMNQEGYFEEA+KMR LLEEF +R+ +VGFREHIFTG +SS+ANYMA+QE FVTLGQRVL++PL++R+HYGHPDLFDK+F+MT GG+SKASKGINLSEDIFAG+N +RG
Sbjct: 19 IETVYRIELPGNPIIGEGKPENQNHALIFTRGEIVQAIDMNQEGYFEEAVKMRNLLEEFDRDDSRKHTTIVGFREHIFTGGLSSVANYMAMQEGCFVTLGQRVLHDPLKIRLHYGHPDLFDKLFYMTRGGISKASKGINLSEDIFAGFNTVLRG 172
BLAST of mRNA_Ecto-sp9_F_contig9074.17262.1 vs.
Match: 1,3-beta-glucan (synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B5_9STRA) HSP 1 Score: 267 bits (682), Expect = 2.890e-79 Identity = 130/163 (79.75%), Postives = 146/163 (89.57%), Query Frame = 1
Query: 10 RDDGIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARR--PAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 492
R + ++ Y +LPGNPV+GEGKPENQNHA+IFTRGEH+QAIDMNQEGYFEEA+KMRCLL+EF +R P +VGFREHIFTGSVSSLANYMALQELSFVT+GQRVL++PLR+RMHYGHPDLFDKVFFMT GG+SKASKGINLSEDIFAGYN TIRGGQV
Sbjct: 1163 RYENLRIAYIDELPGNPVIGEGKPENQNHALIFTRGEHVQAIDMNQEGYFEEAIKMRCLLQEF---LRKRDPPTTIVGFREHIFTGSVSSLANYMALQELSFVTIGQRVLDDPLRIRMHYGHPDLFDKVFFMTRGGMSKASKGINLSEDIFAGYNNTIRGGQV 1322
BLAST of mRNA_Ecto-sp9_F_contig9074.17262.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV62_9STRA) HSP 1 Score: 265 bits (677), Expect = 1.340e-78 Identity = 123/157 (78.34%), Postives = 141/157 (89.81%), Query Frame = 1
Query: 22 IQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 492
++E+YR+KLPGNPV+GEGKPENQNHA++FTRGE+L AIDMNQ+ YFEEALKMR LL+EF T P ++GFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLR R+HYGHPD+FDK+FFMT GG+SKASKGINLSEDIFAG+N +RGG V
Sbjct: 943 VEEIYRIKLPGNPVLGEGKPENQNHAVVFTRGENLMAIDMNQDNYFEEALKMRNLLQEFHKSTRDVPITILGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRQRLHYGHPDIFDKLFFMTRGGISKASKGINLSEDIFAGFNNQLRGGNV 1099
BLAST of mRNA_Ecto-sp9_F_contig9074.17262.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A3K6_9STRA) HSP 1 Score: 245 bits (625), Expect = 5.770e-78 Identity = 117/153 (76.47%), Postives = 130/153 (84.97%), Query Frame = 1
Query: 22 IQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIR 480
+ E YR++LPGNP++GEGKPENQN A+IFTRGEHLQ IDMNQ+GY EEALKMR LLEEF G RP +VG EHIFTGS+SSLANYMALQE SFVTLGQR L PLRVRMHYGHPD+F+K+FFMT GG SKASKGINLSEDIFAGYN +R
Sbjct: 167 VVECYRIRLPGNPILGEGKPENQNSAVIFTRGEHLQTIDMNQDGYLEEALKMRNLLEEFSAGN--RPCTIVGLPEHIFTGSISSLANYMALQETSFVTLGQRTLTRPLRVRMHYGHPDVFNKLFFMTRGGFSKASKGINLSEDIFAGYNNCLR 317
BLAST of mRNA_Ecto-sp9_F_contig9074.17262.1 vs.
Match: 1,3-beta-glucan (synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1M2_9STRA) HSP 1 Score: 261 bits (668), Expect = 2.240e-77 Identity = 124/159 (77.99%), Postives = 141/159 (88.68%), Query Frame = 1
Query: 19 GIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFR-GGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 492
GI+E+YRV+LPGNPV+GEGKPENQNHAMIF+RGEH+QAIDMNQEGYFE+A KMR L+EF G+ P ++GFREHIFTG+VSSLANYMALQE SFVTLGQRVLN PLR+R+HYGHPDLFDK+FFM GG+SKASKGINLSEDIFAGYN +RGG V
Sbjct: 1568 GIEEIYRVRLPGNPVLGEGKPENQNHAMIFSRGEHVQAIDMNQEGYFEDAYKMRNFLQEFALTGSPDMPTTILGFREHIFTGAVSSLANYMALQEYSFVTLGQRVLNRPLRMRLHYGHPDLFDKLFFMQNGGISKASKGINLSEDIFAGYNNLLRGGSV 1726
BLAST of mRNA_Ecto-sp9_F_contig9074.17262.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDT6_THAPS) HSP 1 Score: 253 bits (647), Expect = 2.530e-77 Identity = 120/157 (76.43%), Postives = 135/157 (85.99%), Query Frame = 1
Query: 22 IQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 492
IQE+YRV+L GNP++GEGKPENQNHAMIFTRGE +Q IDMNQEGYFEEALKMR L+EF P ++G REHIFTGSVSSLANYMALQE SFVTLGQRVL PL +R+HYGHPD+FDK+FF+T GG+SK+SKGINLSEDIFAGYN IRGGQV
Sbjct: 209 IQEIYRVRLAGNPILGEGKPENQNHAMIFTRGEFVQTIDMNQEGYFEEALKMRNALQEFAKRDGPMPITILGLREHIFTGSVSSLANYMALQETSFVTLGQRVLTKPLCIRLHYGHPDVFDKLFFITRGGISKSSKGINLSEDIFAGYNNAIRGGQV 365
BLAST of mRNA_Ecto-sp9_F_contig9074.17262.1 vs.
Match: 1,3-beta-glucan (synthase n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YPK2_PLABS) HSP 1 Score: 260 bits (664), Expect = 7.660e-77 Identity = 126/164 (76.83%), Postives = 141/164 (85.98%), Query Frame = 1
Query: 1 VGGRDDGIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 492
VGG D IQEVYR+KLPGNP+VGEGKPENQNHA+IFTRGE +Q IDMNQ+ YFEEALKMR LL+EF GG+ RP +VGF EHIFT +SS+ANYMALQE FVTLGQRVL NPLR+RMHYGHPDLFDK F +T GG+SKAS+GINLSEDIFAGYN T+RGG V
Sbjct: 1384 VGGTDL-IQEVYRIKLPGNPIVGEGKPENQNHAIIFTRGEMVQTIDMNQDAYFEEALKMRNLLQEFDGGSPDRPVTIVGFAEHIFTSRLSSIANYMALQEGVFVTLGQRVLANPLRIRMHYGHPDLFDKTFHLTRGGISKASRGINLSEDIFAGYNTTLRGGSV 1546
BLAST of mRNA_Ecto-sp9_F_contig9074.17262.1 vs.
Match: 1,3-beta-glucan (synthase n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RK18_9EUKA) HSP 1 Score: 259 bits (661), Expect = 1.940e-76 Identity = 122/157 (77.71%), Postives = 138/157 (87.90%), Query Frame = 1
Query: 22 IQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARRPAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 492
IQEVYR+KLPGNP+VGEGKPENQNHA+IFTRGE LQ +DMNQ+ YFEEALKMR +L+EF GTA RP +VGF EHIFT +SS+ANYMALQE FVTLGQRVL NPLR+RMHYGHPD+FDK+F +T GGVSKAS+GINLSEDIFAGYN T+RGG V
Sbjct: 1344 IQEVYRIKLPGNPIVGEGKPENQNHAVIFTRGEMLQTVDMNQDAYFEEALKMRNMLQEFDQGTADRPITIVGFAEHIFTSRLSSIANYMALQEGVFVTLGQRVLANPLRIRMHYGHPDVFDKIFHLTRGGVSKASRGINLSEDIFAGYNTTLRGGSV 1500
BLAST of mRNA_Ecto-sp9_F_contig9074.17262.1 vs.
Match: 1,3-beta-glucan (synthase (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVX6_9STRA) HSP 1 Score: 258 bits (660), Expect = 2.640e-76 Identity = 126/159 (79.25%), Postives = 138/159 (86.79%), Query Frame = 1
Query: 22 IQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEGYFEEALKMRCLLEEFRGGTARR--PAVVVGFREHIFTGSVSSLANYMALQELSFVTLGQRVLNNPLRVRMHYGHPDLFDKVFFMTAGGVSKASKGINLSEDIFAGYNGTIRGGQV 492
I+E+YRV+LPGNPV+GEGKPENQNHA+IFTRGE LQ IDMNQEG+FEEALKMR LL+EF G P +VGFREHIFTGSVSSLANYMALQE SFVTLGQRVLN PL R+HYGHPD+FDK+FFMT GGVSKASKGINLSEDIFAGYN +RGG V
Sbjct: 1387 IEEIYRVRLPGNPVIGEGKPENQNHAVIFTRGEMLQTIDMNQEGFFEEALKMRNLLQEFDHGKGSEGMPTTIVGFREHIFTGSVSSLANYMALQETSFVTLGQRVLNKPLCSRLHYGHPDVFDKLFFMTRGGVSKASKGINLSEDIFAGYNNLVRGGGV 1545 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9074.17262.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig9074.17262.1 >prot_Ecto-sp9_F_contig9074.17262.1 ID=prot_Ecto-sp9_F_contig9074.17262.1|Name=mRNA_Ecto-sp9_F_contig9074.17262.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=193bp VGGRDDGIQEVYRVKLPGNPVVGEGKPENQNHAMIFTRGEHLQAIDMNQEback to top mRNA from alignment at Ecto-sp9_F_contig9074:755..2440- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig9074.17262.1 ID=mRNA_Ecto-sp9_F_contig9074.17262.1|Name=mRNA_Ecto-sp9_F_contig9074.17262.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1686bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9074:755..2440- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9074:755..2440- >mRNA_Ecto-sp9_F_contig9074.17262.1 ID=mRNA_Ecto-sp9_F_contig9074.17262.1|Name=mRNA_Ecto-sp9_F_contig9074.17262.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1158bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9074:755..2440- (Ectocarpus species9 EcSCA_722f female)back to top |