prot_Ecto-sp9_F_contig8965.17156.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8965.17156.1
Unique Nameprot_Ecto-sp9_F_contig8965.17156.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length254
Homology
BLAST of mRNA_Ecto-sp9_F_contig8965.17156.1 vs.
Match: Mitochondrial (import inner membrane translocase subunit TIM50 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI3_ECTSI)

HSP 1 Score: 468 bits (1204), Expect = 1.070e-161
Identity = 237/254 (93.31%), Postives = 239/254 (94.09%), Query Frame = 0
Query:    1 YSSPVKDKLLLDCPLPPGALPPPTLVLDLEGTLLGTIYTRKKGWRVAKRPGLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDPQGTISQRVYRDGTRYIDGKYVKDLSALNRPLEQTLIIDDNADCISMQPENAIKVKAFSLDDGSDPTADTTLYDLAPFLRALATQGVADFRDVLRPHVGEDSNAVVADFRSKVNAVRQKEDAEKNKGLGGLVRQIXXXXXXXXXXXXXXGMLTSKDIVGDAPETLSPGMA 254
            YSSPVKDKLLLDCPLPPGALPPPTLVLDLEGTLLGTIYTRKKGWRVAKRPGLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDPQGTISQRVYRDGTRYIDGKYVKDLSALNRPLEQTLIIDDNADCISMQPENAIKVKAFSL+DGSDPTADT LYDLAPFLRALATQGVADFRDVLRPHVGEDSNAVVADFRSKVNAVRQKEDAEK+KGLGGLVRQI              GMLTSKDIVGDAPETLSPGMA
Sbjct:  220 YSSPVKDKLLLDCPLPPGALPPPTLVLDLEGTLLGTIYTRKKGWRVAKRPGLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDPQGTISQRVYRDGTRYIDGKYVKDLSALNRPLEQTLIIDDNADCISMQPENAIKVKAFSLEDGSDPTADTALYDLAPFLRALATQGVADFRDVLRPHVGEDSNAVVADFRSKVNAVRQKEDAEKSKGLGGLVRQIAPVVGAGGPAAGMGGMLTSKDIVGDAPETLSPGMA 473          
BLAST of mRNA_Ecto-sp9_F_contig8965.17156.1 vs.
Match: Mitochondrial (import inner membrane translocase subunit TIM50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ2_9STRA)

HSP 1 Score: 217 bits (553), Expect = 1.660e-64
Identity = 118/265 (44.53%), Postives = 162/265 (61.13%), Query Frame = 0
Query:    1 YSSPVKDKLLLDCP---LPPGALPPPTLVLDLEGTLLGTIYTRKKGWRVAKRPGLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDP-----------QGTISQRVYRDGTRYIDGKYVKDLSALNRPLEQTLIIDDNADCISMQPENAIKVKAFSLDDGSDPTADTTLYDLAPFLRALATQGVADFRDVLRPHVGEDSNAVVADFRSKVNAVRQKEDAEKNKGLGGLVRQIXXXXXXXXXXXXXXGML-TSKDIVGDAPETLS 250
            ++ P  DKLL D P   LPP    PPTLVLDLE TL+   + R+ GWRVA+RPG++ FL+EMS  YEIV+FT +  G A+  +T +DP            G  S R+YRD T + +G +VKDLS +NR ++  +IIDD  +   +QP+N I++K + +  G DP ADT L DL PFLRALA +GV D+R+VLRP  G+DS+AVVA++R +V+A    +    N GLGGL+R                  + +S+D+VG AP   S
Sbjct:  137 FTEPSSDKLLPDWPPSELPPDTPCPPTLVLDLENTLVHMDWHRRTGWRVARRPGVEEFLREMSMYYEIVIFTSAHVGSAEPIVTSLDPAVSRARGVEVSSGYTSHRLYRDATLFSNGTHVKDLSKINRDMKHVIIIDDEPEAFQLQPDNGIRIKPYEIKPGEDPHADTALTDLIPFLRALAMEGVRDYRNVLRPFRGQDSDAVVAEYRRRVDAANAAQRERDNSGLGGLLRGAKRGHLVPDAQPTRRSAIPSSRDLVGAAPADAS 401          
BLAST of mRNA_Ecto-sp9_F_contig8965.17156.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDJ8_PYTOL)

HSP 1 Score: 178 bits (451), Expect = 2.150e-50
Identity = 102/224 (45.54%), Postives = 143/224 (63.84%), Query Frame = 0
Query:    1 YSSPVKDKLLLDCPLP---PGALPPPTLVLDLEGTLLGTIYTRKKGWRVAKRPGLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDPQGTISQRVYRDGTRYIDGKYVKDLSALNRPLEQTLIIDDNADCISMQPENAIKVKAFSLDDGSDPTADTTLYDLAPFLRALATQGVADFRDVLRPHVGEDSNAVVADFRSK----VNAVRQKEDAEKNKGLGGLVR 217
            Y+ P K+KLL D P+P   P   P P LVLDLE TL+ + ++RK GWR AKRPG+D FL+ ++Q YEIVVF+ +   +A+E + ++D +  +   + R+ TRY +  +VKDLS LNR L Q +IIDD+     +QP+NAI +KA++  DG D   D  L DL PFL+ALA++ V DFR VL     ED   V+ D  +K    V A+  +++ EK KGLGG +R
Sbjct:  143 YTEPSKEKLLPDWPIPQVPPDTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLEALAQYYEIVVFSQNHMYMAEEILVKLDRKQNVLHLLARESTRYFNSAHVKDLSKLNRDLRQVVIIDDDPSAYQLQPDNAIPIKAYT--DGRD-RGDHELKDLIPFLKALASERVGDFRSVLAEFRDEDG--VIRDLPTKYGARVRALEMQKEQEKQKGLGGFIR 361          
BLAST of mRNA_Ecto-sp9_F_contig8965.17156.1 vs.
Match: Mitochondrial (import inner membrane translocase subunit TIM50 (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4U5_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.210e-49
Identity = 105/226 (46.46%), Postives = 146/226 (64.60%), Query Frame = 0
Query:    1 YSSPVKDKLLLDCPLP--PGALPP-PTLVLDLEGTLLGTIYTRKKGWRVAKRPGLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDPQGTISQRVYRDGTRYIDGKYVKDLSALNRPLEQTLIIDDNADCISMQPENAIKVKAFSLDDGSDPTADTTLYDLAPFLRALATQGVADFRDVLRPHVGE--DSNAVVADFRSK----VNAVRQKEDAEKNKGLGGLVR 217
            ++ P + KLL D P+P  P   PP P LVLDLE TL+ + ++RK GWR AKRPG+D FL+ + Q YEIV+F+ + G  A+E +T++DP+      + RD TRY++G +VKDL+ LNR L Q +I+DD+     +QPENAI +K F+  DG D   D  L DL PFL+ALA++ V DFR V    +GE  D + V+ D  SK    V+A+  +++ EK KG GG VR
Sbjct:  152 FTDPSRQKLLPDWPIPQVPADTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQYYEIVIFSQNYG--AEEIVTKLDPKQCALHCLSRDSTRYLNGAHVKDLANLNRDLRQVVILDDDPAAYQLQPENAIPIKPFT--DGRD-REDHELKDLIPFLKALASERVPDFRSV----IGEFRDDDGVIRDVASKYGARVHAMEMQKEQEKRKGFGGFVR 368          
BLAST of mRNA_Ecto-sp9_F_contig8965.17156.1 vs.
Match: Mitochondrial (import inner membrane translocase subunit TIM50 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GPP0_9STRA)

HSP 1 Score: 175 bits (443), Expect = 9.950e-49
Identity = 88/223 (39.46%), Postives = 141/223 (63.23%), Query Frame = 0
Query:    1 YSSPVKDKLLLDCP----LPPGALPPPTLVLDLEGTLLGTIYTRKKGWRVAKRPGLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDPQGTISQRVYRDGTRYIDGKYVKDLSALNRPLEQTLIIDDNADCISMQPENAIKVKAFSLDDGSDPTADTTLYDLAPFLRALATQGVADFRDVLRPHVGEDSNAVVADFRSKVNAVRQKEDAEKNKGLGGLVRQI 219
            ++ P++ KLL D P    +P     PPTLVLDLEGTL+ + + R+ GWR AKRPG+D FL++M+Q YEIV+F+++   + +  +  +DP+     ++ R+ TRY +G Y+KDLS LNR L++ +IIDD+    S+QPEN I + AF     +    DT+L+D+  FL AL  +GV DF  +L      ++  +  ++ SK+  ++ +E+  +N+GLG LV+ +
Sbjct:  113 FTEPIRQKLLPDWPFFPNIPADTPCPPTLVLDLEGTLVKSTWDRRHGWRHAKRPGVDKFLQDMAQYYEIVLFSNNTASIVEPIMMSLDPENVCWHKLTREATRYENGVYIKDLSHLNRSLKKMVIIDDDEQAFSLQPENGIHINAFK---NARDKNDTSLHDIGKFLAALVHEGVEDFPALLSTFKSRNAEDISNEYLSKLRTIKDREEENRNRGLGRLVKSL 332          
BLAST of mRNA_Ecto-sp9_F_contig8965.17156.1 vs.
Match: FCP1 (homology domain-containing protein n=1 Tax=Nitrososphaeria archaeon TaxID=2268198 RepID=A0A7J3D5D1_9ARCH)

HSP 1 Score: 169 bits (429), Expect = 3.720e-48
Identity = 91/213 (42.72%), Postives = 136/213 (63.85%), Query Frame = 0
Query:    1 YSSPVKDKLLLDCPLPPGALPPPTLVLDLEGTLLGTIYTRKKGWRVAKRPGLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDPQGTISQRVYRDGTRYIDGKYVKDLSALNRPLEQTLIIDDNADCISMQPENAIKVKAFSLDDGSDPTADTTLYDLAPFLRALATQGVADFRDVLRPHVGEDSNAVVADFRSKVNAVRQKEDAEKNKGLG 213
            Y+ P  D+LL D  LPP A    TLVLDL+  L+ + +TR +GWR  KRPG++ FLK+M+Q YE+VV+T  +   AD  + ++DPQ  +  R+YRD TRY++GK+V+DLS LNR L+Q L+I  + D  ++QPENAIK+  ++    ++ + DTTL DL PFL A+    V D RDV+R +   D   +   FR ++  V++ +   ++ G G
Sbjct:   73 YADPPSDRLLPD--LPPHARHIKTLVLDLDDVLIHSDWTRARGWRTFKRPGVEDFLKDMAQYYELVVYTSQLPTYADPILDRLDPQRLLQYRLYRDSTRYVNGKHVRDLSMLNRDLKQVLLITASPDAYALQPENAIKLDKWT----TEKSDDTTLIDLLPFLEAIVRTSVTDVRDVVRSY---DGQYIPTAFRERMAKVQEAKLRRQSSGKG 276          
BLAST of mRNA_Ecto-sp9_F_contig8965.17156.1 vs.
Match: Mitochondrial (import inner membrane translocase subunit TIM50 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G064_9STRA)

HSP 1 Score: 174 bits (441), Expect = 5.380e-48
Identity = 101/258 (39.15%), Postives = 154/258 (59.69%), Query Frame = 0
Query:    1 YSSPVKDKLLLDCPLP--PGALP-PPTLVLDLEGTLLGTIYTRKKGWRVAKRPGLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDPQGTISQRVYRDGTRYIDGKYVKDLSALNRPLEQTLIIDDNADCISMQPENAIKVKAFSLDDGSDPT--ADTTLYDLAPFLRALATQGVADFRDVLRPHVGEDSNAVVADFRSKVNAVRQKEDAEKNKGLGGLVRQIXXXXXXXXXXXXXXGM-------LTSKDIVGDAP 246
            ++ P  DKLL D P+P  P  LP P TLVLDLE TL+ + + RK GWR AKRPG+D FL++M+Q YEIV++T ++ G+A+  I  +D Q  I   +YR+ TR+IDG +VKDLS+LNR +++ + ID++   + + P+N I+VK ++     DP    D TL  + P L  +  +G  D   +LR + G D++ +V  ++S+V+ +R+  D   + GLG L ++                M       +TSKD+VGDAP
Sbjct:  152 FTKPHADKLLPDWPMPNVPPDLPCPHTLVLDLENTLVSSTWDRKHGWRHAKRPGVDQFLRKMAQYYEIVLYTSTIQGVAEPVIQNLDKQQAIMHALYRESTRFIDGVHVKDLSSLNRNVKKIIAIDNDEKALQLHPDNLIRVKPYT-----DPRNRTDDTLEKIMPILIEIVNKGYDDIPAILRQYRGMDADEIVEHYQSRVDEIRKNRDQIYSSGLGWLNQRRNNPMPEPELPPASSSMRPSGTPAITSKDLVGDAP 404          
BLAST of mRNA_Ecto-sp9_F_contig8965.17156.1 vs.
Match: Mitochondrial (import inner membrane translocase subunit TIM50 n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KV46_9STRA)

HSP 1 Score: 171 bits (433), Expect = 1.220e-47
Identity = 104/226 (46.02%), Postives = 146/226 (64.60%), Query Frame = 0
Query:    1 YSSPVKDKLLLDCPLP--PGALPP-PTLVLDLEGTLLGTIYTRKKGWRVAKRPGLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDPQGTISQRVYRDGTRYIDGKYVKDLSALNRPLEQTLIIDDNADCISMQPENAIKVKAFSLDDGSDPTADTTLYDLAPFLRALATQGVADFRDVLRPHVGE--DSNAVVADFRSK----VNAVRQKEDAEKNKGLGGLVR 217
            ++ P + KLL D P+P  P   PP P LVLDLE TL+ + ++RK GWR AKRPG+D FL+ + Q YEIV+F+ + G  A+E + ++DP+      + RD TRY++G +VKDLS+LNR L+Q +I+DD+     +QPENAI VK F+  +G D   D  L DL PFL+ALA++ V DFR+V    +GE  D + VV D  SK    V+ +  ++  +K KG GG VR
Sbjct:  141 FTDPSRLKLLPDWPIPQVPADTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQYYEIVIFSQNYG--AEEIVQKLDPKQCALHILSRDATRYLNGAHVKDLSSLNRDLQQVVILDDDPAAYQLQPENAIPVKPFT--NGRDRD-DHELKDLIPFLKALASERVPDFRNV----IGEFRDEDGVVRDLASKYGARVHQLEMQKQQQKKKGFGGFVR 357          
BLAST of mRNA_Ecto-sp9_F_contig8965.17156.1 vs.
Match: Mitochondrial (import inner membrane translocase subunit TIM50 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIV8_GLOUD)

HSP 1 Score: 171 bits (432), Expect = 1.330e-47
Identity = 99/224 (44.20%), Postives = 141/224 (62.95%), Query Frame = 0
Query:    1 YSSPVKDKLLLDCPLP--PGALPP-PTLVLDLEGTLLGTIYTRKKGWRVAKRPGLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDPQGTISQRVYRDGTRYIDGKYVKDLSALNRPLEQTLIIDDNADCISMQPENAIKVKAFSLDDGSDPTADTTLYDLAPFLRALATQGVADFRDVLRPHVGEDSNAVVAD----FRSKVNAVRQKEDAEKNKGLGGLVR 217
            ++ P ++KLL D P+P  P   PP P LVLDLE TL+ + ++RK GWR AKRPG+D FL+ + Q YEIV+F  S   +A+E + ++DP+      + RD TRY+ G +VKDL+ LNR L Q +I+DD+     +QPENAI +K F+     D   D  L +L PFL+ALA++ V DFR VL     ED   V+ D    + ++V A+  +++ EK KGLGG +R
Sbjct:  140 FTDPSREKLLPDWPIPQVPADTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQYYEIVIF--SQNPMAEEVVMKLDPKQCALHILSRDATRYLKGAHVKDLANLNRDLRQVVIVDDDPAAYQLQPENAIPIKPFTNGSARD---DRELTELIPFLKALASERVPDFRTVLGEFRDEDG--VIRDLPSRYSARVRALEMQKEQEKQKGLGGFIR 356          
BLAST of mRNA_Ecto-sp9_F_contig8965.17156.1 vs.
Match: Queuosine (salvage protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJH2_PYTIN)

HSP 1 Score: 176 bits (446), Expect = 2.990e-47
Identity = 101/222 (45.50%), Postives = 142/222 (63.96%), Query Frame = 0
Query:    1 YSSPVKDKLLLDCPLP---PGALPPPTLVLDLEGTLLGTIYTRKKGWRVAKRPGLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDPQGTISQRVYRDGTRYIDGKYVKDLSALNRPLEQTLIIDDNADCISMQPENAIKVKAFSLDDGSDPTADTTLYDLAPFLRALATQGVADFRDVLRPHVGEDS--NAVVADFRSKVNAVRQKEDAEKNKGLGGLVR 217
            ++ P KDKLL D P+P   P   P P LVLDLE TL+ + ++RK GWR AKRPG+D FL+ ++Q YEIVVF+++   +AD+ +T++D + T+   + R+ TRY +G +VKDLS LNR L   +IIDD+     +QPENAI +K +   DG D   D  L DL PFL+ALA++ + DFR VL     ED     + A + S+V A   ++  E+ KGLGG +R
Sbjct:  479 WTEPSKDKLLPDWPIPQVPPDTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLAQYYEIVVFSNNHQFMADDVVTRLDRKQTVLHILARESTRYYNGAHVKDLSKLNRDLRHVVIIDDDPLAYQLQPENAIPIKPYM--DGRDRD-DHELKDLIPFLKALASERIPDFRTVLAEFRDEDGVVRDLPAKYASRVRAQELQQQQERQKGLGGFLR 697          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8965.17156.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Mitochondrial1.070e-16193.31import inner membrane translocase subunit TIM50 n=... [more]
Mitochondrial1.660e-6444.53import inner membrane translocase subunit TIM50 n=... [more]
Uncharacterized2.150e-5045.54protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Mitochondrial1.210e-4946.46import inner membrane translocase subunit TIM50 (F... [more]
Mitochondrial9.950e-4939.46import inner membrane translocase subunit TIM50 n=... [more]
FCP13.720e-4842.72homology domain-containing protein n=1 Tax=Nitroso... [more]
Mitochondrial5.380e-4839.15import inner membrane translocase subunit TIM50 n=... [more]
Mitochondrial1.220e-4746.02import inner membrane translocase subunit TIM50 n=... [more]
Mitochondrial1.330e-4744.20import inner membrane translocase subunit TIM50 n=... [more]
Queuosine2.990e-4745.50salvage protein (Fragment) n=1 Tax=Pythium insidio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004274FCP1 homology domainSMARTSM00577forpap2coord: 21..149
e-value: 9.2E-37
score: 138.1
IPR004274FCP1 homology domainPFAMPF03031NIFcoord: 24..175
e-value: 4.2E-41
score: 140.3
IPR004274FCP1 homology domainPROSITEPS50969FCP1coord: 18..166
score: 36.548
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 7..199
e-value: 6.3E-56
score: 190.5
IPR027111Mitochondrial import inner membrane translocase subunit Tim50PANTHERPTHR12210:SF3MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM50coord: 7..193
NoneNo IPR availablePANTHERPTHR12210NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATEDcoord: 7..193
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 13..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8965contigEcto-sp9_F_contig8965:612..3329 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8965.17156.1mRNA_Ecto-sp9_F_contig8965.17156.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8965 612..3330 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8965.17156.1 ID=prot_Ecto-sp9_F_contig8965.17156.1|Name=mRNA_Ecto-sp9_F_contig8965.17156.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=254bp
YSSPVKDKLLLDCPLPPGALPPPTLVLDLEGTLLGTIYTRKKGWRVAKRP
GLDAFLKEMSQLYEIVVFTDSMGGLADEWITQMDPQGTISQRVYRDGTRY
IDGKYVKDLSALNRPLEQTLIIDDNADCISMQPENAIKVKAFSLDDGSDP
TADTTLYDLAPFLRALATQGVADFRDVLRPHVGEDSNAVVADFRSKVNAV
RQKEDAEKNKGLGGLVRQIGPVVGAGGPAAGMGGMLTSKDIVGDAPETLS
PGMA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004274FCP1_dom
IPR023214HAD_sf
IPR027111Tim50
IPR036412HAD-like_sf