prot_Ecto-sp9_F_contig8924.17113.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8924.17113.1
Unique Nameprot_Ecto-sp9_F_contig8924.17113.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length111
Homology
BLAST of mRNA_Ecto-sp9_F_contig8924.17113.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR0_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 6.560e-69
Identity = 104/110 (94.55%), Postives = 104/110 (94.55%), Query Frame = 0
Query:    1 MSSLTSLPVSVTSRRPLEACAAFLRGTRPALHEPGAMVPAACCVLGAWLGAIPLCLDWEQPWQAWPLPMCAGGLLGFSLGCLLLLGYQILENVSRAFSVWSSEWRAEKCA 110
            MSS TSLPVSVTS RPLEA AAFLRGTRPALHE GAMVPAACCVLGAWLGAIPLCLDWEQPWQAWPLPMCAGGLLGFSLGCLLLLGYQILENVSRA SVWSSEWRAEK A
Sbjct:  136 MSSFTSLPVSVTSHRPLEAFAAFLRGTRPALHELGAMVPAACCVLGAWLGAIPLCLDWEQPWQAWPLPMCAGGLLGFSLGCLLLLGYQILENVSRAVSVWSSEWRAEKRA 245          
BLAST of mRNA_Ecto-sp9_F_contig8924.17113.1 vs.
Match: Phosphatidylinositol (glycan anchor biosynthesis, class F n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RV09_PETMA)

HSP 1 Score: 70.1 bits (170), Expect = 5.470e-13
Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 0
Query:   23 FLRGTRPALHEPGAMVPAACCVLGAWLGAIPLCLDWEQPWQAWPLPMCAGGLLGFSLGCLLLL 85
            F R    ++ E G  V   C ++GAWLGA+P+ LDW++PWQAWP+    G + G++LG LL L
Sbjct:   63 FTRSGAVSVWEQGLCVGTMCTLMGAWLGALPIPLDWDRPWQAWPITCSMGAICGYALGLLLSL 125          
BLAST of mRNA_Ecto-sp9_F_contig8924.17113.1 vs.
Match: phosphatidylinositol-glycan (biosynthesis class F protein-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142579EF)

HSP 1 Score: 70.9 bits (172), Expect = 1.850e-12
Identity = 37/101 (36.63%), Postives = 54/101 (53.47%), Query Frame = 0
Query:    1 MSSLTSLPVSVTSRRPLEACAAFLRGTRPALHEPGAMVPAACCVLGAWLGAIPLCLDWEQPWQAWPLPMCAGGLLGFSLGCLLLL---GYQILENVSRAFS 98
            +S+L SLP  + +    EA   F+ G      E   M  A C +LGAW+GA+P+ LDW++PWQ WP+    G ++G   G LL     G+ +L+   R  S
Sbjct:  148 VSTLVSLPCLLVNELDYEAWNRFISGCCLPGVESYVMTVACCSLLGAWVGAVPIPLDWDRPWQVWPISCSIGVVIGHGTGLLLCTAHAGFNVLQQFRRGKS 248          
BLAST of mRNA_Ecto-sp9_F_contig8924.17113.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1UUN6_RAMVA)

HSP 1 Score: 70.1 bits (170), Expect = 2.930e-12
Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 0
Query:   33 EPGAMVPAACCVLGAWLGAIPLCLDWEQPWQAWPLPMCAGGLLGFSLGCLLLLGYQILENVSRAFS 98
            E   + P    V+GAW GA+ + LDW++PWQAWP+P C G   G+++G LL +   I  ++ R +S
Sbjct:  157 EKAPLFPGMLAVVGAWCGAVVIPLDWDRPWQAWPIPCCYGAFAGYAVGHLLFISASITRSLPRRYS 222          
BLAST of mRNA_Ecto-sp9_F_contig8924.17113.1 vs.
Match: phosphatidylinositol-glycan (biosynthesis class F protein n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014031A22)

HSP 1 Score: 69.7 bits (169), Expect = 3.520e-12
Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 0
Query:   23 FLRGTRPALHEPGAMVPAACCVLGAWLGAIPLCLDWEQPWQAWPLPMCAGGLLGFSLGCLLLL 85
            F R    ++ E G  V   C ++GAWLGA+P+ LDW++PWQAWP+    G + G++LG LL L
Sbjct:  145 FTRSGAVSVWEQGLCVGTMCTLMGAWLGALPIPLDWDRPWQAWPITCSMGAVCGYALGLLLSL 207          
BLAST of mRNA_Ecto-sp9_F_contig8924.17113.1 vs.
Match: phosphatidylinositol-glycan (biosynthesis class F protein-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P5A801_BRABE)

HSP 1 Score: 68.9 bits (167), Expect = 6.300e-12
Identity = 33/83 (39.76%), Postives = 47/83 (56.63%), Query Frame = 0
Query:    1 MSSLTSLPVSVTSRRPLEACAAFLRGTRPALHEPGAMVPAACCVLGAWLGAIPLCLDWEQPWQAWPLPMCAGGLLGFSLGCLL 83
            M++LT+LP        LE   A +     + +E        C V+GAWLGA P+ LDW++PWQ WP+P   G LLG ++G +L
Sbjct:  119 MATLTALPCWCMLGSRLETWVAVVLNRPESENESFLQTTVLCTVVGAWLGAFPIPLDWDRPWQVWPIPCSIGALLGHTVGLVL 201          
BLAST of mRNA_Ecto-sp9_F_contig8924.17113.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z3M2_BRAFL)

HSP 1 Score: 65.5 bits (158), Expect = 3.460e-11
Identity = 33/83 (39.76%), Postives = 45/83 (54.22%), Query Frame = 0
Query:    1 MSSLTSLPVSVTSRRPLEACAAFLRGTRPALHEPGAMVPAACCVLGAWLGAIPLCLDWEQPWQAWPLPMCAGGLLGFSLGCLL 83
            M++LT+LP        LE   A +     +  E        C V+GAWLGA P+ LDW++PWQ WP+P   G LLG + G +L
Sbjct:   44 MATLTALPCWCMLGSRLETWVAVVLNRPESEIESFLQTTVLCTVVGAWLGAFPIPLDWDRPWQVWPIPCSIGALLGHTGGLVL 126          
BLAST of mRNA_Ecto-sp9_F_contig8924.17113.1 vs.
Match: GPI (biosynthesis protein family Pig-F-domain-containing protein n=1 Tax=Suillus subaureus TaxID=48587 RepID=UPI001C02083E)

HSP 1 Score: 67.4 bits (163), Expect = 4.840e-11
Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
Query:   33 EPGAMVPAACCVLGAWLGAIPLCLDWEQPWQAWPLPMCAGGLLGFSLGCLLLL 85
            E   + PA   +LGAWLGA+P+ LDW++PWQ WPL    GG+ G+ +G LL L
Sbjct:  211 EKALVYPAVATLLGAWLGALPIALDWDRPWQTWPLTPLFGGIAGYIIGSLLAL 263          
BLAST of mRNA_Ecto-sp9_F_contig8924.17113.1 vs.
Match: GPI (biosynthesis protein family Pig-F-domain-containing protein n=2 Tax=Suillus subalutaceus TaxID=48586 RepID=UPI001B87E9DB)

HSP 1 Score: 67.4 bits (163), Expect = 5.420e-11
Identity = 30/68 (44.12%), Postives = 41/68 (60.29%), Query Frame = 0
Query:   33 EPGAMVPAACCVLGAWLGAIPLCLDWEQPWQAWPLPMCAGGLLGFSLGCLLLLGYQIL-----ENVSR 95
            E   + PA   +LGAWLGA+P+ LDW++PWQAWPL    GG+ G+ +G L  +    L     EN+ R
Sbjct:  220 ERALVYPAVASLLGAWLGALPIALDWDRPWQAWPLTPLFGGIAGYIVGSLSAISVSTLKWLTEENIRR 287          
BLAST of mRNA_Ecto-sp9_F_contig8924.17113.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hydnomerulius pinastri MD-312 TaxID=994086 RepID=A0A0C9W1H4_9AGAM)

HSP 1 Score: 67.4 bits (163), Expect = 5.540e-11
Identity = 28/59 (47.46%), Postives = 38/59 (64.41%), Query Frame = 0
Query:   33 EPGAMVPAACCVLGAWLGAIPLCLDWEQPWQAWPLPMCAGGLLGFSLGCLLLLGYQILE 91
            E   + PA   V G+WLGAIP+ LDW++PWQAWPL    G LLG+ +G  L  G+  ++
Sbjct:  224 ERSMVYPAVGVVAGSWLGAIPIALDWDRPWQAWPLTPLFGSLLGYIVGATLAFGFSAVK 282          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8924.17113.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized6.560e-6994.55protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Phosphatidylinositol5.470e-1346.03glycan anchor biosynthesis, class F n=1 Tax=Petrom... [more]
phosphatidylinositol-glycan1.850e-1236.63biosynthesis class F protein-like n=1 Tax=Anneissi... [more]
Uncharacterized2.930e-1240.91protein n=1 Tax=Ramazzottius varieornatus TaxID=94... [more]
phosphatidylinositol-glycan3.520e-1246.03biosynthesis class F protein n=1 Tax=Petromyzon ma... [more]
phosphatidylinositol-glycan6.300e-1239.76biosynthesis class F protein-like n=3 Tax=Branchio... [more]
Uncharacterized3.460e-1139.76protein (Fragment) n=1 Tax=Branchiostoma floridae ... [more]
GPI4.840e-1150.94biosynthesis protein family Pig-F-domain-containin... [more]
GPI5.420e-1144.12biosynthesis protein family Pig-F-domain-containin... [more]
Uncharacterized5.540e-1147.46protein n=1 Tax=Hydnomerulius pinastri MD-312 TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009580GPI biosynthesis protein Pig-FPFAMPF06699PIG-Fcoord: 1..83
e-value: 5.9E-19
score: 68.9
NoneNo IPR availablePANTHERPTHR43157FAMILY NOT NAMEDcoord: 1..86
NoneNo IPR availablePANTHERPTHR43157:SF12PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEINcoord: 1..86
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 57..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 91..110
NoneNo IPR availableTMHMMTMhelixcoord: 65..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8924contigEcto-sp9_F_contig8924:2496..4200 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8924.17113.1mRNA_Ecto-sp9_F_contig8924.17113.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8924 1913..5040 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8924.17113.1 ID=prot_Ecto-sp9_F_contig8924.17113.1|Name=mRNA_Ecto-sp9_F_contig8924.17113.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=111bp
MSSLTSLPVSVTSRRPLEACAAFLRGTRPALHEPGAMVPAACCVLGAWLG
AIPLCLDWEQPWQAWPLPMCAGGLLGFSLGCLLLLGYQILENVSRAFSVW
SSEWRAEKCA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009580GPI_biosynthesis_protein_Pig-F