prot_Ecto-sp9_F_contig892.17108.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig892.17108.1
Unique Nameprot_Ecto-sp9_F_contig892.17108.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length106
Homology
BLAST of mRNA_Ecto-sp9_F_contig892.17108.1 vs.
Match: Transcription (elongation factor 1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVV5_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 1.140e-70
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
Query:    1 MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCRMCDVNYEMTINYLTEPIDVYTDWIDECEAVNAVDAAAEEHKDDEQFIDDQEIAEG 105
            MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCRMCDVNYEMTINYLTEPIDVYTDWIDECEAVNAVDAAAEEHKDDEQFIDDQEIAEG
Sbjct:    1 MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCRMCDVNYEMTINYLTEPIDVYTDWIDECEAVNAVDAAAEEHKDDEQFIDDQEIAEG 105          
BLAST of mRNA_Ecto-sp9_F_contig892.17108.1 vs.
Match: Transcription (elongation factor 1 homolog n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U4B4_9STRA)

HSP 1 Score: 109 bits (273), Expect = 2.510e-29
Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = 0
Query:    1 MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCRMCDVNYEMTINYLTEPIDVYTDWIDECEAVNA 82
            MGRRK STKKIV +K   + +VFKCPFC+HD  V+C M++      L CR+C  +Y+  INYL+EPIDVYTDWIDECEA+++
Sbjct:    1 MGRRKTSTKKIVTRKKQVVARVFKCPFCSHDDSVQCKMDRDRNVGHLTCRICSESYQSNINYLSEPIDVYTDWIDECEALHS 82          
BLAST of mRNA_Ecto-sp9_F_contig892.17108.1 vs.
Match: Transcription (elongation factor 1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT2_9STRA)

HSP 1 Score: 110 bits (274), Expect = 4.870e-29
Identity = 52/82 (63.41%), Postives = 59/82 (71.95%), Query Frame = 0
Query:    1 MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCRMCDVNYEMTINYLTEPIDVYTDWIDECEAVNA 82
            MGRRK STKKI  KK  TLD  FKCPFC HDKVV+CTMN K+    L CR CD  Y   INYL+EPID++T+WID  EA +A
Sbjct:    1 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHA 82          
BLAST of mRNA_Ecto-sp9_F_contig892.17108.1 vs.
Match: Transcription (elongation factor 1 homolog n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LI04_9STRA)

HSP 1 Score: 108 bits (271), Expect = 5.070e-29
Identity = 48/81 (59.26%), Postives = 61/81 (75.31%), Query Frame = 0
Query:    1 MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCRMCDVNYEMTINYLTEPIDVYTDWIDECEAVN 81
            MGRRK STKKIV +K   + +VFKCPFC+HD  V+C M++      L CR+C  +Y+  INYL+EPIDVYTDWIDECEA++
Sbjct:    1 MGRRKTSTKKIVTRKKQVVARVFKCPFCSHDDSVQCKMDRDRNVGHLSCRVCSESYQTNINYLSEPIDVYTDWIDECEALH 81          
BLAST of mRNA_Ecto-sp9_F_contig892.17108.1 vs.
Match: Transcription (elongation factor 1 homolog n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SPD8_9STRA)

HSP 1 Score: 108 bits (270), Expect = 2.480e-28
Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = 0
Query:    1 MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCRMCDVNYEMTINYLTEPIDVYTDWIDECEAVNA 82
            MGRRKKSTKKI  +K   +  VFKCPFC+HD+ VEC M+++     L CR+C  +++  I+YL+ PIDVYTDWIDECEA+NA
Sbjct:   46 MGRRKKSTKKIQTRKKQVVSTVFKCPFCSHDEAVECKMDRERNIGHLSCRVCTESFQTPIHYLSAPIDVYTDWIDECEALNA 127          
BLAST of mRNA_Ecto-sp9_F_contig892.17108.1 vs.
Match: Transcription (elongation factor 1 homolog n=16 Tax=Oomycota TaxID=4762 RepID=M4B5A6_HYAAE)

HSP 1 Score: 107 bits (266), Expect = 2.760e-28
Identity = 46/82 (56.10%), Postives = 62/82 (75.61%), Query Frame = 0
Query:    1 MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCRMCDVNYEMTINYLTEPIDVYTDWIDECEAVNA 82
            MGRRKK+TKK+  +K   +  VFKCPFC+HD+ VEC M+++     L CR+C  +++  I+YL+ PIDVYTDWIDECEA+NA
Sbjct:    1 MGRRKKATKKVQTRKKQAVSTVFKCPFCSHDEAVECKMDRERNIGHLSCRVCTESFQTPIHYLSAPIDVYTDWIDECEALNA 82          
BLAST of mRNA_Ecto-sp9_F_contig892.17108.1 vs.
Match: Transcription (elongation factor 1 homolog n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3LNQ0_9STRA)

HSP 1 Score: 108 bits (269), Expect = 4.170e-28
Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = 0
Query:    1 MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCRMCDVNYEMTINYLTEPIDVYTDWIDECEAVNA 82
            MGRRKKSTKKI  +K   +  VFKCPFC+HD+ VEC M+++     L CR+C  +++  I+YL+ PIDVYTDWIDECEA+NA
Sbjct:   52 MGRRKKSTKKISTRKKQIVSTVFKCPFCSHDEAVECKMDRERNIGHLSCRVCTESFQTPIHYLSAPIDVYTDWIDECEALNA 133          
BLAST of mRNA_Ecto-sp9_F_contig892.17108.1 vs.
Match: Uncharacterized (protein n=15 Tax=Phytophthora TaxID=4783 RepID=H3HB17_PHYRM)

HSP 1 Score: 108 bits (270), Expect = 6.300e-26
Identity = 48/82 (58.54%), Postives = 62/82 (75.61%), Query Frame = 0
Query:    1 MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCRMCDVNYEMTINYLTEPIDVYTDWIDECEAVNA 82
            MGRRKKSTKKI  +K   +  VFKCPFC+HD+ VEC M+++     L CR+C  +++  I+YL+ PIDVYTDWIDECEA+NA
Sbjct:  310 MGRRKKSTKKIQTRKKQVVSTVFKCPFCSHDEAVECKMDRERNIGHLSCRVCTESFQTPIHYLSAPIDVYTDWIDECEALNA 391          
BLAST of mRNA_Ecto-sp9_F_contig892.17108.1 vs.
Match: Transcription (elongation factor 1 homolog n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J6E9_PLABS)

HSP 1 Score: 97.1 bits (240), Expect = 2.870e-24
Identity = 46/82 (56.10%), Postives = 54/82 (65.85%), Query Frame = 0
Query:    1 MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCRMCDVNYEMTINYLTEPIDVYTDWIDECEAVNA 82
            MG+RK S K++V K    L   F CPFCNH   VEC M + E  A + CR+CD NY M IN LTEP+DVY +WIDECE  NA
Sbjct:    1 MGKRK-SKKRVVRKVVDKLATAFDCPFCNHSLTVECKMKRSENVAEISCRICDANYRMPINSLTEPVDVYCEWIDECEQANA 81          
BLAST of mRNA_Ecto-sp9_F_contig892.17108.1 vs.
Match: transcription (elongation factor 1 homolog n=2 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC465E2)

HSP 1 Score: 97.1 bits (240), Expect = 4.130e-24
Identity = 44/84 (52.38%), Postives = 56/84 (66.67%), Query Frame = 0
Query:    1 MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCRMCDVNYEMTINYLTEPIDVYTDWIDECEAVNAVD 84
            MG+RK S K    KK   L+ VF CPFCNH+K V CT+++KE    L C +C   Y   IN L+EPID+Y++WIDECE VN +D
Sbjct:    1 MGKRKSSAKPAPKKKMEKLESVFNCPFCNHEKSVNCTIDRKEMIGELTCCICQEKYSTAINNLSEPIDIYSEWIDECEKVNDMD 84          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig892.17108.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Transcription1.140e-70100.00elongation factor 1 homolog n=2 Tax=Ectocarpus Tax... [more]
Transcription2.510e-2958.54elongation factor 1 homolog n=3 Tax=Aphanomyces Ta... [more]
Transcription4.870e-2963.41elongation factor 1 homolog n=1 Tax=Tribonema minu... [more]
Transcription5.070e-2959.26elongation factor 1 homolog n=6 Tax=Saprolegniacea... [more]
Transcription2.480e-2858.54elongation factor 1 homolog n=2 Tax=Phytophthora T... [more]
Transcription2.760e-2856.10elongation factor 1 homolog n=16 Tax=Oomycota TaxI... [more]
Transcription4.170e-2858.54elongation factor 1 homolog n=1 Tax=Phytophthora f... [more]
Uncharacterized6.300e-2658.54protein n=15 Tax=Phytophthora TaxID=4783 RepID=H3H... [more]
Transcription2.870e-2456.10elongation factor 1 homolog n=1 Tax=Plasmodiophora... [more]
transcription4.130e-2452.38elongation factor 1 homolog n=2 Tax=Telopea specio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038567Transcription elongation factor 1 superfamilyGENE3D2.20.25.190coord: 23..84
e-value: 4.6E-27
score: 95.7
IPR007808Transcription elongation factor 1PFAMPF05129Elf1coord: 2..78
e-value: 7.2E-29
score: 99.7
IPR007808Transcription elongation factor 1PANTHERPTHR20934UNCHARACTERIZEDcoord: 1..94
NoneNo IPR availableSUPERFAMILY57783Zinc beta-ribboncoord: 1..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig892contigEcto-sp9_F_contig892:18256..21217 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig892.17108.1mRNA_Ecto-sp9_F_contig892.17108.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig892 18256..22280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig892.17108.1 ID=prot_Ecto-sp9_F_contig892.17108.1|Name=mRNA_Ecto-sp9_F_contig892.17108.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=106bp
MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCR
MCDVNYEMTINYLTEPIDVYTDWIDECEAVNAVDAAAEEHKDDEQFIDDQ
EIAEG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038567T_Elf1_sf
IPR007808Elf1