mRNA_Ecto-sp9_F_contig891.17098.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_Ecto-sp9_F_contig891.17098.1
Unique Name	mRNA_Ecto-sp9_F_contig891.17098.1
Type	mRNA
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)

Homology

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BLAST of mRNA_Ecto-sp9_F_contig891.17098.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6T8_ECTSI)

HSP 1 Score: 877 bits (2265), Expect = 2.230e-311
Identity = 453/459 (98.69%), Postives = 456/459 (99.35%), Query Frame = 1

Query:  520 MLALPVLGRLLGNSANLFQVGVLLGTIPTLLAGVVCFYWAYQVIVTGSPDYQSRKLAENIKTSRLPPAKVGPGNPGFVDRPKLLDADALRREVQSRYNPTLLVHGERGSGKTVAVRLALHSSESVVHVKLWGKDVSRPLFALAQAIIDTTSVQVTAPGSAPLIVESALRNIKGRGWKPGGASVPIVVVELDKRCSDTDLLGVLLACKRWGDDENLAKFVVEAPSARIARGLPISLSDLRVEGVKMRPLAPSEAQQVAVGCVPIAASRNWKGGRQEDLAKYIVSKVGLGMLDLVRVGFAARNARDPLALHASVNRFATRESRAARGGVKAFLVSLRTELERKGGGSVHGPGEEDFERRLWRAIEGGAARAEGRGGKNPGLDEVLETIGVSERAFESAVRGVGPASPLSVDPFSYKVSIRSLFFRNALEATVVAKAKEKEELRSGDEPVENERVAAAEPSL 1896
            MLALPVLGRLLGNSANLFQVGVLLGTIPTLLAGVVCFYWAYQVIVTGSPDYQSRKLAENIKTSRLPPAKVGPGNPGFVDRPKLLDADALRREVQSRYNPTLLVHGERGSGKTVAVRLALHSSESVVHVKLWGKDVSRPLFALAQAIIDT+SVQVTAPGSAPL+VESALRNIKGRGWKPGGASVPIVVVELDKRCSDTDLLGVLLACKRWGDDENLAKFVVEAPSARIARGLPISLSDLRVEGVKMRPLAPSEAQQVAVGCVPIAASRNWKGGRQEDLAKYIVSKVGLGMLDLVRVGFAARNARDPLALHASVNRFATRESRAARGGVKAFLVSLRTELERKGGGSVHGPGEED ERRLWRAIEG AARA+GRGGK PGLDEVLETIGVSERAFESAVRGVGPASPLSVDPFSYKVSIRSLFFRNALEATVVAKAKEKEELRSGDEPVENERVAAAEPSL
Sbjct:    1 MLALPVLGRLLGNSANLFQVGVLLGTIPTLLAGVVCFYWAYQVIVTGSPDYQSRKLAENIKTSRLPPAKVGPGNPGFVDRPKLLDADALRREVQSRYNPTLLVHGERGSGKTVAVRLALHSSESVVHVKLWGKDVSRPLFALAQAIIDTSSVQVTAPGSAPLVVESALRNIKGRGWKPGGASVPIVVVELDKRCSDTDLLGVLLACKRWGDDENLAKFVVEAPSARIARGLPISLSDLRVEGVKMRPLAPSEAQQVAVGCVPIAASRNWKGGRQEDLAKYIVSKVGLGMLDLVRVGFAARNARDPLALHASVNRFATRESRAARGGVKAFLVSLRTELERKGGGSVHGPGEEDIERRLWRAIEGAAARADGRGGKKPGLDEVLETIGVSERAFESAVRGVGPASPLSVDPFSYKVSIRSLFFRNALEATVVAKAKEKEELRSGDEPVENERVAAAEPSL 459

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BLAST of mRNA_Ecto-sp9_F_contig891.17098.1 vs.
Match: Uncharacterized (protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F6C6_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 6.620e-9
Identity = 71/265 (26.79%), Postives = 119/265 (44.91%), Query Frame = 1

Query:  748 FVDRPKLLDADALRREVQSRYNPTLLVHGERGSGKTVAVRLALHSSESVVHVKLWGKDVSRPLFALAQAIIDTTSVQVTAPGSAPLIVESALRNIKGRGWKPGGASVPIVVVELDKRCSDTDLLGVLLACKRWGDDENLAK-----FVVEAPSARIARGLPISLSDLRVEGVKMRPLAPSEAQQVAVGCVPIAASRNWKGGRQEDLAKYIVSKVGLGMLDLVRVGFAARNAR--DPLALHASVNRFATRESRAARGGVKAFLVSL 1521
            FV RP L     L   +Q   + T+L++G+RGSGKT  +R AL     V+ +++  K         ++ +I+  S QV   G+   +V   + ++      P     PI+VV +D RC    L  VL+ CK +  + +  +     F+V+   +R A     ++  LRV G+++      EA   A   +P +        R+ ++A  +V K    +  L RV  A RN    D   + A++ R   +E + A  G  +F  SL
Sbjct:   52 FVKRPTL--QGILSTALQETGSKTVLLYGQRGSGKTSFIRYALKGRRGVLSIQITKKTHDEA----SKELIEKMSSQVDLLGTQQDLV--FMEDVFAACRVP-----PIIVVTMDARCKGEVLEAVLILCKSFSYENSFRRGKQPRFLVDISFSRAAIDASSNIEVLRVVGIQVGNFPRDEALLYATERMPASLKDR---RRRHEIAMSVVEKFDCNVYTLQRVCKALRNGHPTDVSTVAATIERELRKEQQWAARGWYSFCCSL 300

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BLAST of mRNA_Ecto-sp9_F_contig891.17098.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHU7_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 5.520e-8
Identity = 86/340 (25.29%), Postives = 129/340 (37.94%), Query Frame = 1

Query:  811 NPTLLVHGERGSGKTVAVRLALHSSESVVHVKLWGKDVSRPLFALAQAIIDTTSVQVTAPGSAPLI-VESALRNIKGRGWKPGGASVPIVVVELDKRCSDTDLLGVLLACKRWGDDENLAKFVVEAPSARIARGLPISLSDLRVEGVKMRPLAPSEAQQVAVGCVPIAASRNWKGGRQEDLAKYIVSKVGLGMLDLVRVGFAARNARDPLALHASVNRFATRESRAARGGVKAF--LVSLRTELERKGGGSVHGPGEEDFERRLWRAIEGGAARAEGRGGKNPGLDEVLETIGVSERAFESAVRGVGPASPLSVDPFSYKVSIRSLFFRNALEATVVAKA 1821
            NP+LLV+G RG GKT  V  AL     V+ +   G         L Q +          PG  P   +   LR I     K      P+VV+ +D+R +   L  +LLA ++ G  E LA F+    + R A GLPI LS  +V G +       EA       +P              +A++ V ++G   +DLV +  A R         A V          AR  ++ F  +       E K G +        F  +L  A  G AA A      +  L +    +          +  +       VDPF + +S++S   R A++  + A A
Sbjct:  105 NPSLLVYGARGGGKTSIVEAALQGIAGVLAMSYNGDGTD-----LEQRLEQLLLKPAGLPGHGPKADLGDRLRAILTFYQKVYDRR-PVVVIHIDERTAPATLSKLLLAAEQLGFQEKLATFIFVVSAYRSALGLPIGLSQTQVLGYRAPDFTEDEALAYLAKHLPSCPG----------MAEFAVQQIGTRAMDLVELCSACRGVESETECRARVAALRAMRIGDARFALRGFVGIAKKNKAFEEKAGLA--------FFEKLLAAHGGDAALARACVLDDDVLTDYHAAVAFGFEKPALLLSALAEYHAFVVDPFYHTISMQSHCMRIAIQEYLQAVA 420

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BLAST of mRNA_Ecto-sp9_F_contig891.17098.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEX4_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 3.950e-7
Identity = 80/332 (24.10%), Postives = 134/332 (40.36%), Query Frame = 1

Query:  805 RYNPTLLVHGERGSGKTVAVRLALHSSESVVHVKLWGKDVSRPLFALAQAIIDTTSVQVTAPGSAPLIVESALRNIKGRGWKPGGASVPIVVVELDKRCSDTDLLGVLLACKRWGDDENLAKFVVEAPSARIARGLPISLSDLRVEGVKMRPLAPSEAQQVAVGCVPIAASRNWKGGRQEDLAKYIVSKVGLGMLDLVRVGFAARNARDPLALHASVNRFATRESRAARGGVKAFLVSLRTELERKGGGSVHGPGEEDFERRLWRAIEGGAARAEGRGGKNPGLDEVLETIGVSERAFESAVRGVGPASPLSVDPFSYKVSIRSLFFRNALE 1800
            + NP+LLV+G RG GKT  V  AL  +  V+ +   G         L Q ++    +    P +    +   LR I    ++      P+VV+++++R     L  +LLA K+ G  E LA F+    ++R A GL I +   RV G +    +  EA       +P              +A+++V ++G   +DLV +    R           V  +     + AR  ++ F+   +         SV       F R+L  A    AA A   G      D   +  G  E   E  +  +      ++DPF + +S++S F + A+E
Sbjct:   44 KQNPSLLVYGARGVGKTSLVEAALQGTAGVLGMSYNGDGTDLEQ-RLEQLLLKLAGLPEHGPKAD---LGDRLRAIL-TFYQIVHKRRPVVVIDINERTGPATLSKLLLAAKQLGFQEKLATFIFVVSASRSALGLTIGIRQSRVRGYRAPDFSEDEALAYLAKHLPPFPG----------MAEFVVQQIGTRAMDLVELCSECRGVELEPECRERVEAYREACIKDARFALRGFVAIAKKNEAFSKEASVA------FFRQLLAADSDDAALA---GTCVLDDDYAADAFGFEEP--ELLLLALAKYHAFAIDPFDHTISMQSHFMQTAIE 349

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig891.17098.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig891.17098.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
Uncharacterized	2.230e-311	98.69	protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6T8...	[more]
Uncharacterized	6.620e-9	26.79	protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 ...	[more]
Uncharacterized	5.520e-8	25.29	protein n=1 Tax=Tribonema minus TaxID=303371 RepID...	[more]
Uncharacterized	3.950e-7	24.10	protein n=1 Tax=Tribonema minus TaxID=303371 RepID...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig891	contig	Ecto-sp9_F_contig891:5308..12980 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	chloroplast
Ec32 ortholog description	expressed unknown protein
Ec32 ortholog	Ec-01_012290.1
Exons	4
Model size	3154
Cds size	1821
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig891.17098.1	prot_Ecto-sp9_F_contig891.17098.1	Ectocarpus species9 EcSCA_722f female	polypeptide	Ecto-sp9_F_contig891 5386..11725 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930948.31136-UTR-Ecto-sp9_F_contig891:5307..5385	1622930948.31136-UTR-Ecto-sp9_F_contig891:5307..5385	Ectocarpus species9 EcSCA_722f female	UTR	Ecto-sp9_F_contig891 5308..5385 +
1692278962.6186488-UTR-Ecto-sp9_F_contig891:5307..5385	1692278962.6186488-UTR-Ecto-sp9_F_contig891:5307..5385	Ectocarpus species9 EcSCA_722f female	UTR	Ecto-sp9_F_contig891 5308..5385 +
1622930948.4335709-UTR-Ecto-sp9_F_contig891:11725..12980	1622930948.4335709-UTR-Ecto-sp9_F_contig891:11725..12980	Ectocarpus species9 EcSCA_722f female	UTR	Ecto-sp9_F_contig891 11726..12980 +
1692278962.6743236-UTR-Ecto-sp9_F_contig891:11725..12980	1692278962.6743236-UTR-Ecto-sp9_F_contig891:11725..12980	Ectocarpus species9 EcSCA_722f female	UTR	Ecto-sp9_F_contig891 11726..12980 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930948.3304238-CDS-Ecto-sp9_F_contig891:5385..5751	1622930948.3304238-CDS-Ecto-sp9_F_contig891:5385..5751	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig891 5386..5751 +
1692278962.6291625-CDS-Ecto-sp9_F_contig891:5385..5751	1692278962.6291625-CDS-Ecto-sp9_F_contig891:5385..5751	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig891 5386..5751 +
1622930948.3488903-CDS-Ecto-sp9_F_contig891:7541..7742	1622930948.3488903-CDS-Ecto-sp9_F_contig891:7541..7742	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig891 7542..7742 +
1692278962.639707-CDS-Ecto-sp9_F_contig891:7541..7742	1692278962.639707-CDS-Ecto-sp9_F_contig891:7541..7742	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig891 7542..7742 +
1622930948.3669832-CDS-Ecto-sp9_F_contig891:8622..9228	1622930948.3669832-CDS-Ecto-sp9_F_contig891:8622..9228	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig891 8623..9228 +
1692278962.6550035-CDS-Ecto-sp9_F_contig891:8622..9228	1692278962.6550035-CDS-Ecto-sp9_F_contig891:8622..9228	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig891 8623..9228 +
1622930948.4165525-CDS-Ecto-sp9_F_contig891:11077..11725	1622930948.4165525-CDS-Ecto-sp9_F_contig891:11077..11725	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig891 11078..11725 +
1692278962.6644402-CDS-Ecto-sp9_F_contig891:11077..11725	1692278962.6644402-CDS-Ecto-sp9_F_contig891:11077..11725	Ectocarpus species9 EcSCA_722f female	CDS	Ecto-sp9_F_contig891 11078..11725 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at Ecto-sp9_F_contig891:5308..12980+
coding sequence from alignment at Ecto-sp9_F_contig891:5308..12980+

protein sequence of mRNA_Ecto-sp9_F_contig891.17098.1

>prot_Ecto-sp9_F_contig891.17098.1 ID=prot_Ecto-sp9_F_contig891.17098.1|Name=mRNA_Ecto-sp9_F_contig891.17098.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=607bp
MALKLQLLLLVGIFCNADGFQTSCCAAGSRGSAFSPTQGRGRSRCLTPPP
AIPSASAKPRPRSVARVNARMSHNTLRTGGYLRSFRGLIAHFRQIHRSRS
VPAAAAAAAGRRRAGSLPPLPSARHCGTAARAQARTELDQLPKHQGAMLA
LPVLGRLLGNSANLFQVGVLLGTIPTLLAGVVCFYWAYQVIVTGSPDYQS
RKLAENIKTSRLPPAKVGPGNPGFVDRPKLLDADALRREVQSRYNPTLLV
HGERGSGKTVAVRLALHSSESVVHVKLWGKDVSRPLFALAQAIIDTTSVQ
VTAPGSAPLIVESALRNIKGRGWKPGGASVPIVVVELDKRCSDTDLLGVL
LACKRWGDDENLAKFVVEAPSARIARGLPISLSDLRVEGVKMRPLAPSEA
QQVAVGCVPIAASRNWKGGRQEDLAKYIVSKVGLGMLDLVRVGFAARNAR
DPLALHASVNRFATRESRAARGGVKAFLVSLRTELERKGGGSVHGPGEED
FERRLWRAIEGGAARAEGRGGKNPGLDEVLETIGVSERAFESAVRGVGPA
SPLSVDPFSYKVSIRSLFFRNALEATVVAKAKEKEELRSGDEPVENERVA
AAEPSL*

mRNA from alignment at Ecto-sp9_F_contig891:5308..12980+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_Ecto-sp9_F_contig891.17098.1 ID=mRNA_Ecto-sp9_F_contig891.17098.1|Name=mRNA_Ecto-sp9_F_contig891.17098.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=7673bp|location=Sequence derived from alignment at Ecto-sp9_F_contig891:5308..12980+ (Ectocarpus species9 EcSCA_722f female)
ACAGCTCGTTCCACCTCTGAGCCGTCGCTGCCTCGCTCCCCTTTGCCCAC
CACCCTCCCTTGTTGGTGTGGCAGAGGGATGGCACTCAAGCTGCAGCTCT
TGCTGCTGGTGGGGATCTTTTGCAATGCCGACGGATTTCAAACATCCTGT
TGTGCGGCGGGTTCACGAGGTTCCGCCTTCAGCCCTACCCAAGGTCGCGG
AAGGAGCCGGTGCTTGACTCCGCCGCCAGCCATACCAAGTGCAAGTGCGA
AGCCCCGGCCAAGGTCGGTGGCTCGAGTCAACGCCAGAATGAGTCACAAC
ACGCTGCGCACTGGCGGGTACCTGCGCAGCTTTCGCGGCCTTATCGCACA
TTTCCGGCAGATTCACCGAAGCAGAAGCGTACCAGCAGCGGCAGCAGCAG
CAGCAGGAAGACGGCGGGCTGGATCTCTTCCGCCGCTACCTTCGGTGAGA
GAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGACAGAAACAGA
GACAGAGACAGAGAGAGGTGCACACAGAGAGCTCGTGCAGGAGAACTGGG
CATGCTGCCTTTCAAACGTGACACAGCAATACTGCTGTACCAGTACATGT
GTTGTCAAGTTGCCGCAATAGAGCGGGTGTGTGTCGTGCTGCTGTACTGG
AATACTCTACGGCTGGTGTCTCGCCGCATTGTTCTCGTTCAACAAGTCGC
GAAAAATGTTCATGTGTCATTTTTGCCAGTCCGAATTGCGCGCGTGTGTC
CATTACAAGCTACGGCATATCCGGGCAGCTTGTCCTTGTCGATCATGGTC
AAGTGAGCTGTTTGCCAGTGCGGCCGTCTGTGCATCGTGTATGTATGAAT
GCCCAGACCAAGTCTTACGTGTACACACATGTAGAATATCTTCAGAAGGT
AATGTAGCAACTACTGCTGTAGCAGCGCGAAGAAACTGCGGTGGAAGGTG
TCGAATACTGCTGTGTCTGCGCGTCTGCGTGGCTAACGTTGTCCTTTCTC
CGCAGCCAAAGCCGAAGTCAAAGTAAAATAAAATCACAGCATGTAGAATG
CTGATTTAAGACGATGATCTGTTTGCACACGCCTTTCCTTCTTTTGATGT
GCATAGCCCTTCTCACAACTCCAGGGCGGGTGACGGGGTTGATCAAAAAG
ACACAGCTACTGTACATGCCTTGCGGGCCAGCAGTCAAAGAATCTTGCCG
TTTATACCTGCAAGGCTCAAACATTCACGAAAATTGGGAAGAAAATTGAG
AAAATCGGGTTATGAAACACAACTCCGCCGAGCATCCTACACTAATTCTA
CTATTATTTTATTATAACCTATTCTGGACGGCGGTGGCGAAAGGAGACAA
TGAGCCCCGACCTCGACCCAAAGTTGTAATTTCTTTCTCCGGGGGGCCTA
GTCTACTGCTGTACATTGTCGTAGGCGAAATCTTGAGCACCACGGGTTGA
CGATGAAAATCAACACTCCATTTTTTGTTGAGGAGTGCAACGATAGTATT
CACAGAGGCCTGTTCGTTCCCGGCTCAGGCAGGGTTTGAGATAACGGAAA
ATTTTCTTGTTGCGATGAGTGCGGAAGAGGTCAGAAAGGGATCCATAGAT
GGAAACAATAACAAGAGATGGAGATTAAGAAAGACACGGCGGTTTTTCAC
GCTCCAACGGTCGCCACGCGAGGCCCGGCAGGGCATAGCGGGGGCAAGCT
ACGGTCTCGCAGCACACCGCTGTACCTCATTGAAATCTGGATGAGGGTAA
TTATTAATAGCAGCATTGTTCCTGGCCTCCCCCGCTGTTTTTCTCGGCAT
TCACTAACGAGCCTGGGGTATATTCAAGTACTACTCCTGTCAATTTTTAT
CACGGTGTTGAATAGCAGGCCATGAGCGAGATACACCGCCGTGCATGTAG
CTTGTTCTTCGGCGTTTTGAAGCGTCGTGAAAGCAAGGGAGCTGTTCGGG
CTCTACTTTCTCTAGCTGACGGCTCTGTCCATGCTCGGTGGAGCTGACCA
AGGGGCAAGTGTGTCACCACAGCAGGGCTTGAGCACCTGCAGGCGATGGT
CCACCTCCCATGGCCTGCCGAACAAAGAGCATCTGAAATACGGCAGGGTA
TTCTTCAGGTAAGGAAAAAAAACGGCTGAAAATATTCCCAACAAGTGCGT
ATGCTTTGTTGAACCCAAAGTGGGTTGTGAAGATTTGACGTTTCATTCCG
ACCGTCTGCCCCTGGTTGTTTTCTTTGGTTACAGGCCCGGCATTGCGGAA
CAGCAGCGAGAGCACAAGCAAGAACAGAGCTGGACCAGCTGCCGAAGCAC
CAGGGTGCCATGCTGGCCCTCCCGGTACTTGGTCGCTTGCTTGGAAACTC
GGCGAACCTCTTCCAGGTTGGGGTTCTCCTCGGAACAATCCCAACACTCC
TTGCCGGCGTGGTCTGCTTCTACTGGGCATATCAGGTGCGGTTATCGGTC
ATCTCTGCTGTCTGGGCGGCCCGTACGTAGCACCTAGCCCAGAGAGCATG
TGGTAGTGCTGCGATAATTTGACATCTATGGTTGCCTAGAAGTACCATCG
TGGGCGGCAACCTGACTCTCTCTCGCAGGTACGTGCAAGACCGGTGCGTT
TGGTTCACGTTTTCGCGCGGAACGCGTCTAGCCACGAGCAGCTGCTATTT
GTATGACATGGCGGCATCTCACCATTGTTATTTTTTTTTTTTGTCAACCG
AGAACGTGAAGAGGCCGTCACTTACCACTGTACGTCATGGCTACAGCCGC
TCTAGAGAACGATCTACTGTAGGCTATGTACCCGATCAAGGCCCGGCGGG
TCGGTCGTGTCGACGTGTTTCCTCGAACCCGATGTTCCCTTCAAAGGTCC
TTGTTCCTAATGCTTATACAATATGCACACCCTAAAGATAATTTCTCCCT
CTAGTCCACTTTTTTTGAATTGAGGCTCCGTGGCATGATACTGTACAAGC
GTTTAAAACCCCGTCCGTTCGTAGTACCGGGCGGTAGCGAAGAGTTTCGT
GTGCCGGAGACATGGTGTGATTTGGTTTGCATGCATGTATGCATATGAAT
AGAAGCCAGCCTACAGCATTAGCGTTCTGTGGTTACAGTAGGTCGTTTGG
TATGCTAACACACCGACCCAGCTGGTCTACCGGGTTATGCACCTGTACCC
ATAGTTTTTCCTTTCTTTGTATTATCTTGGCTCAGAGAAGGTCATGCCTG
CTGTTAAGCTCGACTAGCCTGACGTCGACCTCGCCCCTAAACTGCTGTTG
GCGTTATGGTCCAGCCCGGCTAAACTTTCACCCGCTGCCATGTGGTCATC
GTTATCGTCGGCCAGGTTATCGTCACGGGTTCCCCAGACTATCAGAGCCG
AAAGCTGGCAGAGAACATCAAGACATCCCGCCTGCCGCCAGCGAAGGTGG
GGCCTGGAAACCCTGGGTTCGTCGATCGACCCAAGCTCCTGGACGCGGAC
GCGCTGAGACGAGAAGTGCAGTCTCGCTACAACCCGACGCTGCTCGTCCA
CGGCGAGAGGGGCTCCGGAAAGACGGTAGCAGTTCGCCTTGCGCTCCACT
CGAGCGAGTCTGTGGTTCACGTCAAGCTGTGGGGGAAGGACGTGTCCCGC
CCGCTTTTCGCTCTGGCCCAGGCAATAATCGACACCACCTCCGTGCAGGT
GACGGCCCCGGGGTCAGCGCCGCTTATTGTGGAGAGTGCGCTGAGAAATA
TCAAGGGTCGCGGCTGGAAACCGGGGGGGGCGTCCGTTCCCATTGTTGTG
GTGGAGCTGGATAAGAGGTGTTCGGATACTGACCTGCTGGGCGTGCTGCT
GGCATGCAAGCGCTGGGGTGACGACGAGAACCTGGCCAAGTTTGTGGTTG
AAGCGCCTTCCGCGCGAATCGCTCGAGGGCTGCCGATATCGCTGTCGGAT
CTACGGGTTGAAGGCGTCAAGGTGGGTCTTTTTTCGTTGATTTTCGGCGT
TTTTTTGTCGAGATTCCAGGCGCTGTGACGGTGCTGAAGAGCTCTTCGAG
TTCGTCACAAACGGTTTTCCTACACACGGTCGCTGCTGGGTATGATTTCT
CCGAAGTTTGTTCGTGTGTCTGCAAACCCGTGGAGGCTTTCGGCAATGTC
GTGGTCCACTCACACACGATAGGAATATATATGTATGATACAAGGTTCCC
CTTGCGGGAGTTAGGTGATTTGCCTCCCGGGGGCAACGCAAGACGACATG
GCCAATCAATGTAATCGCGGTCGCATGGTTGGTCATCATGACGTTCGGTA
GTGCCGTTTTGCGTGCAACCTGTATACCTACTAATTTGCCAGGAATTTGC
ATCATGTAAGGGGTATTCTGTAATCTCCCGCCGTGACTTTAGCTTGTGCG
CGAAGTGTGTTTTTTTATGTAGGCTAGCGCTGTCTTTGCTGCAGGTCCTA
CTGCTGGAAGCCGCTGCGTATGATCACTTACTCTTTTTGTGTGATCATGT
TTCCCATGTTCTGTGGAACTTTTTCACGGAAATACCAACAACGAATCAAA
GAGACGCTCAACGTGCCCTAGAACAGTCACAGACAGACAGACGTCTTTAG
ACTGCTTGCAGTAGTTTTGAATTTTTCGACTTTTCGGACTTGAAATTTAA
ATGACCGCGCTGCCAGAGTGAGTTGTGCGAGAGTACCTCTGTGTCGCGTG
GTGTGTTTCCATGAGCAACACCACGAGTCTTGGTCCCCGCTGCGGGTACG
CATGCCCCAGTTGCTGTGTGGCAGGGGTGTACGCAACAAGGTGTGTACAC
GACAATCACAGCAGCTGTGTGGGCGCGTGGGCGCGGGGCGCGTGGCGCGT
GGCAAAAAAAACTTCTGGTTTCAGTTTTCTTGCCGTTCGAGGAGGTCTTT
ATGGTTCGGATTCCCAACCCCTGAAAAAAGATCCAGTCCCAGCGAATTTA
GGCGGCCCGAACGCGCACCACCGGTGTCTCGCGAGCCCCACACGTAACGG
GGAATGTGCCGACGGGTCGTCTGCATGCCATGCGGAAGAAAGTGCCGAAA
AAAACGCTGTCCCAGCAGAGACAAAACGACACGAGCACCAAAAAAGTTGA
AATCGTACATATGCATATTTGTTTTTTTGACCATTTTTAATCAGCGCTCA
CACACAGCGTTTGTGCCTTGTAGGAGCTCCAATCCGTGGTCACACAGAAG
AACGGTTCCTCTCCCTGAGCCCCCCCCCCCACGCCTCTTGAGGGCTTGCC
TTCGATTTGTAACGCGAGAATACGGCCGCACTCACTGTCTTCCCTCGAAA
CGTACACACGAACTAGCGTTTTCCACGACCAGGAATAAATGGAAGCGAAA
GAAAAATGAATATGCTCAAGAAACACTCGCGTATGCGGTAGTCAAACCCC
TGACCGTGGGTGCAGAAGCTTGCGAGGATACCAACCAGACTACCCCGGGA
CGAATGGAATAGCCTTGGTGGTTAGATTTCGACTTCTGCTCCGGCAGAGC
CTGTCGTTCAGGATGAGAAAGTGTCTCCTCACAGTGTGGAACTATTGAGC
TGCACTGGGCCGCTCCCAACAAAGAATCGTTGTCGGTGTCACAAACTGCT
CGAAAGCGCGGTACTTCCGTCTACAAGAGTTGCTCCGCAGGGTGGACCGA
GTGGCTAAACAGACGCGTCTCCCTGAGCTAGCTCCCTTCGGGAGAGTCGT
TGTATGCACCCGATCGGCCGTGCCGTACCCAAAGAAGTATTGACTAACTC
ATCAATTCCGACGACTGACTCCAACACCGCCCCTCTCCCGTTAACATGCA
CCCCCCCGACTTGGCTGTAGATGCGTCCGCTGGCGCCGAGCGAGGCGCAG
CAAGTGGCGGTCGGATGCGTCCCCATCGCGGCGAGCCGAAATTGGAAGGG
AGGGCGACAGGAGGACCTTGCCAAGTACATCGTTTCGAAGGTTGGCTTGG
GCATGCTTGACCTCGTGCGTGTTGGGTTCGCCGCCCGAAACGCTCGAGAC
CCGTTGGCCCTGCACGCGTCGGTGAATCGTTTCGCGACGAGAGAGAGCCG
AGCGGCCCGTGGCGGGGTGAAGGCGTTCTTGGTCTCCCTTCGCACGGAGC
TGGAAAGGAAGGGGGGGGGGTCTGTTCACGGTCCGGGGGAAGAGGATTTC
GAGAGGCGGCTGTGGCGGGCTATCGAAGGCGGAGCGGCGCGGGCGGAGGG
CCGGGGCGGCAAGAACCCGGGACTGGACGAGGTGCTCGAAACTATCGGGG
TCTCGGAGCGCGCGTTCGAGTCGGCGGTTAGGGGGGTAGGGCCGGCGTCT
CCTCTCTCCGTAGATCCGTTCTCGTACAAGGTGTCGATCCGATCGCTGTT
CTTCAGGAACGCGTTGGAGGCGACAGTGGTGGCGAAGGCGAAAGAGAAGG
AGGAGTTGCGGAGTGGAGATGAGCCCGTCGAAAACGAGAGGGTGGCTGCT
GCTGAACCGAGTCTGTGACCTGCCTCAGCATCAACCATAGCCGGTGTGGA
CGAGGCGGTCGCCGTTTGTACGAGTATGACAACAACGTTGGGTCACGAAG
TGACTATTTACTTGTATGTATAGTGTCTATTTTATTTTTACCAAGGTGGC
GTCACCCCAGGCTTTGCATAGAGAGGTGCAAGGAAGTTGTGGTGATGGGT
GCTTCCAGGCTGCTGTATGTAGTCCAGGTGTGTCTCGATAAGCCCGCCAT
ACGGCTTACAGTGTCCCGGTCGCGTGATGTATGCTGGAGGTTTCTTTTTT
TTTTGGACTGCGACAGCTCGATGTGTAACGATGTCGGTTTTACCCTTACC
CTTACCCTTGCCTTCGTATCGCGAGTGGTTGGTCACCGTTGCGGGCACGC
GCAGTATGTGTCAGCACGCCGCCGCTGTAAGACACGTGCATGGATACATT
GAATGCAGCGTCGAGCGGCAGTGGAAGGGTTGATACCAAGTGTGTTTCAG
GCGCAGGTGCTACAGTACCTGCCTATGTACGATTTCTATACTCTGGTGTT
GTCCGTATGTAAATAACCCACACAGAGATCGTTTGTCTCCGGCATGAAGA
TAGTGTGTCCGCTGCTTGGTGAAGCTGTTTGTCTTCATCGCCGTAAGGTT
GGCTGTAGAGGGCGCCAGCCGATGTGTTGGGCAACGAGACACCGCCCTAC
ATTCGTATGCTGGTTGTTCCGGACTTTCATCGGATTGGATGGATACGTAT
GCCTCTCTACCCTAGCGGTAGCCTGGTGTCTCTTTTCCGAGTTCGCCCGT
GCATCTTTCGACAATTTATTTTGGTAGGCGCGCGCCTTCCTGGGCAATGA
AGTATCTCTACAAGTGTCAAACGCACGCCAGTGTCTTGCAATGTGTGGTT
GGTGGTGAAAGGCTTGTTTTGTTGCGATGCATGCTTGATTGGTTTTGCGT
GCAGGTCGTACAGCAGTACGTATTCCGTCTGTTCGTCTTGCATGGCAATG
GGAGAGTCTTGACTGACGAGTGTACGTGTACGTCCATCGGATGTGTCGCC
CGTGTGAAGGTCTCTTGGCTACTGAGTACCTATGTACTTTCACGTTCGTA
TGCGTATGTCGATGGGTGTATTTCCAACGGCGGTCATTGACACAGCAACA
CAGCGAGTAGCTTGACATCATTCTCTGGGTATGCATGCTGCTTGTGTACT
CCTTAATTTTTTTGTCAAGATGTCTATGTACTTCTGTGTAAATTTAGACC
AATTTTTCGTAAGTCCATCATCC

Coding sequence (CDS) from alignment at Ecto-sp9_F_contig891:5308..12980+

>mRNA_Ecto-sp9_F_contig891.17098.1 ID=mRNA_Ecto-sp9_F_contig891.17098.1|Name=mRNA_Ecto-sp9_F_contig891.17098.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=3642bp|location=Sequence derived from alignment at Ecto-sp9_F_contig891:5308..12980+ (Ectocarpus species9 EcSCA_722f female)
ATGGCACTCAAGCTGCAGCTCTTGCTGCTGGTGGGGATCTTTTGCAATGC
CGACGGATTTCAAACATCCTGTTGTGCGGCGGGTTCACGAGGTTCCGCCT
TCAGCCCTACCCAAGGTCGCGGAAGGAGCCGGTGCTTGACTCCGCCGCCA
GCCATACCAAGTGCAAGTGCGAAGCCCCGGCCAAGGTCGGTGGCTCGAGT
CAACGCCAGAATGAGTCACAACACGCTGCGCACTGGCGGGTACCTGCGCA
GCTTTCGCGGCCTTATCGCACATTTCCGGCAGATTCACCGAAGCAGAAGC
GTACCAGCAGCGGCAGCAGCAGCAGCAGGAAGACGGCGGGCTGGATCTCT
TCCGCCGCTACCTTCGATGGCACTCAAGCTGCAGCTCTTGCTGCTGGTGG
GGATCTTTTGCAATGCCGACGGATTTCAAACATCCTGTTGTGCGGCGGGT
TCACGAGGTTCCGCCTTCAGCCCTACCCAAGGTCGCGGAAGGAGCCGGTG
CTTGACTCCGCCGCCAGCCATACCAAGTGCAAGTGCGAAGCCCCGGCCAA
GGTCGGTGGCTCGAGTCAACGCCAGAATGAGTCACAACACGCTGCGCACT
GGCGGGTACCTGCGCAGCTTTCGCGGCCTTATCGCACATTTCCGGCAGAT
TCACCGAAGCAGAAGCGTACCAGCAGCGGCAGCAGCAGCAGCAGGAAGAC
GGCGGGCTGGATCTCTTCCGCCGCTACCTTCGGCCCGGCATTGCGGAACA
GCAGCGAGAGCACAAGCAAGAACAGAGCTGGACCAGCTGCCGAAGCACCA
GGGTGCCATGCTGGCCCTCCCGGTACTTGGTCGCTTGCTTGGAAACTCGG
CGAACCTCTTCCAGGTTGGGGTTCTCCTCGGAACAATCCCAACACTCCTT
GCCGGCGTGGTCTGCTTCTACTGGGCATATCAGGCCCGGCATTGCGGAAC
AGCAGCGAGAGCACAAGCAAGAACAGAGCTGGACCAGCTGCCGAAGCACC
AGGGTGCCATGCTGGCCCTCCCGGTACTTGGTCGCTTGCTTGGAAACTCG
GCGAACCTCTTCCAGGTTGGGGTTCTCCTCGGAACAATCCCAACACTCCT
TGCCGGCGTGGTCTGCTTCTACTGGGCATATCAGGTTATCGTCACGGGTT
CCCCAGACTATCAGAGCCGAAAGCTGGCAGAGAACATCAAGACATCCCGC
CTGCCGCCAGCGAAGGTGGGGCCTGGAAACCCTGGGTTCGTCGATCGACC
CAAGCTCCTGGACGCGGACGCGCTGAGACGAGAAGTGCAGTCTCGCTACA
ACCCGACGCTGCTCGTCCACGGCGAGAGGGGCTCCGGAAAGACGGTAGCA
GTTCGCCTTGCGCTCCACTCGAGCGAGTCTGTGGTTCACGTCAAGCTGTG
GGGGAAGGACGTGTCCCGCCCGCTTTTCGCTCTGGCCCAGGCAATAATCG
ACACCACCTCCGTGCAGGTGACGGCCCCGGGGTCAGCGCCGCTTATTGTG
GAGAGTGCGCTGAGAAATATCAAGGGTCGCGGCTGGAAACCGGGGGGGGC
GTCCGTTCCCATTGTTGTGGTGGAGCTGGATAAGAGGTGTTCGGATACTG
ACCTGCTGGGCGTGCTGCTGGCATGCAAGCGCTGGGGTGACGACGAGAAC
CTGGCCAAGTTTGTGGTTGAAGCGCCTTCCGCGCGAATCGCTCGAGGGCT
GCCGATATCGCTGTCGGATCTACGGGTTGAAGGCGTCAAGGTTATCGTCA
CGGGTTCCCCAGACTATCAGAGCCGAAAGCTGGCAGAGAACATCAAGACA
TCCCGCCTGCCGCCAGCGAAGGTGGGGCCTGGAAACCCTGGGTTCGTCGA
TCGACCCAAGCTCCTGGACGCGGACGCGCTGAGACGAGAAGTGCAGTCTC
GCTACAACCCGACGCTGCTCGTCCACGGCGAGAGGGGCTCCGGAAAGACG
GTAGCAGTTCGCCTTGCGCTCCACTCGAGCGAGTCTGTGGTTCACGTCAA
GCTGTGGGGGAAGGACGTGTCCCGCCCGCTTTTCGCTCTGGCCCAGGCAA
TAATCGACACCACCTCCGTGCAGGTGACGGCCCCGGGGTCAGCGCCGCTT
ATTGTGGAGAGTGCGCTGAGAAATATCAAGGGTCGCGGCTGGAAACCGGG
GGGGGCGTCCGTTCCCATTGTTGTGGTGGAGCTGGATAAGAGGTGTTCGG
ATACTGACCTGCTGGGCGTGCTGCTGGCATGCAAGCGCTGGGGTGACGAC
GAGAACCTGGCCAAGTTTGTGGTTGAAGCGCCTTCCGCGCGAATCGCTCG
AGGGCTGCCGATATCGCTGTCGGATCTACGGGTTGAAGGCGTCAAGATGC
GTCCGCTGGCGCCGAGCGAGGCGCAGCAAGTGGCGGTCGGATGCGTCCCC
ATCGCGGCGAGCCGAAATTGGAAGGGAGGGCGACAGGAGGACCTTGCCAA
GTACATCGTTTCGAAGGTTGGCTTGGGCATGCTTGACCTCGTGCGTGTTG
GGTTCGCCGCCCGAAACGCTCGAGACCCGTTGGCCCTGCACGCGTCGGTG
AATCGTTTCGCGACGAGAGAGAGCCGAGCGGCCCGTGGCGGGGTGAAGGC
GTTCTTGGTCTCCCTTCGCACGGAGCTGGAAAGGAAGGGGGGGGGGTCTG
TTCACGGTCCGGGGGAAGAGGATTTCGAGAGGCGGCTGTGGCGGGCTATC
GAAGGCGGAGCGGCGCGGGCGGAGGGCCGGGGCGGCAAGAACCCGGGACT
GGACGAGGTGCTCGAAACTATCGGGGTCTCGGAGCGCGCGTTCGAGTCGG
CGGTTAGGGGGGTAGGGCCGGCGTCTCCTCTCTCCGTAGATCCGTTCTCG
TACAAGGTGTCGATCCGATCGCTGTTCTTCAGGAACGCGTTGGAGGCGAC
AGTGGTGGCGAAGGCGAAAGAGAAGGAGGAGTTGCGGAGTGGAGATGAGC
CCGTCGAAAACGAGAGGGTGGCTGCTGCTGAACCGAGTCTGTGAATGCGT
CCGCTGGCGCCGAGCGAGGCGCAGCAAGTGGCGGTCGGATGCGTCCCCAT
CGCGGCGAGCCGAAATTGGAAGGGAGGGCGACAGGAGGACCTTGCCAAGT
ACATCGTTTCGAAGGTTGGCTTGGGCATGCTTGACCTCGTGCGTGTTGGG
TTCGCCGCCCGAAACGCTCGAGACCCGTTGGCCCTGCACGCGTCGGTGAA
TCGTTTCGCGACGAGAGAGAGCCGAGCGGCCCGTGGCGGGGTGAAGGCGT
TCTTGGTCTCCCTTCGCACGGAGCTGGAAAGGAAGGGGGGGGGGTCTGTT
CACGGTCCGGGGGAAGAGGATTTCGAGAGGCGGCTGTGGCGGGCTATCGA
AGGCGGAGCGGCGCGGGCGGAGGGCCGGGGCGGCAAGAACCCGGGACTGG
ACGAGGTGCTCGAAACTATCGGGGTCTCGGAGCGCGCGTTCGAGTCGGCG
GTTAGGGGGGTAGGGCCGGCGTCTCCTCTCTCCGTAGATCCGTTCTCGTA
CAAGGTGTCGATCCGATCGCTGTTCTTCAGGAACGCGTTGGAGGCGACAG
TGGTGGCGAAGGCGAAAGAGAAGGAGGAGTTGCGGAGTGGAGATGAGCCC
GTCGAAAACGAGAGGGTGGCTGCTGCTGAACCGAGTCTGTGA