prot_Ecto-sp9_F_contig8847.17030.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8847.17030.1
Unique Nameprot_Ecto-sp9_F_contig8847.17030.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length148
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8847.17030.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J997_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 3.440e-59
Identity = 127/139 (91.37%), Postives = 129/139 (92.81%), Query Frame = 0 
Query:   13 GRG---VCRKLGQGEVGYVATTHTMSGVYRKWDCQRRNPVDTTWKTTPKNKEMYEDLTKRVVPGASKGQVAFQARGLDLNSNKASARAKPRGRRKAXXXXXXXXXXXXXXXXXXXAWEAASRKRRGQKETRVAPHSYVV 148
            GRG   VCRKLGQGEVGYVATTHTMSGVYRKWDCQRRNPVDTTWKTTPKNKE+ EDLTKRVVPGAS+GQVAFQARGLDLNSNKASA AKPRGRR  XXXXXXXXXXXXXXXXX   WEAASRKRRGQKETRVAPHSYVV
Sbjct:  851 GRGGVSVCRKLGQGEVGYVATTHTMSGVYRKWDCQRRNPVDTTWKTTPKNKEVDEDLTKRVVPGASRGQVAFQARGLDLNSNKASALAKPRGRRHGXXXXXXXXXXXXXXXXX---WEAASRKRRGQKETRVAPHSYVV 986
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BLAST of mRNA_Ecto-sp9_F_contig8847.17030.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG7_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 3.090e-27
Identity = 72/87 (82.76%), Postives = 73/87 (83.91%), Query Frame = 0 
Query:   62 MYEDLTKRVVPGASKGQVAFQARGLDLNSNKASARAKPRGRRKAXXXXXXXXXXXXXXXXXXXAWEAASRKRRGQKETRVAPHSYVV 148
            M EDLT RVVPGASKGQVAFQARGL+LNSNKASARAKPRGRRKAXXXXXXX            AWEAASRKRRGQKETRVAPHSYVV
Sbjct:    1 MDEDLTNRVVPGASKGQVAFQARGLELNSNKASARAKPRGRRKAXXXXXXXLRTVKEEKEE--AWEAASRKRRGQKETRVAPHSYVV 85
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8847.17030.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized3.440e-5991.37protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.090e-2782.76protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8847contigEcto-sp9_F_contig8847:71..1874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8847.17030.1mRNA_Ecto-sp9_F_contig8847.17030.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8847 71..1876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8847.17030.1 ID=prot_Ecto-sp9_F_contig8847.17030.1|Name=mRNA_Ecto-sp9_F_contig8847.17030.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=148bp
GQGRIEEAQIVSGRGVCRKLGQGEVGYVATTHTMSGVYRKWDCQRRNPVD
TTWKTTPKNKEMYEDLTKRVVPGASKGQVAFQARGLDLNSNKASARAKPR
GRRKAGGGGGGGGGLRAVKEEEEEAWEAASRKRRGQKETRVAPHSYVV
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